RNA–Protein interactions for RNA: ENST00000483021.5

R3HDM1-215, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-215ENST00000483021 ZBED4O75132 1171 aa23.18■■□□□ 1.3
R3HDM1-215ENST00000483021 RARBP10826 455 aa23.18■■□□□ 1.3
R3HDM1-215ENST00000483021 RTP1P59025 263 aa23.18■■□□□ 1.3
R3HDM1-215ENST00000483021 PPARAQ07869 468 aa23.18■■□□□ 1.3
R3HDM1-215ENST00000483021 FAM47AQ5JRC9 791 aa23.18■■□□□ 1.3
R3HDM1-215ENST00000483021 PPP4R3BQ5MIZ7 849 aa23.18■■□□□ 1.3
R3HDM1-215ENST00000483021 MSL3Q8N5Y2 521 aaKnown RBP23.18■■□□□ 1.3
R3HDM1-215ENST00000483021 NEDD1Q8NHV4 660 aa23.18■■□□□ 1.3
R3HDM1-215ENST00000483021 FEM1BQ9UK73 627 aa23.18■■□□□ 1.3
R3HDM1-215ENST00000483021 MYCNP04198 464 aaPredicted RBP23.17■■□□□ 1.3
R3HDM1-215ENST00000483021 MDM2Q00987 491 aaPredicted RBP23.17■■□□□ 1.3
R3HDM1-215ENST00000483021 LRRC41Q15345 812 aa23.17■■□□□ 1.3
R3HDM1-215ENST00000483021 LRRC47Q8N1G4 583 aaKnown RBP23.17■■□□□ 1.3
R3HDM1-215ENST00000483021 XPNPEP3Q9NQH7 507 aa23.17■■□□□ 1.3
R3HDM1-215ENST00000483021 CNPY2Q9Y2B0 182 aa23.17■■□□□ 1.3
R3HDM1-215ENST00000483021 COL6A3P12111 3177 aa23.16■■□□□ 1.3
R3HDM1-215ENST00000483021 LAMA2P24043 3122 aaKnown RBP23.16■■□□□ 1.3
R3HDM1-215ENST00000483021 OAZ1P54368 228 aa23.16■■□□□ 1.3
R3HDM1-215ENST00000483021 SNX17Q15036 470 aa23.16■■□□□ 1.3
R3HDM1-215ENST00000483021 SLC39A5Q6ZMH5 540 aa23.16■■□□□ 1.3
R3HDM1-215ENST00000483021 KIFC2Q96AC6 838 aa23.16■■□□□ 1.3
R3HDM1-215ENST00000483021 DDX11Q96FC9 970 aa23.16■■□□□ 1.3
R3HDM1-215ENST00000483021 SLC38A10Q9HBR0 1119 aa23.16■■□□□ 1.3
R3HDM1-215ENST00000483021 ATP11BQ9Y2G3 1177 aa23.16■■□□□ 1.3
R3HDM1-215ENST00000483021 FDX1P10109 184 aa23.15■■□□□ 1.3
R3HDM1-215ENST00000483021 AKR1A1P14550 325 aa23.15■■□□□ 1.3
R3HDM1-215ENST00000483021 ANKRD45Q5TZF3 282 aa23.15■■□□□ 1.3
R3HDM1-215ENST00000483021 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.15■■□□□ 1.3
R3HDM1-215ENST00000483021 RNF180Q86T96 592 aa23.15■■□□□ 1.3
R3HDM1-215ENST00000483021 CPXCR1Q8N123 301 aa23.15■■□□□ 1.3
R3HDM1-215ENST00000483021 EVI5LQ96CN4 794 aa23.15■■□□□ 1.3
R3HDM1-215ENST00000483021 FBXO40Q9UH90 709 aa23.15■■□□□ 1.3
R3HDM1-215ENST00000483021 SYNGAP1Q96PV0 1343 aa23.14■■□□□ 1.3
R3HDM1-215ENST00000483021 BMP3P12645 472 aa23.14■■□□□ 1.29
R3HDM1-215ENST00000483021 ADCYAP1R1P41586 468 aa23.14■■□□□ 1.29
R3HDM1-215ENST00000483021 TFAP4Q01664 338 aa23.14■■□□□ 1.29
R3HDM1-215ENST00000483021 C1orf53Q5VUE5 145 aa23.14■■□□□ 1.29
R3HDM1-215ENST00000483021 SLFN13Q68D06 897 aa23.14■■□□□ 1.29
R3HDM1-215ENST00000483021 CRBNQ96SW2 442 aa23.14■■□□□ 1.29
R3HDM1-215ENST00000483021 RIPK3Q9Y572 518 aa23.14■■□□□ 1.29
R3HDM1-215ENST00000483021 MCM3APO60318 1980 aa23.13■■□□□ 1.29
R3HDM1-215ENST00000483021 DNAJC25-GNG10A0A024R161 153 aa23.13■■□□□ 1.29
R3HDM1-215ENST00000483021 ZNF865P0CJ78 1059 aaPredicted RBP23.13■■□□□ 1.29
R3HDM1-215ENST00000483021 HDAC1Q13547 482 aaPredicted RBP23.13■■□□□ 1.29
R3HDM1-215ENST00000483021 MAMDC4Q6UXC1 1216 aa23.13■■□□□ 1.29
R3HDM1-215ENST00000483021 ZNF467Q7Z7K2 595 aaPredicted RBP23.13■■□□□ 1.29
R3HDM1-215ENST00000483021 CHST13Q8NET6 341 aa23.13■■□□□ 1.29
R3HDM1-215ENST00000483021 PHF24Q9UPV7 400 aa23.13■■□□□ 1.29
R3HDM1-215ENST00000483021 STAT2P52630 851 aa23.12■■□□□ 1.29
R3HDM1-215ENST00000483021 TICAM2Q86XR7 235 aa23.12■■□□□ 1.29
R3HDM1-215ENST00000483021 GMCL1Q96IK5 515 aa23.12■■□□□ 1.29
R3HDM1-215ENST00000483021 RAVER2Q9HCJ3 691 aaKnown RBP23.12■■□□□ 1.29
R3HDM1-215ENST00000483021 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.12■■□□□ 1.29
R3HDM1-215ENST00000483021 TSPY2A6NKD2 308 aa23.11■■□□□ 1.29
R3HDM1-215ENST00000483021 TAL1P17542 331 aaPredicted RBP23.11■■□□□ 1.29
R3HDM1-215ENST00000483021 SLC4A3P48751 1232 aa23.11■■□□□ 1.29
R3HDM1-215ENST00000483021 TRIM60Q495X7 471 aa23.11■■□□□ 1.29
R3HDM1-215ENST00000483021 CCDC129Q6ZRS4 1044 aa23.11■■□□□ 1.29
R3HDM1-215ENST00000483021 FAM160B2Q86V87 743 aa23.11■■□□□ 1.29
R3HDM1-215ENST00000483021 ANKRD35Q8N283 1001 aa23.11■■□□□ 1.29
R3HDM1-215ENST00000483021 FERMT2Q96AC1 680 aa23.11■■□□□ 1.29
R3HDM1-215ENST00000483021 ISY1Q9ULR0 285 aaKnown RBP23.11■■□□□ 1.29
R3HDM1-215ENST00000483021 FOXP2O15409 715 aa23.1■■□□□ 1.29
R3HDM1-215ENST00000483021 PGK1P00558 417 aa23.1■■□□□ 1.29
R3HDM1-215ENST00000483021 SLC1A4P43007 532 aa23.1■■□□□ 1.29
R3HDM1-215ENST00000483021 PDE1AP54750 535 aa23.1■■□□□ 1.29
R3HDM1-215ENST00000483021 AAMPQ13685 434 aa23.1■■□□□ 1.29
R3HDM1-215ENST00000483021 DEFB123Q8N688 67 aa23.1■■□□□ 1.29
R3HDM1-215ENST00000483021 CHURC1Q8WUH1 139 aa23.1■■□□□ 1.29
R3HDM1-215ENST00000483021 PRDM5Q9NQX1 630 aaPredicted RBP23.1■■□□□ 1.29
R3HDM1-215ENST00000483021 HELLSQ9NRZ9 838 aa23.1■■□□□ 1.29
R3HDM1-215ENST00000483021 ANAPC4Q9UJX5 808 aa23.1■■□□□ 1.29
R3HDM1-215ENST00000483021 FAM184BQ9ULE4 1060 aa23.1■■□□□ 1.29
R3HDM1-215ENST00000483021 STX8Q9UNK0 236 aa23.1■■□□□ 1.29
R3HDM1-215ENST00000483021 TMEM232C9JQI7 657 aa23.09■■□□□ 1.29
R3HDM1-215ENST00000483021 ZHX1Q9UKY1 873 aaPredicted RBP23.09■■□□□ 1.29
R3HDM1-215ENST00000483021 PLA2G6O60733 806 aa23.08■■□□□ 1.29
R3HDM1-215ENST00000483021 ADAMTS4O75173 837 aa23.08■■□□□ 1.29
R3HDM1-215ENST00000483021 SNAI1O95863 264 aaPredicted RBP23.08■■□□□ 1.29
R3HDM1-215ENST00000483021 CTDSPL2Q05D32 466 aa23.08■■□□□ 1.29
R3HDM1-215ENST00000483021 IKQ13123 557 aaPredicted RBP23.08■■□□□ 1.29
R3HDM1-215ENST00000483021 STAG1Q8WVM7 1258 aa23.08■■□□□ 1.29
R3HDM1-215ENST00000483021 TSEN34Q9BSV6 310 aaKnown RBP23.08■■□□□ 1.29
R3HDM1-215ENST00000483021 ACAD9Q9H845 621 aa23.08■■□□□ 1.29
R3HDM1-215ENST00000483021 PDLIM7Q9NR12 457 aa23.08■■□□□ 1.29
R3HDM1-215ENST00000483021 SYNRGQ9UMZ2 1314 aa23.08■■□□□ 1.28
R3HDM1-215ENST00000483021 A0A1W2PQ45 241 aaPredicted RBP23.07■■□□□ 1.28
R3HDM1-215ENST00000483021 A0A1W2PQY0 241 aa23.07■■□□□ 1.28
R3HDM1-215ENST00000483021 ALX1Q15699 326 aa23.07■■□□□ 1.28
R3HDM1-215ENST00000483021 VPS53Q5VIR6 699 aa23.07■■□□□ 1.28
R3HDM1-215ENST00000483021 ABHD16BQ9H3Z7 469 aa23.07■■□□□ 1.28
R3HDM1-215ENST00000483021 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.07■■□□□ 1.28
R3HDM1-215ENST00000483021 ORC4O43929 436 aa23.06■■□□□ 1.28
R3HDM1-215ENST00000483021 DUSP11O75319 330 aaKnown RBP23.06■■□□□ 1.28
R3HDM1-215ENST00000483021 TKFCQ3LXA3 575 aa23.06■■□□□ 1.28
R3HDM1-215ENST00000483021 LENG1Q96BZ8 264 aaPredicted RBP23.06■■□□□ 1.28
R3HDM1-215ENST00000483021 IL17RBQ9NRM6 502 aa23.06■■□□□ 1.28
R3HDM1-215ENST00000483021 HOMER2Q9NSB8 354 aa23.06■■□□□ 1.28
R3HDM1-215ENST00000483021 TACC3Q9Y6A5 838 aa23.06■■□□□ 1.28
R3HDM1-215ENST00000483021 ZMYM6O95789 1325 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms