RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 ZNF669Q96BR6 464 aaPredicted RBP6.38□□□□□ -1.39
VPS13A-211ENST00000484581 FEZ1Q99689 392 aa6.38□□□□□ -1.39
VPS13A-211ENST00000484581 CNTNAP4Q9C0A0 1308 aa6.37□□□□□ -1.39
VPS13A-211ENST00000484581 PRR36Q9H6K5 1346 aa6.37□□□□□ -1.39
VPS13A-211ENST00000484581 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.37□□□□□ -1.39
VPS13A-211ENST00000484581 NKG7Q16617 165 aa6.37□□□□□ -1.39
VPS13A-211ENST00000484581 TAB3Q8N5C8 712 aaPredicted RBP6.37□□□□□ -1.39
VPS13A-211ENST00000484581 XAGE3Q8WTP9 111 aa6.37□□□□□ -1.39
VPS13A-211ENST00000484581 TM9SF2Q99805 663 aa6.37□□□□□ -1.39
VPS13A-211ENST00000484581 KRTAP17-1Q9BYP8 105 aa6.37□□□□□ -1.39
VPS13A-211ENST00000484581 ZSWIM5Q9P217 1185 aa6.37□□□□□ -1.39
VPS13A-211ENST00000484581 CAPN6Q9Y6Q1 641 aa6.37□□□□□ -1.39
VPS13A-211ENST00000484581 A0A1W2PQH9 124 aa6.36□□□□□ -1.39
VPS13A-211ENST00000484581 MARCH6O60337 910 aa6.36□□□□□ -1.39
VPS13A-211ENST00000484581 GRIN3BO60391 1043 aa6.36□□□□□ -1.39
VPS13A-211ENST00000484581 DDAH1O94760 285 aa6.36□□□□□ -1.39
VPS13A-211ENST00000484581 TSPAN15O95858 294 aa6.36□□□□□ -1.39
VPS13A-211ENST00000484581 CST3P01034 146 aaPredicted RBP6.36□□□□□ -1.39
VPS13A-211ENST00000484581 RAC2P15153 192 aa6.36□□□□□ -1.39
VPS13A-211ENST00000484581 GUCY2CP25092 1073 aa6.36□□□□□ -1.39
VPS13A-211ENST00000484581 GRK4P32298 578 aa6.36□□□□□ -1.39
VPS13A-211ENST00000484581 PPP2R5EQ16537 467 aa6.36□□□□□ -1.39
VPS13A-211ENST00000484581 PRAMEF13Q5VWM6 474 aa6.36□□□□□ -1.39
VPS13A-211ENST00000484581 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.36□□□□□ -1.39
VPS13A-211ENST00000484581 SYNPOQ8N3V7 929 aa6.36□□□□□ -1.39
VPS13A-211ENST00000484581 COX4I2Q96KJ9 171 aa6.36□□□□□ -1.39
VPS13A-211ENST00000484581 ALPK1Q96QP1 1244 aa6.36□□□□□ -1.39
VPS13A-211ENST00000484581 CWC22Q9HCG8 908 aaKnown RBP6.36□□□□□ -1.39
VPS13A-211ENST00000484581 ST14Q9Y5Y6 855 aa6.36□□□□□ -1.39
VPS13A-211ENST00000484581 SLC12A7Q9Y666 1083 aa6.36□□□□□ -1.39
VPS13A-211ENST00000484581 NFIBO00712 420 aa6.35□□□□□ -1.39
VPS13A-211ENST00000484581 CFPP27918 469 aa6.35□□□□□ -1.39
VPS13A-211ENST00000484581 KIR3DL1P43629 444 aa6.35□□□□□ -1.39
VPS13A-211ENST00000484581 C6orf15Q6UXA7 325 aaPredicted RBP6.35□□□□□ -1.39
VPS13A-211ENST00000484581 TTC6Q86TZ1 520 aa6.35□□□□□ -1.39
VPS13A-211ENST00000484581 FAM178BQ8IXR5 827 aa6.35□□□□□ -1.39
VPS13A-211ENST00000484581 DIRC2Q96SL1 478 aa6.35□□□□□ -1.39
VPS13A-211ENST00000484581 SLAMF8Q9P0V8 285 aa6.35□□□□□ -1.39
VPS13A-211ENST00000484581 PTCH2Q9Y6C5 1203 aa6.35□□□□□ -1.39
VPS13A-211ENST00000484581 KDM2BQ8NHM5 1336 aa6.34□□□□□ -1.39
VPS13A-211ENST00000484581 UPK3BL1B0FP48 263 aa6.34□□□□□ -1.39
VPS13A-211ENST00000484581 B2RBV5 119 aa6.34□□□□□ -1.39
VPS13A-211ENST00000484581 UPK3BL2E5RIL1 263 aa6.34□□□□□ -1.39
VPS13A-211ENST00000484581 HTR3BO95264 441 aa6.34□□□□□ -1.39
VPS13A-211ENST00000484581 TMEM253P0C7T8 217 aa6.34□□□□□ -1.39
VPS13A-211ENST00000484581 CDK8P49336 464 aa6.34□□□□□ -1.39
VPS13A-211ENST00000484581 GYS2P54840 703 aa6.34□□□□□ -1.39
VPS13A-211ENST00000484581 SSRP1Q08945 709 aaKnown RBP6.34□□□□□ -1.39
VPS13A-211ENST00000484581 MLECQ14165 292 aa6.34□□□□□ -1.39
VPS13A-211ENST00000484581 TCEA2Q15560 299 aa6.34□□□□□ -1.39
VPS13A-211ENST00000484581 RUFY4Q6ZNE9 571 aa6.34□□□□□ -1.39
VPS13A-211ENST00000484581 CDH24Q86UP0 819 aa6.34□□□□□ -1.39
VPS13A-211ENST00000484581 LRRC56Q8IYG6 542 aaPredicted RBP6.34□□□□□ -1.39
VPS13A-211ENST00000484581 FBXO15Q8NCQ5 510 aaPredicted RBP6.34□□□□□ -1.39
VPS13A-211ENST00000484581 ABHD4Q8TB40 342 aa6.34□□□□□ -1.39
VPS13A-211ENST00000484581 NSUN3Q9H649 340 aaKnown RBP6.34□□□□□ -1.39
VPS13A-211ENST00000484581 C19orf73Q9NVV2 129 aa6.34□□□□□ -1.39
VPS13A-211ENST00000484581 KLHL42Q9P2K6 505 aa6.34□□□□□ -1.39
VPS13A-211ENST00000484581 ZMYM5Q9UJ78 669 aa6.34□□□□□ -1.39
VPS13A-211ENST00000484581 TACC3Q9Y6A5 838 aa6.34□□□□□ -1.39
VPS13A-211ENST00000484581 GFRA2O00451 464 aa6.33□□□□□ -1.4
VPS13A-211ENST00000484581 AMPD3Q01432 767 aa6.33□□□□□ -1.4
VPS13A-211ENST00000484581 TKFCQ3LXA3 575 aa6.33□□□□□ -1.4
VPS13A-211ENST00000484581 MRM1Q6IN84 353 aaKnown RBP6.33□□□□□ -1.4
VPS13A-211ENST00000484581 SPATC1Q76KD6 591 aa6.33□□□□□ -1.4
VPS13A-211ENST00000484581 RPUSD2Q8IZ73 545 aaKnown RBP6.33□□□□□ -1.4
VPS13A-211ENST00000484581 ANTXR1Q9H6X2 564 aa6.33□□□□□ -1.4
VPS13A-211ENST00000484581 GMIPQ9P107 970 aa6.33□□□□□ -1.4
VPS13A-211ENST00000484581 DIAPH1O60610 1272 aaKnown RBP6.32□□□□□ -1.4
VPS13A-211ENST00000484581 PGRP06401 933 aa6.32□□□□□ -1.4
VPS13A-211ENST00000484581 C1QTNF9P0C862 333 aa6.32□□□□□ -1.4
VPS13A-211ENST00000484581 ETV3P41162 512 aa6.32□□□□□ -1.4
VPS13A-211ENST00000484581 TNK2Q07912 1038 aa6.32□□□□□ -1.4
VPS13A-211ENST00000484581 NCAPHQ15003 741 aa6.32□□□□□ -1.4
VPS13A-211ENST00000484581 OVOS1Q6IE37 1185 aa6.32□□□□□ -1.4
VPS13A-211ENST00000484581 EEPD1Q7L9B9 569 aa6.32□□□□□ -1.4
VPS13A-211ENST00000484581 TMPRSS7Q7RTY8 843 aa6.32□□□□□ -1.4
VPS13A-211ENST00000484581 CILP2Q8IUL8 1156 aa6.32□□□□□ -1.4
VPS13A-211ENST00000484581 ZSWIM2Q8NEG5 633 aa6.32□□□□□ -1.4
VPS13A-211ENST00000484581 CHMP4AQ9BY43 222 aa6.32□□□□□ -1.4
VPS13A-211ENST00000484581 DCP1AQ9NPI6 582 aaPredicted RBP6.32□□□□□ -1.4
VPS13A-211ENST00000484581 REV1Q9UBZ9 1251 aa6.32□□□□□ -1.4
VPS13A-211ENST00000484581 PFDN2Q9UHV9 154 aa6.32□□□□□ -1.4
VPS13A-211ENST00000484581 PLAAQ9Y263 795 aa6.32□□□□□ -1.4
VPS13A-211ENST00000484581 TNFRSF10CO14798 259 aa6.31□□□□□ -1.4
VPS13A-211ENST00000484581 VIL1P09327 827 aaKnown RBP6.31□□□□□ -1.4
VPS13A-211ENST00000484581 MASP1P48740 699 aa6.31□□□□□ -1.4
VPS13A-211ENST00000484581 PDE4BQ07343 736 aa6.31□□□□□ -1.4
VPS13A-211ENST00000484581 LONRF2Q1L5Z9 754 aa6.31□□□□□ -1.4
VPS13A-211ENST00000484581 INTS3Q68E01 1043 aaKnown RBP6.31□□□□□ -1.4
VPS13A-211ENST00000484581 SLC6A19Q695T7 634 aa6.31□□□□□ -1.4
VPS13A-211ENST00000484581 NOL8Q76FK4 1167 aaKnown RBP6.31□□□□□ -1.4
VPS13A-211ENST00000484581 NLRC3Q7RTR2 1065 aa6.31□□□□□ -1.4
VPS13A-211ENST00000484581 CREG2Q8IUH2 290 aa6.31□□□□□ -1.4
VPS13A-211ENST00000484581 SIAH1Q8IUQ4 282 aa6.31□□□□□ -1.4
VPS13A-211ENST00000484581 PIWIL2Q8TC59 973 aaKnown RBP6.31□□□□□ -1.4
VPS13A-211ENST00000484581 MYLIPQ8WY64 445 aa6.31□□□□□ -1.4
VPS13A-211ENST00000484581 EPN3Q9H201 632 aa6.31□□□□□ -1.4
VPS13A-211ENST00000484581 EPB41L4BQ9H329 900 aa6.31□□□□□ -1.4
VPS13A-211ENST00000484581 PHAXQ9H814 394 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms