RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 ERVV-1B6SEH8 477 aa21.93■■□□□ 1.1
HMG20B-213ENST00000488973 COBLO75128 1261 aa21.93■■□□□ 1.1
HMG20B-213ENST00000488973 TRAPPC10P48553 1259 aa21.93■■□□□ 1.1
HMG20B-213ENST00000488973 USP14P54578 494 aa21.93■■□□□ 1.1
HMG20B-213ENST00000488973 UBXN1Q04323 297 aa21.93■■□□□ 1.1
HMG20B-213ENST00000488973 CHP1Q99653 195 aa21.93■■□□□ 1.1
HMG20B-213ENST00000488973 LRP2BPQ9P2M1 347 aa21.93■■□□□ 1.1
HMG20B-213ENST00000488973 BAZ2AQ9UIF9 1905 aaKnown RBP21.93■■□□□ 1.1
HMG20B-213ENST00000488973 H7C1D1 291 aa21.92■■□□□ 1.1
HMG20B-213ENST00000488973 TRIM66O15016 1216 aa21.92■■□□□ 1.1
HMG20B-213ENST00000488973 PLEKHA8P1O95397 391 aa21.92■■□□□ 1.1
HMG20B-213ENST00000488973 IFIT1BQ5T764 474 aaKnown RBP21.92■■□□□ 1.1
HMG20B-213ENST00000488973 GOLGA6L1Q8N7Z2 621 aa21.92■■□□□ 1.1
HMG20B-213ENST00000488973 OR8K1Q8NGG5 319 aa21.92■■□□□ 1.1
HMG20B-213ENST00000488973 MTRQ99707 1265 aa21.92■■□□□ 1.1
HMG20B-213ENST00000488973 MAP9Q49MG5 647 aa21.92■■□□□ 1.1
HMG20B-213ENST00000488973 ZNF662Q6ZS27 426 aa21.92■■□□□ 1.1
HMG20B-213ENST00000488973 RPGRIP1Q96KN7 1286 aa21.92■■□□□ 1.1
HMG20B-213ENST00000488973 GUCA1BQ9UMX6 200 aa21.92■■□□□ 1.1
HMG20B-213ENST00000488973 hCG_1642624A0A1W2PR95 340 aa21.91■■□□□ 1.1
HMG20B-213ENST00000488973 SNAP23O00161 211 aa21.91■■□□□ 1.1
HMG20B-213ENST00000488973 CYP19A1P11511 503 aaPredicted RBP21.91■■□□□ 1.1
HMG20B-213ENST00000488973 NOM1Q5C9Z4 860 aaKnown RBP21.91■■□□□ 1.1
HMG20B-213ENST00000488973 DNAJC7Q99615 494 aa21.91■■□□□ 1.1
HMG20B-213ENST00000488973 A0A1W2PQC6 194 aa21.91■■□□□ 1.1
HMG20B-213ENST00000488973 RPN1P04843 607 aaKnown RBP21.91■■□□□ 1.1
HMG20B-213ENST00000488973 BCAMP50895 628 aa21.91■■□□□ 1.1
HMG20B-213ENST00000488973 TROAPQ12815 778 aa21.91■■□□□ 1.1
HMG20B-213ENST00000488973 EGFL6Q8IUX8 553 aa21.91■■□□□ 1.1
HMG20B-213ENST00000488973 ZNF34Q8IZ26 560 aa21.91■■□□□ 1.1
HMG20B-213ENST00000488973 TARSL2A2RTX5 802 aaKnown RBP21.9■■□□□ 1.1
HMG20B-213ENST00000488973 CYP7A1P22680 504 aa21.9■■□□□ 1.1
HMG20B-213ENST00000488973 SATB1Q01826 763 aa21.9■■□□□ 1.1
HMG20B-213ENST00000488973 PAPD7Q5XG87 772 aaKnown RBP21.9■■□□□ 1.1
HMG20B-213ENST00000488973 TMTC3Q6ZXV5 915 aa21.9■■□□□ 1.1
HMG20B-213ENST00000488973 SDR42E1Q8WUS8 393 aa21.9■■□□□ 1.1
HMG20B-213ENST00000488973 SAR1BQ9Y6B6 198 aa21.9■■□□□ 1.1
HMG20B-213ENST00000488973 TTC26A0AVF1 554 aa21.9■■□□□ 1.1
HMG20B-213ENST00000488973 DDAH1O94760 285 aa21.9■■□□□ 1.1
HMG20B-213ENST00000488973 FAM204AQ9H8W3 233 aa21.9■■□□□ 1.1
HMG20B-213ENST00000488973 LUC7L2Q9Y383 392 aaKnown RBP21.9■■□□□ 1.1
HMG20B-213ENST00000488973 PARP1P09874 1014 aaKnown RBP21.89■■□□□ 1.1
HMG20B-213ENST00000488973 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.89■■□□□ 1.1
HMG20B-213ENST00000488973 IQCA1Q86XH1 822 aa21.89■■□□□ 1.1
HMG20B-213ENST00000488973 MB21D1Q8N884 522 aa21.89■■□□□ 1.1
HMG20B-213ENST00000488973 CDCA7Q9BWT1 371 aaPredicted RBP21.89■■□□□ 1.1
HMG20B-213ENST00000488973 MAGEB6P1A0A0J9YX57 407 aa21.89■■□□□ 1.09
HMG20B-213ENST00000488973 PCP11498 1178 aaKnown RBP21.89■■□□□ 1.09
HMG20B-213ENST00000488973 PRCPP42785 496 aa21.89■■□□□ 1.09
HMG20B-213ENST00000488973 IL17AQ16552 155 aa21.89■■□□□ 1.09
