RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 KBTBD13C9JR72 458 aa10.25□□□□□ -0.77
PRKCB-208ENST00000487674 SMIM22K7EJ46 135 aa10.25□□□□□ -0.77
PRKCB-208ENST00000487674 SEPT4O43236 478 aa10.25□□□□□ -0.77
PRKCB-208ENST00000487674 COBLO75128 1261 aa10.25□□□□□ -0.77
PRKCB-208ENST00000487674 SLC25A27O95847 323 aa10.25□□□□□ -0.77
PRKCB-208ENST00000487674 CHGBP05060 677 aa10.25□□□□□ -0.77
PRKCB-208ENST00000487674 FCER1AP12319 257 aa10.25□□□□□ -0.77
PRKCB-208ENST00000487674 EEF2P13639 858 aaKnown RBP10.25□□□□□ -0.77
PRKCB-208ENST00000487674 NCAPG2Q86XI2 1143 aa10.25□□□□□ -0.77
PRKCB-208ENST00000487674 ARRDC4Q8NCT1 418 aa10.25□□□□□ -0.77
PRKCB-208ENST00000487674 PUS7LQ9H0K6 701 aaKnown RBP10.25□□□□□ -0.77
PRKCB-208ENST00000487674 GOPCQ9HD26 462 aa10.25□□□□□ -0.77
PRKCB-208ENST00000487674 C2orf72A6NCS6 295 aa10.24□□□□□ -0.77
PRKCB-208ENST00000487674 COPB2P35606 906 aa10.24□□□□□ -0.77
PRKCB-208ENST00000487674 MDM2Q00987 491 aaPredicted RBP10.24□□□□□ -0.77
PRKCB-208ENST00000487674 TMEM132BQ14DG7 1078 aa10.24□□□□□ -0.77
PRKCB-208ENST00000487674 CTR9Q6PD62 1173 aa10.24□□□□□ -0.77
PRKCB-208ENST00000487674 DEFB123Q8N688 67 aa10.24□□□□□ -0.77
PRKCB-208ENST00000487674 GPATCH3Q96I76 525 aa10.24□□□□□ -0.77
PRKCB-208ENST00000487674 MAML3Q96JK9 1138 aa10.24□□□□□ -0.77
PRKCB-208ENST00000487674 LBHD1Q9BQE6 289 aaPredicted RBP10.24□□□□□ -0.77
PRKCB-208ENST00000487674 ECHDC1Q9NTX5 307 aa10.24□□□□□ -0.77
PRKCB-208ENST00000487674 NRBP1Q9UHY1 535 aa10.24□□□□□ -0.77
PRKCB-208ENST00000487674 PPP1R9AQ9ULJ8 1098 aa10.24□□□□□ -0.77
PRKCB-208ENST00000487674 ADAMTS5Q9UNA0 930 aa10.24□□□□□ -0.77
PRKCB-208ENST00000487674 ZNFX1Q9P2E3 1918 aaKnown RBP10.24□□□□□ -0.77
PRKCB-208ENST00000487674 VWA5AO00534 786 aa10.23□□□□□ -0.77
PRKCB-208ENST00000487674 SMARCA5O60264 1052 aaPredicted RBP10.23□□□□□ -0.77
PRKCB-208ENST00000487674 RTP1P59025 263 aa10.23□□□□□ -0.77
PRKCB-208ENST00000487674 SNX17Q15036 470 aa10.23□□□□□ -0.77
PRKCB-208ENST00000487674 SBK1Q52WX2 424 aa10.23□□□□□ -0.77
PRKCB-208ENST00000487674 GJC2Q5T442 439 aaPredicted RBP10.23□□□□□ -0.77
PRKCB-208ENST00000487674 C20orf194Q5TEA3 1177 aa10.23□□□□□ -0.77
PRKCB-208ENST00000487674 GIMAP6Q6P9H5 292 aa10.23□□□□□ -0.77
PRKCB-208ENST00000487674 RIOX2Q8IUF8 465 aa10.23□□□□□ -0.77
PRKCB-208ENST00000487674 HS6ST3Q8IZP7 471 aa10.23□□□□□ -0.77
PRKCB-208ENST00000487674 KBTBD3Q8NAB2 608 aa10.23□□□□□ -0.77
PRKCB-208ENST00000487674 STRBPQ96SI9 672 aaKnown RBP10.23□□□□□ -0.77
PRKCB-208ENST00000487674 MMP19Q99542 508 aa10.23□□□□□ -0.77
PRKCB-208ENST00000487674 FBXO28Q9NVF7 368 aa10.23□□□□□ -0.77
PRKCB-208ENST00000487674 PRKAG2Q9UGJ0 569 aa10.23□□□□□ -0.77
PRKCB-208ENST00000487674 MYH4Q9Y623 1939 aa10.23□□□□□ -0.77
PRKCB-208ENST00000487674 ZFYP08048 801 aaPredicted RBP10.22□□□□□ -0.77
PRKCB-208ENST00000487674 RASA1P20936 1047 aa10.22□□□□□ -0.77
PRKCB-208ENST00000487674 KCTD2Q14681 263 aa10.22□□□□□ -0.77
PRKCB-208ENST00000487674 FAM47AQ5JRC9 791 aa10.22□□□□□ -0.77
PRKCB-208ENST00000487674 FAM83BQ5T0W9 1011 aa10.22□□□□□ -0.77
PRKCB-208ENST00000487674 ANO1Q5XXA6 986 aa10.22□□□□□ -0.77
PRKCB-208ENST00000487674 Q7L0L9 218 aa10.22□□□□□ -0.77
PRKCB-208ENST00000487674 SLC17A8Q8NDX2 589 aa10.22□□□□□ -0.77
PRKCB-208ENST00000487674 REPS2Q8NFH8 660 aa10.22□□□□□ -0.77
PRKCB-208ENST00000487674 APPBP2Q92624 585 aa10.22□□□□□ -0.77
PRKCB-208ENST00000487674 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.22□□□□□ -0.77
PRKCB-208ENST00000487674 ZNF214Q9UL59 606 aaPredicted RBP10.22□□□□□ -0.77
PRKCB-208ENST00000487674 ATP11BQ9Y2G3 1177 aa10.22□□□□□ -0.77
PRKCB-208ENST00000487674 STXBP5LQ9Y2K9 1186 aa10.22□□□□□ -0.77
PRKCB-208ENST00000487674 DIS3Q9Y2L1 958 aaKnown RBP10.22□□□□□ -0.77
PRKCB-208ENST00000487674 GSG1L2A8MUP6 293 aa10.21□□□□□ -0.77
PRKCB-208ENST00000487674 RAD21O60216 631 aa10.21□□□□□ -0.77
PRKCB-208ENST00000487674 PGK2P07205 417 aa10.21□□□□□ -0.77
PRKCB-208ENST00000487674 NUDT7P0C024 238 aa10.21□□□□□ -0.77
PRKCB-208ENST00000487674 RARBP10826 455 aa10.21□□□□□ -0.77
PRKCB-208ENST00000487674 STAT3P40763 770 aa10.21□□□□□ -0.77
PRKCB-208ENST00000487674 LRRC41Q15345 812 aa10.21□□□□□ -0.77
PRKCB-208ENST00000487674 PRAMEF19Q5SWL8 479 aa10.21□□□□□ -0.77
PRKCB-208ENST00000487674 C1orf53Q5VUE5 145 aa10.21□□□□□ -0.77
PRKCB-208ENST00000487674 SLC39A5Q6ZMH5 540 aa10.21□□□□□ -0.77
PRKCB-208ENST00000487674 OSBP2Q969R2 916 aa10.21□□□□□ -0.77
PRKCB-208ENST00000487674 SLF1Q9BQI6 1058 aa10.21□□□□□ -0.77
PRKCB-208ENST00000487674 TINF2Q9BSI4 451 aa10.21□□□□□ -0.77
PRKCB-208ENST00000487674 TEX13BQ9BXU2 312 aa10.21□□□□□ -0.77
PRKCB-208ENST00000487674 MKNK2Q9HBH9 465 aa10.21□□□□□ -0.77
PRKCB-208ENST00000487674 MTMR10Q9NXD2 777 aa10.21□□□□□ -0.77
PRKCB-208ENST00000487674 NYAP2Q9P242 653 aa10.21□□□□□ -0.77
PRKCB-208ENST00000487674 RNF113AO15541 343 aaKnown RBP10.2□□□□□ -0.78
PRKCB-208ENST00000487674 GPAA1O43292 621 aa10.2□□□□□ -0.78
PRKCB-208ENST00000487674 NDUFB10O96000 172 aa10.2□□□□□ -0.78
PRKCB-208ENST00000487674 GNAT2P19087 354 aa10.2□□□□□ -0.78
PRKCB-208ENST00000487674 ADCYAP1R1P41586 468 aa10.2□□□□□ -0.78
PRKCB-208ENST00000487674 TDO2P48775 406 aa10.2□□□□□ -0.78
PRKCB-208ENST00000487674 LSM11P83369 360 aaKnown RBP eCLIP10.2□□□□□ -0.78
PRKCB-208ENST00000487674 LRRFIP1Q32MZ4 808 aaKnown RBP10.2□□□□□ -0.78
PRKCB-208ENST00000487674 ZNF792Q3KQV3 632 aa10.2□□□□□ -0.78
PRKCB-208ENST00000487674 TRIM60Q495X7 471 aa10.2□□□□□ -0.78
PRKCB-208ENST00000487674 TSHZ3Q63HK5 1081 aa10.2□□□□□ -0.78
PRKCB-208ENST00000487674 MSL3Q8N5Y2 521 aaKnown RBP10.2□□□□□ -0.78
PRKCB-208ENST00000487674 PLIN4Q96Q06 1357 aa10.2□□□□□ -0.78
PRKCB-208ENST00000487674 NUP88Q99567 741 aaPredicted RBP10.2□□□□□ -0.78
PRKCB-208ENST00000487674 DCTPP1Q9H773 170 aa10.2□□□□□ -0.78
PRKCB-208ENST00000487674 ZNF287Q9HBT7 754 aa10.2□□□□□ -0.78
PRKCB-208ENST00000487674 EPB41L4AQ9HCS5 686 aaPredicted RBP10.2□□□□□ -0.78
PRKCB-208ENST00000487674 XPNPEP3Q9NQH7 507 aa10.2□□□□□ -0.78
PRKCB-208ENST00000487674 PRDM5Q9NQX1 630 aaPredicted RBP10.2□□□□□ -0.78
PRKCB-208ENST00000487674 SYNPO2Q9UMS6 1093 aa10.2□□□□□ -0.78
PRKCB-208ENST00000487674 PHF24Q9UPV7 400 aa10.2□□□□□ -0.78
PRKCB-208ENST00000487674 SMCHD1A6NHR9 2005 aa10.19□□□□□ -0.78
PRKCB-208ENST00000487674 COL6A3P12111 3177 aa10.19□□□□□ -0.78
PRKCB-208ENST00000487674 TTC41PQ6P2S7 1318 aa10.19□□□□□ -0.78
PRKCB-208ENST00000487674 SYNGAP1Q96PV0 1343 aa10.19□□□□□ -0.78
PRKCB-208ENST00000487674 IGKV6D-41A0A0C4DH26 115 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms