RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 RESP18Q5W5W9 173 aa19.04■□□□□ 0.64
HMGXB3-201ENST00000502717 MCM9Q9NXL9 1143 aa19.04■□□□□ 0.64
HMGXB3-201ENST00000502717 PPARDQ03181 441 aa19.04■□□□□ 0.64
HMGXB3-201ENST00000502717 TSGA10IPQ3SY00 556 aa19.04■□□□□ 0.64
HMGXB3-201ENST00000502717 DCAF17Q5H9S7 520 aaPredicted RBP19.04■□□□□ 0.64
HMGXB3-201ENST00000502717 ATP6V0A2Q9Y487 856 aa19.04■□□□□ 0.64
HMGXB3-201ENST00000502717 ABCA6Q8N139 1617 aa19.03■□□□□ 0.64
HMGXB3-201ENST00000502717 TNNI2P48788 182 aa19.03■□□□□ 0.64
HMGXB3-201ENST00000502717 CCDC38Q502W7 563 aa19.03■□□□□ 0.64
HMGXB3-201ENST00000502717 CEP128Q6ZU80 1094 aa19.03■□□□□ 0.64
HMGXB3-201ENST00000502717 UBL4BQ8N7F7 174 aa19.03■□□□□ 0.64
HMGXB3-201ENST00000502717 HINFPQ9BQA5 517 aa19.03■□□□□ 0.64
HMGXB3-201ENST00000502717 CHUKO15111 745 aa19.03■□□□□ 0.64
HMGXB3-201ENST00000502717 PPP4R3AQ6IN85 833 aa19.03■□□□□ 0.64
HMGXB3-201ENST00000502717 LRRC7Q96NW7 1537 aa19.03■□□□□ 0.64
HMGXB3-201ENST00000502717 PARP1P09874 1014 aaKnown RBP19.03■□□□□ 0.64
HMGXB3-201ENST00000502717 L2HGDHQ9H9P8 463 aa19.03■□□□□ 0.64
HMGXB3-201ENST00000502717 NLRC4Q9NPP4 1024 aa19.03■□□□□ 0.64
HMGXB3-201ENST00000502717 HOMER3Q9NSC5 361 aa19.03■□□□□ 0.64
HMGXB3-201ENST00000502717 FMNL1O95466 1100 aaPredicted RBP19.03■□□□□ 0.64
HMGXB3-201ENST00000502717 GSTA5Q7RTV2 222 aa19.03■□□□□ 0.64
HMGXB3-201ENST00000502717 SPATA24Q86W54 205 aa19.03■□□□□ 0.64
HMGXB3-201ENST00000502717 PARP2Q9UGN5 583 aa19.03■□□□□ 0.64
HMGXB3-201ENST00000502717 KCNK3O14649 394 aa19.02■□□□□ 0.64
HMGXB3-201ENST00000502717 ZNF772Q68DY9 489 aaPredicted RBP19.02■□□□□ 0.64
HMGXB3-201ENST00000502717 TUBGCP2Q9BSJ2 902 aa19.02■□□□□ 0.64
HMGXB3-201ENST00000502717 STAMBPO95630 424 aa19.02■□□□□ 0.64
HMGXB3-201ENST00000502717 PHKG2P15735 406 aa19.02■□□□□ 0.64
HMGXB3-201ENST00000502717 KRT25Q7Z3Z0 450 aa19.02■□□□□ 0.64
HMGXB3-201ENST00000502717 LPIN2Q92539 896 aa19.02■□□□□ 0.64
HMGXB3-201ENST00000502717 FUCA2Q9BTY2 467 aa19.02■□□□□ 0.64
HMGXB3-201ENST00000502717 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.02■□□□□ 0.64
HMGXB3-201ENST00000502717 RWDD2AQ9UIY3 292 aa19.02■□□□□ 0.64
HMGXB3-201ENST00000502717 CCNL1Q9UK58 526 aaPredicted RBP19.02■□□□□ 0.64
HMGXB3-201ENST00000502717 HIP1RO75146 1068 aa19.02■□□□□ 0.64
HMGXB3-201ENST00000502717 EPB41P11171 864 aaKnown RBP19.02■□□□□ 0.64
HMGXB3-201ENST00000502717 TNFAIP3P21580 790 aa19.02■□□□□ 0.64
HMGXB3-201ENST00000502717 CCDC63Q8NA47 563 aa19.02■□□□□ 0.64
HMGXB3-201ENST00000502717 PPP1R14CQ8TAE6 165 aa19.02■□□□□ 0.64
HMGXB3-201ENST00000502717 NAP1L4Q99733 375 aaKnown RBP19.02■□□□□ 0.64
HMGXB3-201ENST00000502717 ADGRG1Q9Y653 693 aa19.02■□□□□ 0.64
HMGXB3-201ENST00000502717 ALKQ9UM73 1620 aa19.02■□□□□ 0.64
HMGXB3-201ENST00000502717 LUC7L3O95232 432 aaKnown RBP19.02■□□□□ 0.63
HMGXB3-201ENST00000502717 CLTAP09496 248 aa19.02■□□□□ 0.63
HMGXB3-201ENST00000502717 C2orf54Q08AI8 447 aa19.02■□□□□ 0.63
HMGXB3-201ENST00000502717 CCDC174Q6PII3 467 aa19.02■□□□□ 0.63
HMGXB3-201ENST00000502717 RNF10Q8N5U6 811 aaKnown RBP19.02■□□□□ 0.63
HMGXB3-201ENST00000502717 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.02■□□□□ 0.632e-6■□□□□ 10.2
HMGXB3-201ENST00000502717 SRPRBQ9Y5M8 271 aaKnown RBP19.02■□□□□ 0.63
HMGXB3-201ENST00000502717 ERVV-2B6SEH9 535 aa19.01■□□□□ 0.63
HMGXB3-201ENST00000502717 BUB1O43683 1085 aa19.01■□□□□ 0.63
HMGXB3-201ENST00000502717 CCNT1O60563 726 aaKnown RBP19.01■□□□□ 0.63
HMGXB3-201ENST00000502717 USP37Q86T82 979 aa19.01■□□□□ 0.63
HMGXB3-201ENST00000502717 IFNL3Q8IZI9 196 aa19.01■□□□□ 0.63
HMGXB3-201ENST00000502717 FBXO3Q9UK99 471 aa19.01■□□□□ 0.63
HMGXB3-201ENST00000502717 NPHP4O75161 1426 aaPredicted RBP19.01■□□□□ 0.63
HMGXB3-201ENST00000502717 KRIT1O00522 736 aa19.01■□□□□ 0.63
HMGXB3-201ENST00000502717 HEXIM1O94992 359 aaKnown RBP19.01■□□□□ 0.63
HMGXB3-201ENST00000502717 LONP1P36776 959 aaKnown RBP19.01■□□□□ 0.63
HMGXB3-201ENST00000502717 NONOQ15233 471 aaKnown RBP eCLIP19.01■□□□□ 0.63
HMGXB3-201ENST00000502717 AP1ARQ63HQ0 302 aa19.01■□□□□ 0.63
HMGXB3-201ENST00000502717 GRAMD1CQ8IYS0 662 aa19.01■□□□□ 0.63
HMGXB3-201ENST00000502717 CCDC197Q8NCU1 140 aa19.01■□□□□ 0.63
HMGXB3-201ENST00000502717 CEP63Q96MT8 703 aa19.01■□□□□ 0.63
HMGXB3-201ENST00000502717 WDR24Q96S15 920 aa19.01■□□□□ 0.63
HMGXB3-201ENST00000502717 LRWD1Q9UFC0 647 aa19.01■□□□□ 0.63