HMG20B-213ENST00000488973 ARL6IP4Q66PJ3 421 aaKnown RBP21.89■■□□□ 1.09
HMG20B-213ENST00000488973 IRF2BP1Q8IU81 584 aa21.89■■□□□ 1.09
HMG20B-213ENST00000488973 EHBP1Q8NDI1 1231 aa21.89■■□□□ 1.09
HMG20B-213ENST00000488973 DONSONQ9NYP3 566 aa21.89■■□□□ 1.09
HMG20B-213ENST00000488973 TRIM10Q9UDY6 481 aa21.89■■□□□ 1.09
HMG20B-213ENST00000488973 CAPN11Q9UMQ6 739 aa21.89■■□□□ 1.09
HMG20B-213ENST00000488973 CNTNAP5Q8WYK1 1306 aa21.89■■□□□ 1.09
HMG20B-213ENST00000488973 PHLPP1O60346 1717 aa21.88■■□□□ 1.09
HMG20B-213ENST00000488973 LGALS16A8MUM7 142 aa21.88■■□□□ 1.09
HMG20B-213ENST00000488973 TOM1O60784 492 aa21.88■■□□□ 1.09
HMG20B-213ENST00000488973 PHACTR2O75167 634 aa21.88■■□□□ 1.09
HMG20B-213ENST00000488973 EEF1GP26641 437 aaKnown RBP21.88■■□□□ 1.09
HMG20B-213ENST00000488973 CKAP4Q07065 602 aaKnown RBP21.88■■□□□ 1.09
HMG20B-213ENST00000488973 TSR1Q2NL82 804 aaKnown RBP21.88■■□□□ 1.09
HMG20B-213ENST00000488973 ADGRA1Q86SQ6 560 aa21.88■■□□□ 1.09
HMG20B-213ENST00000488973 ZBTB1Q9Y2K1 713 aa21.88■■□□□ 1.09
HMG20B-213ENST00000488973 JRKLQ9Y4A0 524 aa21.88■■□□□ 1.09
HMG20B-213ENST00000488973 SLIT2O94813 1529 aa21.88■■□□□ 1.09
HMG20B-213ENST00000488973 EXOC5O00471 708 aa21.88■■□□□ 1.09
HMG20B-213ENST00000488973 KIF1CO43896 1103 aaKnown RBP21.88■■□□□ 1.09
HMG20B-213ENST00000488973 SYF2O95926 243 aaKnown RBP21.88■■□□□ 1.09
HMG20B-213ENST00000488973 FGRP09769 529 aa21.88■■□□□ 1.09
HMG20B-213ENST00000488973 LONP1P36776 959 aaKnown RBP21.88■■□□□ 1.09
HMG20B-213ENST00000488973 KRT83P78385 493 aa21.88■■□□□ 1.09
HMG20B-213ENST00000488973 LRRC31Q6UY01 552 aa21.88■■□□□ 1.09
HMG20B-213ENST00000488973 GDAQ9Y2T3 454 aa21.88■■□□□ 1.09
HMG20B-213ENST00000488973 THRAP3Q9Y2W1 955 aaKnown RBP21.88■■□□□ 1.09
HMG20B-213ENST00000488973 RNF40O75150 1001 aa21.87■■□□□ 1.09
HMG20B-213ENST00000488973 HERVK_113P62684 666 aa21.87■■□□□ 1.09
HMG20B-213ENST00000488973 CCDC122Q5T0U0 273 aa21.87■■□□□ 1.09
HMG20B-213ENST00000488973 DZIP3Q86Y13 1208 aaKnown RBP21.87■■□□□ 1.09
HMG20B-213ENST00000488973 ADSSL1Q8N142 457 aa21.87■■□□□ 1.09
HMG20B-213ENST00000488973 ZNF507Q8TCN5 953 aa21.87■■□□□ 1.09
HMG20B-213ENST00000488973 MMS19Q96T76 1030 aa21.87■■□□□ 1.09
HMG20B-213ENST00000488973 RREB1Q92766 1687 aa21.87■■□□□ 1.09
HMG20B-213ENST00000488973 PRPF6O94906 941 aaKnown RBP21.87■■□□□ 1.09
HMG20B-213ENST00000488973 ATP1A1P05023 1023 aaKnown RBP21.87■■□□□ 1.09
HMG20B-213ENST00000488973 EP400NLQ6ZTU2 488 aa21.87■■□□□ 1.09
HMG20B-213ENST00000488973 PIK3AP1Q6ZUJ8 805 aa21.87■■□□□ 1.09
HMG20B-213ENST00000488973 AFAP1L1Q8TED9 768 aa21.87■■□□□ 1.09
HMG20B-213ENST00000488973 HDAC6Q9UBN7 1215 aa21.87■■□□□ 1.09
HMG20B-213ENST00000488973 HPCAL4Q9UM19 191 aa21.87■■□□□ 1.09
HMG20B-213ENST00000488973 CACNA1SQ13698 1873 aa21.87■■□□□ 1.09
HMG20B-213ENST00000488973 ENC1O14682 589 aa21.86■■□□□ 1.09
HMG20B-213ENST00000488973 FOXR1Q6PIV2 292 aa21.86■■□□□ 1.09
HMG20B-213ENST00000488973 WDR59Q6PJI9 974 aa21.86■■□□□ 1.09
HMG20B-213ENST00000488973 THAP9Q9H5L6 903 aa21.86■■□□□ 1.09
HMG20B-213ENST00000488973 BAZ2BQ9UIF8 2168 aaKnown RBP21.86■■□□□ 1.09
HMG20B-213ENST00000488973 PDS5AQ29RF7 1337 aaKnown RBP21.86■■□□□ 1.09
HMG20B-213ENST00000488973 MCM7P33993 719 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 140.2 ms