RNA–Protein interactions for RNA: ENST00000493627.1

NFIA-213, Transcript of nuclear factor I A, humanhuman

TSL 1 (best)

Gene NFIA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-213ENST00000493627 TTLL1O95922 423 aa10.86□□□□□ -0.67
NFIA-213ENST00000493627 RARBP10826 455 aa10.86□□□□□ -0.67
NFIA-213ENST00000493627 MX1P20591 662 aa10.86□□□□□ -0.67
NFIA-213ENST00000493627 ADCYAP1R1P41586 468 aa10.86□□□□□ -0.67
NFIA-213ENST00000493627 RRP1P56182 461 aaKnown RBP10.86□□□□□ -0.67
NFIA-213ENST00000493627 SNX17Q15036 470 aa10.86□□□□□ -0.67
NFIA-213ENST00000493627 TRIM60Q495X7 471 aa10.86□□□□□ -0.67
NFIA-213ENST00000493627 ZMYM1Q5SVZ6 1142 aa10.86□□□□□ -0.67
NFIA-213ENST00000493627 DEFB123Q8N688 67 aa10.86□□□□□ -0.67
NFIA-213ENST00000493627 PRPF38AQ8NAV1 312 aaKnown RBP10.86□□□□□ -0.67
NFIA-213ENST00000493627 NAPBQ9H115 298 aa10.86□□□□□ -0.67
NFIA-213ENST00000493627 XPNPEP3Q9NQH7 507 aa10.86□□□□□ -0.67
NFIA-213ENST00000493627 MTMR4Q9NYA4 1195 aa10.86□□□□□ -0.67
NFIA-213ENST00000493627 CLIP2Q9UDT6 1046 aa10.86□□□□□ -0.67
NFIA-213ENST00000493627 SYNPO2Q9UMS6 1093 aa10.86□□□□□ -0.67
NFIA-213ENST00000493627 RIPK3Q9Y572 518 aa10.86□□□□□ -0.67
NFIA-213ENST00000493627 LTBP2Q14767 1821 aa10.86□□□□□ -0.67
NFIA-213ENST00000493627 COL6A3P12111 3177 aa10.85□□□□□ -0.67
NFIA-213ENST00000493627 ATP2A1O14983 1001 aa10.85□□□□□ -0.67
NFIA-213ENST00000493627 ZBED4O75132 1171 aa10.85□□□□□ -0.67
NFIA-213ENST00000493627 SLC3A2P08195 630 aaKnown RBP10.85□□□□□ -0.67
NFIA-213ENST00000493627 ZNF865P0CJ78 1059 aaPredicted RBP10.85□□□□□ -0.67
NFIA-213ENST00000493627 TSPY3P0CV98 308 aa10.85□□□□□ -0.67
NFIA-213ENST00000493627 TSPY8P0CW00 308 aa10.85□□□□□ -0.67
NFIA-213ENST00000493627 AKR1A1P14550 325 aa10.85□□□□□ -0.67
NFIA-213ENST00000493627 TAL1P17542 331 aaPredicted RBP10.85□□□□□ -0.67
NFIA-213ENST00000493627 PDE4BQ07343 736 aa10.85□□□□□ -0.67
NFIA-213ENST00000493627 PPARAQ07869 468 aa10.85□□□□□ -0.67
NFIA-213ENST00000493627 SLC39A5Q6ZMH5 540 aa10.85□□□□□ -0.67
NFIA-213ENST00000493627 Q7L0L9 218 aa10.85□□□□□ -0.67
NFIA-213ENST00000493627 CPXCR1Q8N123 301 aa10.85□□□□□ -0.67
NFIA-213ENST00000493627 GMCL1P1Q8NEA9 526 aa10.85□□□□□ -0.67
NFIA-213ENST00000493627 MKL1Q969V6 931 aa10.85□□□□□ -0.67
NFIA-213ENST00000493627 FERMT2Q96AC1 680 aa10.85□□□□□ -0.67
NFIA-213ENST00000493627 KIFC2Q96AC6 838 aa10.85□□□□□ -0.67
NFIA-213ENST00000493627 LENG1Q96BZ8 264 aaPredicted RBP10.85□□□□□ -0.67
NFIA-213ENST00000493627 SLC38A10Q9HBR0 1119 aa10.85□□□□□ -0.67
NFIA-213ENST00000493627 PRDM5Q9NQX1 630 aaPredicted RBP10.85□□□□□ -0.67
NFIA-213ENST00000493627 PHF24Q9UPV7 400 aa10.85□□□□□ -0.67
NFIA-213ENST00000493627 CNPY2Q9Y2B0 182 aa10.85□□□□□ -0.67
NFIA-213ENST00000493627 CTDP1Q9Y5B0 961 aaPredicted RBP10.85□□□□□ -0.67
NFIA-213ENST00000493627 SALL3Q9BXA9 1300 aa10.84□□□□□ -0.67
NFIA-213ENST00000493627 DNAJC25-GNG10A0A024R161 153 aa10.84□□□□□ -0.67
NFIA-213ENST00000493627 PGK1P00558 417 aa10.84□□□□□ -0.67
NFIA-213ENST00000493627 SLC4A3P48751 1232 aa10.84□□□□□ -0.67
NFIA-213ENST00000493627 SLFN13Q68D06 897 aa10.84□□□□□ -0.67
NFIA-213ENST00000493627 RNF180Q86T96 592 aa10.84□□□□□ -0.67
NFIA-213ENST00000493627 MSL3Q8N5Y2 521 aaKnown RBP10.84□□□□□ -0.67
NFIA-213ENST00000493627 NEDD1Q8NHV4 660 aa10.84□□□□□ -0.67
NFIA-213ENST00000493627 DDX11Q96FC9 970 aa10.84□□□□□ -0.67
NFIA-213ENST00000493627 RAVER2Q9HCJ3 691 aaKnown RBP10.84□□□□□ -0.67
NFIA-213ENST00000493627 PDLIM7Q9NR12 457 aa10.84□□□□□ -0.67
NFIA-213ENST00000493627 FEM1BQ9UK73 627 aa10.84□□□□□ -0.67
NFIA-213ENST00000493627 ZHX1Q9UKY1 873 aaPredicted RBP10.84□□□□□ -0.67
NFIA-213ENST00000493627 ISY1Q9ULR0 285 aaKnown RBP10.84□□□□□ -0.67
NFIA-213ENST00000493627 SYNGAP1Q96PV0 1343 aa10.84□□□□□ -0.67
NFIA-213ENST00000493627 PLXNA1Q9UIW2 1896 aa10.83□□□□□ -0.68
NFIA-213ENST00000493627 FOXP2O15409 715 aa10.83□□□□□ -0.68
NFIA-213ENST00000493627 ADAMTS4O75173 837 aa10.83□□□□□ -0.68
NFIA-213ENST00000493627 BMP3P12645 472 aa10.83□□□□□ -0.68
NFIA-213ENST00000493627 OAZ1P54368 228 aa10.83□□□□□ -0.68
NFIA-213ENST00000493627 TFAP4Q01664 338 aa10.83□□□□□ -0.68
NFIA-213ENST00000493627 C1orf53Q5VUE5 145 aa10.83□□□□□ -0.68
NFIA-213ENST00000493627 MAMDC4Q6UXC1 1216 aa10.83□□□□□ -0.68
NFIA-213ENST00000493627 CCDC129Q6ZRS4 1044 aa10.83□□□□□ -0.68
NFIA-213ENST00000493627 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.83□□□□□ -0.68
NFIA-213ENST00000493627 ZNF467Q7Z7K2 595 aaPredicted RBP10.83□□□□□ -0.68
NFIA-213ENST00000493627 CRBNQ96SW2 442 aa10.83□□□□□ -0.68
NFIA-213ENST00000493627 ZBTB47Q9UFB7 747 aaPredicted RBP10.83□□□□□ -0.68
NFIA-213ENST00000493627 FBXO40Q9UH90 709 aa10.83□□□□□ -0.68
NFIA-213ENST00000493627 MYH4Q9Y623 1939 aa10.83□□□□□ -0.68
NFIA-213ENST00000493627 SYNRGQ9UMZ2 1314 aa10.83□□□□□ -0.68
NFIA-213ENST00000493627 LAMA2P24043 3122 aaKnown RBP10.82□□□□□ -0.68
NFIA-213ENST00000493627 A0A1W2PQ45 241 aaPredicted RBP10.82□□□□□ -0.68
NFIA-213ENST00000493627 A0A1W2PQY0 241 aa10.82□□□□□ -0.68
NFIA-213ENST00000493627 SNAI1O95863 264 aaPredicted RBP10.82□□□□□ -0.68
NFIA-213ENST00000493627 STAT2P52630 851 aa10.82□□□□□ -0.68
NFIA-213ENST00000493627 TLE2Q04725 743 aa10.82□□□□□ -0.68
NFIA-213ENST00000493627 ANKRD35Q8N283 1001 aa10.82□□□□□ -0.68
NFIA-213ENST00000493627 CHST13Q8NET6 341 aa10.82□□□□□ -0.68
NFIA-213ENST00000493627 BADQ92934 168 aa10.82□□□□□ -0.68
NFIA-213ENST00000493627 FGD4Q96M96 766 aa10.82□□□□□ -0.68
NFIA-213ENST00000493627 HOMER2Q9NSB8 354 aa10.82□□□□□ -0.68
NFIA-213ENST00000493627 MTMR10Q9NXD2 777 aa10.82□□□□□ -0.68
NFIA-213ENST00000493627 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.82□□□□□ -0.68
NFIA-213ENST00000493627 STX8Q9UNK0 236 aa10.82□□□□□ -0.68
NFIA-213ENST00000493627 STXBP5LQ9Y2K9 1186 aa10.82□□□□□ -0.68
NFIA-213ENST00000493627 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.82□□□□□ -0.68
NFIA-213ENST00000493627 TRIM43BA6NCK2 446 aa10.81□□□□□ -0.68
NFIA-213ENST00000493627 TSPY2A6NKD2 308 aa10.81□□□□□ -0.68
NFIA-213ENST00000493627 TMEM232C9JQI7 657 aa10.81□□□□□ -0.68
NFIA-213ENST00000493627 PQBP1O60828 265 aaKnown RBP10.81□□□□□ -0.68
NFIA-213ENST00000493627 CLTBP09497 229 aa10.81□□□□□ -0.68
NFIA-213ENST00000493627 FDX1P10109 184 aa10.81□□□□□ -0.68
NFIA-213ENST00000493627 SLC1A4P43007 532 aa10.81□□□□□ -0.68
NFIA-213ENST00000493627 IKQ13123 557 aaPredicted RBP10.81□□□□□ -0.68
NFIA-213ENST00000493627 PPP4R3BQ5MIZ7 849 aa10.81□□□□□ -0.68
NFIA-213ENST00000493627 ANKRD45Q5TZF3 282 aa10.81□□□□□ -0.68
NFIA-213ENST00000493627 VPS53Q5VIR6 699 aa10.81□□□□□ -0.68
NFIA-213ENST00000493627 SH3RF1Q7Z6J0 888 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 144.9 ms