HMGXB3-201ENST00000502717 PTGDRQ13258 359 aa19.01■□□□□ 0.63
HMGXB3-201ENST00000502717 DNAJC5Q9H3Z4 198 aa19.01■□□□□ 0.63
HMGXB3-201ENST00000502717 A1BGP04217 495 aa19.01■□□□□ 0.63
HMGXB3-201ENST00000502717 DDX17Q92841 729 aaKnown RBP19.01■□□□□ 0.63
HMGXB3-201ENST00000502717 TBC1D31Q96DN5 1066 aa19.01■□□□□ 0.63
HMGXB3-201ENST00000502717 EPB41L5Q9HCM4 733 aa19.01■□□□□ 0.63
HMGXB3-201ENST00000502717 hCG_1642624A0A1W2PR95 340 aa19■□□□□ 0.63
HMGXB3-201ENST00000502717 GNA14O95837 355 aa19■□□□□ 0.63
HMGXB3-201ENST00000502717 RAB3IPQ96QF0 476 aaPredicted RBP19■□□□□ 0.63
HMGXB3-201ENST00000502717 PPP1R12CQ9BZL4 782 aa19■□□□□ 0.63
HMGXB3-201ENST00000502717 TRIM66O15016 1216 aa19■□□□□ 0.63
HMGXB3-201ENST00000502717 APBA3O96018 575 aa19■□□□□ 0.63
HMGXB3-201ENST00000502717 H2AFXP16104 143 aaPredicted RBP19■□□□□ 0.63
HMGXB3-201ENST00000502717 NR1D1P20393 614 aa19■□□□□ 0.63
HMGXB3-201ENST00000502717 RASSF2P50749 326 aa19■□□□□ 0.63
HMGXB3-201ENST00000502717 FYB2Q5VWT5 728 aa19■□□□□ 0.63
HMGXB3-201ENST00000502717 SPATA5Q8NB90 893 aa19■□□□□ 0.63
HMGXB3-201ENST00000502717 SPATS2LQ9NUQ6 558 aaKnown RBP19■□□□□ 0.63
HMGXB3-201ENST00000502717 MMP1P03956 469 aa19■□□□□ 0.63
HMGXB3-201ENST00000502717 TXKP42681 527 aa19■□□□□ 0.63
HMGXB3-201ENST00000502717 ZNF658Q5TYW1 1059 aaPredicted RBP19■□□□□ 0.63
HMGXB3-201ENST00000502717 GPIHBP1Q8IV16 184 aa19■□□□□ 0.63
HMGXB3-201ENST00000502717 ATP10DQ9P241 1426 aa19■□□□□ 0.63
HMGXB3-201ENST00000502717 INO80Q9ULG1 1556 aaPredicted RBP19■□□□□ 0.63
HMGXB3-201ENST00000502717 CCDC169A6NNP5 214 aa18.99■□□□□ 0.63
HMGXB3-201ENST00000502717 ZBED6P86452 979 aa18.99■□□□□ 0.63
HMGXB3-201ENST00000502717 SMYD4Q8IYR2 804 aaPredicted RBP18.99■□□□□ 0.63
HMGXB3-201ENST00000502717 TACO1Q9BSH4 297 aaKnown RBP18.99■□□□□ 0.63
HMGXB3-201ENST00000502717 GNPATO15228 680 aa18.99■□□□□ 0.63
HMGXB3-201ENST00000502717 PRDM1O75626 825 aa18.99■□□□□ 0.63
HMGXB3-201ENST00000502717 UBE3CQ15386 1083 aa18.99■□□□□ 0.63
HMGXB3-201ENST00000502717 GPR162Q16538 588 aa18.99■□□□□ 0.63
HMGXB3-201ENST00000502717 PROSER3Q2NL68 480 aa18.99■□□□□ 0.63
HMGXB3-201ENST00000502717 CMTR1Q8N1G2 835 aaKnown RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms