RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, human

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP50-215	ENST00000484186	KIFC2	Q96AC6	838 aa		11.2	□□□□□ -0.62
NUP50-215	ENST00000484186	TINF2	Q9BSI4	451 aa		11.2	□□□□□ -0.62
NUP50-215	ENST00000484186	RWDD1	Q9H446	243 aa	Predicted RBP	11.2	□□□□□ -0.62
NUP50-215	ENST00000484186	INCENP	Q9NQS7	918 aa		11.2	□□□□□ -0.62
NUP50-215	ENST00000484186	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
NUP50-215	ENST00000484186	RIPK3	Q9Y572	518 aa		11.2	□□□□□ -0.62
NUP50-215	ENST00000484186	ZNFX1	Q9P2E3	1918 aa	Known RBP	11.19	□□□□□ -0.62
NUP50-215	ENST00000484186	COL11A1	P12107	1806 aa	Predicted RBP	11.19	□□□□□ -0.62
NUP50-215	ENST00000484186	TSPY2	A6NKD2	308 aa		11.19	□□□□□ -0.62
NUP50-215	ENST00000484186	TMEM232	C9JQI7	657 aa		11.19	□□□□□ -0.62
NUP50-215	ENST00000484186	KBTBD13	C9JR72	458 aa		11.19	□□□□□ -0.62
NUP50-215	ENST00000484186	FDX1	P10109	184 aa		11.19	□□□□□ -0.62
NUP50-215	ENST00000484186	BMP3	P12645	472 aa		11.19	□□□□□ -0.62
NUP50-215	ENST00000484186	MAGEA10	P43363	369 aa	Predicted RBP	11.19	□□□□□ -0.62
NUP50-215	ENST00000484186	SLC4A3	P48751	1232 aa		11.19	□□□□□ -0.62
NUP50-215	ENST00000484186	ATN1	P54259	1190 aa	Predicted RBP	11.19	□□□□□ -0.62
NUP50-215	ENST00000484186	MCMDC2	Q4G0Z9	681 aa		11.19	□□□□□ -0.62
NUP50-215	ENST00000484186	VPS53	Q5VIR6	699 aa		11.19	□□□□□ -0.62
NUP50-215	ENST00000484186	SMC5	Q8IY18	1101 aa		11.19	□□□□□ -0.62
NUP50-215	ENST00000484186	DDX11	Q96FC9	970 aa		11.19	□□□□□ -0.62
NUP50-215	ENST00000484186	LNPK	Q9C0E8	428 aa		11.19	□□□□□ -0.62
NUP50-215	ENST00000484186	SLC38A10	Q9HBR0	1119 aa		11.19	□□□□□ -0.62
NUP50-215	ENST00000484186	RAVER2	Q9HCJ3	691 aa	Known RBP	11.19	□□□□□ -0.62
NUP50-215	ENST00000484186	ANAPC4	Q9UJX5	808 aa		11.19	□□□□□ -0.62
NUP50-215	ENST00000484186	TRIM6-TRIM34	B2RNG4	842 aa		11.18	□□□□□ -0.62
NUP50-215	ENST00000484186	FGA	P02671	866 aa		11.18	□□□□□ -0.62
NUP50-215	ENST00000484186	TAL1	P17542	331 aa	Predicted RBP	11.18	□□□□□ -0.62
NUP50-215	ENST00000484186	STAT2	P52630	851 aa		11.18	□□□□□ -0.62
NUP50-215	ENST00000484186	OAZ1	P54368	228 aa		11.18	□□□□□ -0.62
NUP50-215	ENST00000484186	LRRC41	Q15345	812 aa		11.18	□□□□□ -0.62
NUP50-215	ENST00000484186	B4GALNT3	Q6L9W6	998 aa		11.18	□□□□□ -0.62
NUP50-215	ENST00000484186	SLC39A5	Q6ZMH5	540 aa		11.18	□□□□□ -0.62
NUP50-215	ENST00000484186	MSL3	Q8N5Y2	521 aa	Known RBP	11.18	□□□□□ -0.62
NUP50-215	ENST00000484186	CHURC1	Q8WUH1	139 aa		11.18	□□□□□ -0.62
NUP50-215	ENST00000484186	GMCL1	Q96IK5	515 aa		11.18	□□□□□ -0.62
NUP50-215	ENST00000484186	FAM227B	Q96M60	508 aa		11.18	□□□□□ -0.62
NUP50-215	ENST00000484186	IL17RB	Q9NRM6	502 aa		11.18	□□□□□ -0.62
NUP50-215	ENST00000484186	FBXO40	Q9UH90	709 aa		11.18	□□□□□ -0.62
NUP50-215	ENST00000484186	TACC3	Q9Y6A5	838 aa		11.18	□□□□□ -0.62
NUP50-215	ENST00000484186	FRMPD3	Q5JV73	1810 aa		11.18	□□□□□ -0.62
NUP50-215	ENST00000484186	MYH4	Q9Y623	1939 aa		11.17	□□□□□ -0.62
NUP50-215	ENST00000484186	DNAJC25-GNG10	A0A024R161	153 aa		11.17	□□□□□ -0.62
NUP50-215	ENST00000484186		A0A0D9SFI3	127 aa		11.17	□□□□□ -0.62
NUP50-215	ENST00000484186	ORC4	O43929	436 aa		11.17	□□□□□ -0.62
NUP50-215	ENST00000484186	RANBP6	O60518	1105 aa	Known RBP	11.17	□□□□□ -0.62
NUP50-215	ENST00000484186	PLA2G6	O60733	806 aa		11.17	□□□□□ -0.62
NUP50-215	ENST00000484186	IGHD	P01880	384 aa		11.17	□□□□□ -0.62
NUP50-215	ENST00000484186	MYCN	P04198	464 aa	Predicted RBP	11.17	□□□□□ -0.62
NUP50-215	ENST00000484186	FGR	P09769	529 aa		11.17	□□□□□ -0.62
NUP50-215	ENST00000484186	ZNF865	P0CJ78	1059 aa	Predicted RBP	11.17	□□□□□ -0.62
NUP50-215	ENST00000484186	RARB	P10826	455 aa		11.17	□□□□□ -0.62
NUP50-215	ENST00000484186	MCC	P23508	829 aa		11.17	□□□□□ -0.62
NUP50-215	ENST00000484186	SLC1A4	P43007	532 aa		11.17	□□□□□ -0.62
NUP50-215	ENST00000484186	RTP1	P59025	263 aa		11.17	□□□□□ -0.62
NUP50-215	ENST00000484186	RCSD1	Q6JBY9	416 aa		11.17	□□□□□ -0.62
NUP50-215	ENST00000484186	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.17	□□□□□ -0.62
NUP50-215	ENST00000484186	FAM160B2	Q86V87	743 aa		11.17	□□□□□ -0.62
NUP50-215	ENST00000484186	CHD1L	Q86WJ1	897 aa		11.17	□□□□□ -0.62
NUP50-215	ENST00000484186	ANKRD35	Q8N283	1001 aa		11.17	□□□□□ -0.62
NUP50-215	ENST00000484186	CHST13	Q8NET6	341 aa		11.17	□□□□□ -0.62
NUP50-215	ENST00000484186	EXOC6	Q8TAG9	804 aa		11.17	□□□□□ -0.62
NUP50-215	ENST00000484186	STAG1	Q8WVM7	1258 aa		11.17	□□□□□ -0.62
NUP50-215	ENST00000484186	RILPL2	Q969X0	211 aa		11.17	□□□□□ -0.62
NUP50-215	ENST00000484186	UBE2O	Q9C0C9	1292 aa	Known RBP	11.17	□□□□□ -0.62
NUP50-215	ENST00000484186	ISY1	Q9ULR0	285 aa	Known RBP	11.17	□□□□□ -0.62
NUP50-215	ENST00000484186	STX8	Q9UNK0	236 aa		11.17	□□□□□ -0.62
NUP50-215	ENST00000484186	CNPY2	Q9Y2B0	182 aa		11.17	□□□□□ -0.62
NUP50-215	ENST00000484186	SYNGAP1	Q96PV0	1343 aa		11.16	□□□□□ -0.62
NUP50-215	ENST00000484186	SOX1	O00570	391 aa	Predicted RBP	11.16	□□□□□ -0.62
NUP50-215	ENST00000484186	NMT2	O60551	498 aa		11.16	□□□□□ -0.62
NUP50-215	ENST00000484186	SNAI1	O95863	264 aa	Predicted RBP	11.16	□□□□□ -0.62
NUP50-215	ENST00000484186	HSPD1	P10809	573 aa	Known RBP	11.16	□□□□□ -0.62
NUP50-215	ENST00000484186	AKR1A1	P14550	325 aa		11.16	□□□□□ -0.62
NUP50-215	ENST00000484186	ADCYAP1R1	P41586	468 aa		11.16	□□□□□ -0.62
NUP50-215	ENST00000484186	NOV	P48745	357 aa		11.16	□□□□□ -0.62
NUP50-215	ENST00000484186	MDM2	Q00987	491 aa	Predicted RBP	11.16	□□□□□ -0.62
NUP50-215	ENST00000484186	NUCB1	Q02818	461 aa		11.16	□□□□□ -0.62
NUP50-215	ENST00000484186	IK	Q13123	557 aa	Predicted RBP	11.16	□□□□□ -0.62
NUP50-215	ENST00000484186	NMI	Q13287	307 aa	Predicted RBP	11.16	□□□□□ -0.62
NUP50-215	ENST00000484186	MAMDC4	Q6UXC1	1216 aa		11.16	□□□□□ -0.62
NUP50-215	ENST00000484186	ZNF467	Q7Z7K2	595 aa	Predicted RBP	11.16	□□□□□ -0.62
NUP50-215	ENST00000484186	RNF180	Q86T96	592 aa		11.16	□□□□□ -0.62
NUP50-215	ENST00000484186	ZNF589	Q86UQ0	364 aa	Predicted RBP	11.16	□□□□□ -0.62
NUP50-215	ENST00000484186	PLEKHM2	Q8IWE5	1019 aa		11.16	□□□□□ -0.62
NUP50-215	ENST00000484186	TDH	Q8IZJ6	230 aa		11.16	□□□□□ -0.62
NUP50-215	ENST00000484186	CHMP4C	Q96CF2	233 aa		11.16	□□□□□ -0.62
NUP50-215	ENST00000484186	OSBPL3	Q9H4L5	887 aa		11.16	□□□□□ -0.62
NUP50-215	ENST00000484186	XPNPEP3	Q9NQH7	507 aa		11.16	□□□□□ -0.62
NUP50-215	ENST00000484186	TOMM22	Q9NS69	142 aa		11.16	□□□□□ -0.62
NUP50-215	ENST00000484186	FAM184B	Q9ULE4	1060 aa		11.16	□□□□□ -0.62
NUP50-215	ENST00000484186	ATP11B	Q9Y2G3	1177 aa		11.16	□□□□□ -0.62
NUP50-215	ENST00000484186	PGK1	P00558	417 aa		11.15	□□□□□ -0.62
NUP50-215	ENST00000484186	SDS	P20132	328 aa		11.15	□□□□□ -0.62
NUP50-215	ENST00000484186	TKFC	Q3LXA3	575 aa		11.15	□□□□□ -0.62
NUP50-215	ENST00000484186	LRIT3	Q3SXY7	679 aa		11.15	□□□□□ -0.62
NUP50-215	ENST00000484186	C1orf53	Q5VUE5	145 aa		11.15	□□□□□ -0.62
NUP50-215	ENST00000484186	KCTD1	Q719H9	257 aa		11.15	□□□□□ -0.62
NUP50-215	ENST00000484186	FERMT2	Q96AC1	680 aa		11.15	□□□□□ -0.62
NUP50-215	ENST00000484186	LRCH3	Q96II8	777 aa		11.15	□□□□□ -0.62
NUP50-215	ENST00000484186	AGBL1	Q96MI9	1066 aa		11.15	□□□□□ -0.62

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