RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 ATP13A2Q9NQ11 1180 aa8.85□□□□□ -0.99
PRPF4B-208ENST00000490653 MCM9Q9NXL9 1143 aa8.85□□□□□ -0.99
PRPF4B-208ENST00000490653 RBPJLQ9UBG7 517 aa8.85□□□□□ -0.99
PRPF4B-208ENST00000490653 SLC45A1Q9Y2W3 748 aa8.85□□□□□ -0.99
PRPF4B-208ENST00000490653 UNC80Q8N2C7 3258 aa8.84□□□□□ -0.99
PRPF4B-208ENST00000490653 A0A1W2PRG0 241 aa8.84□□□□□ -0.99
PRPF4B-208ENST00000490653 USP17L10C9JJH3 530 aa8.84□□□□□ -0.99
PRPF4B-208ENST00000490653 DXOO77932 396 aaKnown RBP8.84□□□□□ -0.99
PRPF4B-208ENST00000490653 ASNSP08243 561 aa8.84□□□□□ -0.99
PRPF4B-208ENST00000490653 VCANP13611 3396 aa8.84□□□□□ -0.99
PRPF4B-208ENST00000490653 HOXD10P28358 340 aa8.84□□□□□ -0.99
PRPF4B-208ENST00000490653 GRK4P32298 578 aa8.84□□□□□ -0.99
PRPF4B-208ENST00000490653 FCGRTP55899 365 aa8.84□□□□□ -0.99
PRPF4B-208ENST00000490653 RRP1P56182 461 aaKnown RBP8.84□□□□□ -0.99
PRPF4B-208ENST00000490653 SEPT2Q15019 361 aa8.84□□□□□ -0.99
PRPF4B-208ENST00000490653 RAB3GAP1Q15042 981 aa8.84□□□□□ -0.99
PRPF4B-208ENST00000490653 CERKLQ49MI3 558 aaPredicted RBP8.84□□□□□ -0.99
PRPF4B-208ENST00000490653 KIAA1755Q5JYT7 1200 aa8.84□□□□□ -0.99
PRPF4B-208ENST00000490653 TTC6Q86TZ1 520 aa8.84□□□□□ -0.99
PRPF4B-208ENST00000490653 CLEC10AQ8IUN9 316 aa8.84□□□□□ -0.99
PRPF4B-208ENST00000490653 SIAH1Q8IUQ4 282 aa8.84□□□□□ -0.99
PRPF4B-208ENST00000490653 STK11IPQ8N1F8 1099 aa8.84□□□□□ -0.99
PRPF4B-208ENST00000490653 SMCR8Q8TEV9 937 aaPredicted RBP8.84□□□□□ -0.99
PRPF4B-208ENST00000490653 DIS3LQ8TF46 1054 aaKnown RBP8.84□□□□□ -0.99
PRPF4B-208ENST00000490653 MRGPRX2Q96LB1 330 aa8.84□□□□□ -0.99
PRPF4B-208ENST00000490653 CHMP4BQ9H444 224 aaKnown RBP8.84□□□□□ -0.99
PRPF4B-208ENST00000490653 SERPINB13Q9UIV8 391 aa8.84□□□□□ -0.99
PRPF4B-208ENST00000490653 GJD2Q9UKL4 321 aa8.84□□□□□ -0.99
PRPF4B-208ENST00000490653 C19orf81C9J6K1 198 aa8.83□□□□□ -1
PRPF4B-208ENST00000490653 DLL1O00548 723 aa8.83□□□□□ -1
PRPF4B-208ENST00000490653 TNPO2O14787 897 aaKnown RBP8.83□□□□□ -1
PRPF4B-208ENST00000490653 ADCY3O60266 1144 aa8.83□□□□□ -1
PRPF4B-208ENST00000490653 IGSF3O75054 1194 aa8.83□□□□□ -1
PRPF4B-208ENST00000490653 CNMDO75829 334 aa8.83□□□□□ -1
PRPF4B-208ENST00000490653 GNRH1P01148 92 aa8.83□□□□□ -1
PRPF4B-208ENST00000490653 AKR1B1P15121 316 aa8.83□□□□□ -1
PRPF4B-208ENST00000490653 HOXA7P31268 230 aaPredicted RBP8.83□□□□□ -1
PRPF4B-208ENST00000490653 PRMT2P55345 433 aa8.83□□□□□ -1
PRPF4B-208ENST00000490653 ABCB5Q2M3G0 1257 aa8.83□□□□□ -1
PRPF4B-208ENST00000490653 GPIHBP1Q8IV16 184 aa8.83□□□□□ -1
PRPF4B-208ENST00000490653 U2AF1L4Q8WU68 220 aaKnown RBP8.83□□□□□ -1
PRPF4B-208ENST00000490653 DPF3Q92784 378 aa8.83□□□□□ -1
PRPF4B-208ENST00000490653 OSBP2Q969R2 916 aa8.83□□□□□ -1
PRPF4B-208ENST00000490653 USB1Q9BQ65 265 aaKnown RBP8.83□□□□□ -1
PRPF4B-208ENST00000490653 CRNKL1Q9BZJ0 848 aaKnown RBP8.83□□□□□ -1
PRPF4B-208ENST00000490653 EHD4Q9H223 541 aa8.83□□□□□ -1
PRPF4B-208ENST00000490653 TMOD4Q9NZQ9 345 aa8.83□□□□□ -1
PRPF4B-208ENST00000490653 BIN2Q9UBW5 565 aaPredicted RBP8.83□□□□□ -1
PRPF4B-208ENST00000490653 STAP2Q9UGK3 403 aa8.83□□□□□ -1
PRPF4B-208ENST00000490653 BAZ2AQ9UIF9 1905 aaKnown RBP8.83□□□□□ -1
PRPF4B-208ENST00000490653 CUL9Q8IWT3 2517 aa8.82□□□□□ -1
PRPF4B-208ENST00000490653 USP17L12C9JPN9 530 aa8.82□□□□□ -1
PRPF4B-208ENST00000490653 USP17L21D6R901 530 aa8.82□□□□□ -1
PRPF4B-208ENST00000490653 J3QL48 77 aa8.82□□□□□ -1
PRPF4B-208ENST00000490653 MPHOSPH10O00566 681 aaKnown RBP8.82□□□□□ -1
PRPF4B-208ENST00000490653 HERVK_113P62684 666 aa8.82□□□□□ -1
PRPF4B-208ENST00000490653 UBE3CQ15386 1083 aa8.82□□□□□ -1
PRPF4B-208ENST00000490653 CTR9Q6PD62 1173 aa8.82□□□□□ -1
PRPF4B-208ENST00000490653 USP17L2Q6R6M4 530 aa8.82□□□□□ -1
PRPF4B-208ENST00000490653 CATSPERGQ6ZRH7 1159 aa8.82□□□□□ -1
PRPF4B-208ENST00000490653 STRBPQ96SI9 672 aaKnown RBP8.82□□□□□ -1
PRPF4B-208ENST00000490653 SEC62Q99442 399 aaKnown RBP8.82□□□□□ -1
PRPF4B-208ENST00000490653 PAGR1Q9BTK6 254 aa8.82□□□□□ -1
PRPF4B-208ENST00000490653 REPIN1Q9BWE0 567 aaKnown RBP8.82□□□□□ -1
PRPF4B-208ENST00000490653 TBC1D2Q9BYX2 928 aa8.82□□□□□ -1
PRPF4B-208ENST00000490653 RNF208Q9H0X6 261 aa8.82□□□□□ -1
PRPF4B-208ENST00000490653 PORCNQ9H237 461 aa8.82□□□□□ -1
PRPF4B-208ENST00000490653 ECHDC1Q9NTX5 307 aa8.82□□□□□ -1
PRPF4B-208ENST00000490653 MORF4L1Q9UBU8 362 aa8.82□□□□□ -1
PRPF4B-208ENST00000490653 SLC4A4Q9Y6R1 1079 aa8.82□□□□□ -1
PRPF4B-208ENST00000490653 SPTBN5Q9NRC6 3674 aaKnown RBP8.82□□□□□ -1
PRPF4B-208ENST00000490653 LOC285556D6RIA3 1793 aa8.81□□□□□ -1
PRPF4B-208ENST00000490653 EYSQ5T1H1 3165 aa8.81□□□□□ -1
PRPF4B-208ENST00000490653 M0R2C6 588 aa8.81□□□□□ -1
PRPF4B-208ENST00000490653 FARP2O94887 1054 aaPredicted RBP8.81□□□□□ -1
PRPF4B-208ENST00000490653 SGPL1O95470 568 aa8.81□□□□□ -1
PRPF4B-208ENST00000490653 INHAP05111 366 aa8.81□□□□□ -1
PRPF4B-208ENST00000490653 SNRPBP14678 240 aaKnown RBP8.81□□□□□ -1
PRPF4B-208ENST00000490653 CYP2B6P20813 491 aa8.81□□□□□ -1
PRPF4B-208ENST00000490653 GCLCP48506 637 aaPredicted RBP8.81□□□□□ -1
PRPF4B-208ENST00000490653 CDK8P49336 464 aa8.81□□□□□ -1
PRPF4B-208ENST00000490653 IRX3P78415 501 aaPredicted RBP8.81□□□□□ -1
PRPF4B-208ENST00000490653 FAM110CQ1W6H9 321 aa8.81□□□□□ -1
PRPF4B-208ENST00000490653 C12orf60Q5U649 245 aa8.81□□□□□ -1
PRPF4B-208ENST00000490653 Q7L0L9 218 aa8.81□□□□□ -1
PRPF4B-208ENST00000490653 PI4K2BQ8TCG2 481 aa8.81□□□□□ -1
PRPF4B-208ENST00000490653 GDF15Q99988 308 aa8.81□□□□□ -1
PRPF4B-208ENST00000490653 CABP5Q9NP86 173 aa8.81□□□□□ -1
PRPF4B-208ENST00000490653 PAK6Q9NQU5 681 aaPredicted RBP8.81□□□□□ -1
PRPF4B-208ENST00000490653 GINM1Q9NU53 330 aa8.81□□□□□ -1
PRPF4B-208ENST00000490653 BTBD7Q9P203 1132 aa8.81□□□□□ -1
PRPF4B-208ENST00000490653 STK17AQ9UEE5 414 aa8.81□□□□□ -1
PRPF4B-208ENST00000490653 PLXNB2O15031 1838 aa8.81□□□□□ -1
PRPF4B-208ENST00000490653 GSG1L2A8MUP6 293 aa8.8□□□□□ -1
PRPF4B-208ENST00000490653 USP17L15C9J2P7 530 aa8.8□□□□□ -1
PRPF4B-208ENST00000490653 USP17L13C9JLJ4 530 aa8.8□□□□□ -1
PRPF4B-208ENST00000490653 USP17L11C9JVI0 530 aa8.8□□□□□ -1
PRPF4B-208ENST00000490653 USP17L18D6R9N7 530 aa8.8□□□□□ -1
PRPF4B-208ENST00000490653 USP17L22D6RA61 530 aa8.8□□□□□ -1
PRPF4B-208ENST00000490653 USP17L17D6RBQ6 530 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms