RNA–Protein interactions for RNA: ENST00000488128.6

COL16A1-214, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 2,854 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-214ENST00000488128 ZNF654Q8IZM8 581 aa15.91■□□□□ 0.14
COL16A1-214ENST00000488128 MSL3Q8N5Y2 521 aaKnown RBP15.91■□□□□ 0.14
COL16A1-214ENST00000488128 AATFQ9NY61 560 aaKnown RBP eCLIP15.91■□□□□ 0.14
COL16A1-214ENST00000488128 RIPOR2Q9Y4F9 1068 aa15.91■□□□□ 0.14
COL16A1-214ENST00000488128 PLEKHA8P1O95397 391 aa15.91■□□□□ 0.14
COL16A1-214ENST00000488128 EIF5P55010 431 aaKnown RBP15.91■□□□□ 0.14
COL16A1-214ENST00000488128 NUP188Q5SRE5 1749 aa15.91■□□□□ 0.14
COL16A1-214ENST00000488128 SH3RF1Q7Z6J0 888 aa15.91■□□□□ 0.14
COL16A1-214ENST00000488128 ANKRD18AQ8IVF6 992 aa15.91■□□□□ 0.14
COL16A1-214ENST00000488128 ANKRD20A12PQ8NF67 263 aa15.91■□□□□ 0.14
COL16A1-214ENST00000488128 FAM107BQ9H098 131 aa15.91■□□□□ 0.14
COL16A1-214ENST00000488128 VIPAS39Q9H9C1 493 aa15.91■□□□□ 0.14
COL16A1-214ENST00000488128 BRMS1Q9HCU9 246 aa15.91■□□□□ 0.14
COL16A1-214ENST00000488128 PARP4Q9UKK3 1724 aaKnown RBP15.91■□□□□ 0.14
COL16A1-214ENST00000488128 PSMD14O00487 310 aa15.9■□□□□ 0.14
COL16A1-214ENST00000488128 NKRFO15226 690 aaKnown RBP eCLIP15.9■□□□□ 0.14
COL16A1-214ENST00000488128 PLEKP08567 350 aaPredicted RBP15.9■□□□□ 0.14
COL16A1-214ENST00000488128 PARP1P09874 1014 aaKnown RBP15.9■□□□□ 0.14
COL16A1-214ENST00000488128 MCTP2Q6DN12 878 aa15.9■□□□□ 0.14
COL16A1-214ENST00000488128 KCNV1Q6PIU1 500 aa15.9■□□□□ 0.14
COL16A1-214ENST00000488128 ANKRD13CQ8N6S4 541 aa15.9■□□□□ 0.14
COL16A1-214ENST00000488128 YY1AP1Q9H869 796 aa15.9■□□□□ 0.14
COL16A1-214ENST00000488128 MYO1AQ9UBC5 1043 aa15.9■□□□□ 0.14
COL16A1-214ENST00000488128 LIMA1Q9UHB6 759 aaKnown RBP15.9■□□□□ 0.14
COL16A1-214ENST00000488128 CAPN7Q9Y6W3 813 aa15.9■□□□□ 0.14
COL16A1-214ENST00000488128 B4DLN1 442 aa15.9■□□□□ 0.14
COL16A1-214ENST00000488128 H0YHG0 523 aa15.9■□□□□ 0.14
COL16A1-214ENST00000488128 VEGFAP15692 232 aaPredicted RBP15.9■□□□□ 0.14
COL16A1-214ENST00000488128 TRIM21P19474 475 aaKnown RBP15.9■□□□□ 0.14
COL16A1-214ENST00000488128 TUBB4BP68371 445 aa15.9■□□□□ 0.14
COL16A1-214ENST00000488128 IRF2BP1Q8IU81 584 aa15.9■□□□□ 0.14
COL16A1-214ENST00000488128 LCORLQ8N3X6 602 aa15.9■□□□□ 0.14
COL16A1-214ENST00000488128 RASSF8Q8NHQ8 419 aa15.9■□□□□ 0.14
COL16A1-214ENST00000488128 SDR42E1Q8WUS8 393 aa15.9■□□□□ 0.14
COL16A1-214ENST00000488128 HAUS4Q9H6D7 363 aa15.9■□□□□ 0.14
COL16A1-214ENST00000488128 MYH10P35580 1976 aa15.9■□□□□ 0.14
COL16A1-214ENST00000488128 ANKRD18BA2A2Z9 1011 aa15.89■□□□□ 0.13
COL16A1-214ENST00000488128 KRT14P02533 472 aa15.89■□□□□ 0.13
COL16A1-214ENST00000488128 INPP5BP32019 993 aa15.89■□□□□ 0.13
COL16A1-214ENST00000488128 CTSWP56202 376 aa15.89■□□□□ 0.13
COL16A1-214ENST00000488128 TSEN2Q8NCE0 465 aaKnown RBP15.89■□□□□ 0.13
COL16A1-214ENST00000488128 UBAC1Q9BSL1 405 aa15.89■□□□□ 0.13
COL16A1-214ENST00000488128 SLC4A4Q9Y6R1 1079 aa15.89■□□□□ 0.13
COL16A1-214ENST00000488128 GSG1L2A8MUP6 293 aa15.89■□□□□ 0.13
COL16A1-214ENST00000488128 PATL2C9JE40 543 aaKnown RBP15.89■□□□□ 0.13
COL16A1-214ENST00000488128 CYP19A1P11511 503 aaPredicted RBP15.89■□□□□ 0.13
COL16A1-214ENST00000488128 ITIH6Q6UXX5 1313 aa15.89■□□□□ 0.13
COL16A1-214ENST00000488128 STK36Q9NRP7 1315 aa15.89■□□□□ 0.13
COL16A1-214ENST00000488128 KAT6BQ8WYB5 2073 aa15.89■□□□□ 0.13
COL16A1-214ENST00000488128 UBR2Q8IWV8 1755 aa15.89■□□□□ 0.13
COL16A1-214ENST00000488128 CYP2D7A0A087X1C5 515 aa15.89■□□□□ 0.13
COL16A1-214ENST00000488128 TUBBP07437 444 aa15.89■□□□□ 0.13
COL16A1-214ENST00000488128 PIK3AP1Q6ZUJ8 805 aa15.89■□□□□ 0.13
COL16A1-214ENST00000488128 ESYT3A0FGR9 886 aa15.88■□□□□ 0.13
COL16A1-214ENST00000488128 SHTN1A0MZ66 631 aa15.88■□□□□ 0.13
COL16A1-214ENST00000488128 PP2D1A8MPX8 630 aa15.88■□□□□ 0.13
COL16A1-214ENST00000488128 NDUFAB1O14561 156 aa15.88■□□□□ 0.13
COL16A1-214ENST00000488128 FECHP22830 423 aa15.88■□□□□ 0.13
COL16A1-214ENST00000488128 EP400NLQ6ZTU2 488 aa15.88■□□□□ 0.13
COL16A1-214ENST00000488128 MB21D1Q8N884 522 aa15.88■□□□□ 0.13
COL16A1-214ENST00000488128 JPH2Q9BR39 696 aaPredicted RBP15.88■□□□□ 0.13
COL16A1-214ENST00000488128 PLA2G12BQ9BX93 195 aa15.88■□□□□ 0.13
COL16A1-214ENST00000488128 MLXIPQ9HAP2 919 aa15.88■□□□□ 0.13
COL16A1-214ENST00000488128 ECM29Q5VYK3 1845 aa15.88■□□□□ 0.13
COL16A1-214ENST00000488128 TCRBV5S4A2TA0A5A2 114 aa15.88■□□□□ 0.13
COL16A1-214ENST00000488128 KRT86O43790 486 aa15.88■□□□□ 0.13
COL16A1-214ENST00000488128 KRT2P35908 639 aa15.88■□□□□ 0.13
COL16A1-214ENST00000488128 UBE3CQ15386 1083 aa15.88■□□□□ 0.13
COL16A1-214ENST00000488128 CCDC96Q2M329 555 aa15.88■□□□□ 0.13
COL16A1-214ENST00000488128 TTC38Q5R3I4 469 aa15.88■□□□□ 0.13
COL16A1-214ENST00000488128 LRWD1Q9UFC0 647 aa15.88■□□□□ 0.13
COL16A1-214ENST00000488128 RIC1Q4ADV7 1423 aa15.88■□□□□ 0.13
COL16A1-214ENST00000488128 GRIN2DO15399 1336 aa15.87■□□□□ 0.13
COL16A1-214ENST00000488128 XIRP1Q702N8 1843 aaKnown RBP15.87■□□□□ 0.13
COL16A1-214ENST00000488128 LRRC10BA6NIK2 292 aa15.87■□□□□ 0.13
COL16A1-214ENST00000488128 NCK2O43639 380 aa15.87■□□□□ 0.13
COL16A1-214ENST00000488128 APBA1Q02410 837 aa15.87■□□□□ 0.13
COL16A1-214ENST00000488128 IL17AQ16552 155 aa15.87■□□□□ 0.13
COL16A1-214ENST00000488128 NHEJ1Q9H9Q4 299 aaPredicted RBP15.87■□□□□ 0.13
COL16A1-214ENST00000488128 RWDD2AQ9UIY3 292 aa15.87■□□□□ 0.13
COL16A1-214ENST00000488128 CAPN6Q9Y6Q1 641 aa15.87■□□□□ 0.13
COL16A1-214ENST00000488128 ZSCAN5CA6NGD5 496 aaPredicted RBP15.87■□□□□ 0.13
COL16A1-214ENST00000488128 IPO7O95373 1038 aaKnown RBP15.87■□□□□ 0.13
COL16A1-214ENST00000488128 RNASE9P60153 205 aaKnown RBP15.87■□□□□ 0.13
COL16A1-214ENST00000488128 PKN1Q16512 942 aa15.87■□□□□ 0.13
COL16A1-214ENST00000488128 SLC4A8Q2Y0W8 1093 aa15.87■□□□□ 0.13
COL16A1-214ENST00000488128 PAPD7Q5XG87 772 aaKnown RBP15.87■□□□□ 0.13
COL16A1-214ENST00000488128 NFRKBQ6P4R8 1299 aa15.87■□□□□ 0.13
COL16A1-214ENST00000488128 DZIP3Q86Y13 1208 aaKnown RBP15.87■□□□□ 0.13
COL16A1-214ENST00000488128 TRIM47Q96LD4 638 aa15.87■□□□□ 0.13
COL16A1-214ENST00000488128 MYH13Q9UKX3 1938 aa15.86■□□□□ 0.13
COL16A1-214ENST00000488128 EIF3HO15372 352 aaKnown RBP eCLIP15.86■□□□□ 0.13
COL16A1-214ENST00000488128 RPN1P04843 607 aaKnown RBP15.86■□□□□ 0.13
COL16A1-214ENST00000488128 PPFIA1Q13136 1202 aa15.86■□□□□ 0.13
COL16A1-214ENST00000488128 TTMPQ5BVD1 217 aa15.86■□□□□ 0.13
COL16A1-214ENST00000488128 TNKSO95271 1327 aa15.86■□□□□ 0.13
COL16A1-214ENST00000488128 SHOX2O60902 331 aaPredicted RBP15.86■□□□□ 0.13
COL16A1-214ENST00000488128 GUCY1A3Q02108 690 aa15.86■□□□□ 0.13
COL16A1-214ENST00000488128 DHX37Q8IY37 1157 aaKnown RBP15.86■□□□□ 0.13
COL16A1-214ENST00000488128 RUFY1Q96T51 708 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms