RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 MYCLP12524 364 aaPredicted RBP12.63□□□□□ -0.39
SMPD4-218ENST00000482171 TERF2Q15554 542 aa12.63□□□□□ -0.39
SMPD4-218ENST00000482171 HERC4Q5GLZ8 1057 aaPredicted RBP12.63□□□□□ -0.39
SMPD4-218ENST00000482171 ENAHQ8N8S7 591 aaPredicted RBP12.63□□□□□ -0.39
SMPD4-218ENST00000482171 PIGSQ96S52 555 aa12.63□□□□□ -0.39
SMPD4-218ENST00000482171 CSRNP1Q96S65 589 aa12.63□□□□□ -0.39
SMPD4-218ENST00000482171 PSTPIP2Q9H939 334 aa12.63□□□□□ -0.39
SMPD4-218ENST00000482171 FAM170AA1A519 330 aa12.63□□□□□ -0.39
SMPD4-218ENST00000482171 ZSCAN20P17040 1043 aaPredicted RBP12.63□□□□□ -0.39
SMPD4-218ENST00000482171 CDK8P49336 464 aa12.63□□□□□ -0.39
SMPD4-218ENST00000482171 GPSM2P81274 684 aa12.63□□□□□ -0.39
SMPD4-218ENST00000482171 STXBP4Q6ZWJ1 553 aa12.63□□□□□ -0.39
SMPD4-218ENST00000482171 TDRD7Q8NHU6 1098 aaKnown RBP12.63□□□□□ -0.39
SMPD4-218ENST00000482171 LY9Q9HBG7 655 aa12.63□□□□□ -0.39
SMPD4-218ENST00000482171 BICDL2A1A5D9 508 aa12.63□□□□□ -0.39
SMPD4-218ENST00000482171 TMEM232C9JQI7 657 aa12.63□□□□□ -0.39
SMPD4-218ENST00000482171 ZBTB22O15209 634 aa12.63□□□□□ -0.39
SMPD4-218ENST00000482171 SEC31AO94979 1220 aaKnown RBP12.63□□□□□ -0.39
SMPD4-218ENST00000482171 LONRF3Q496Y0 759 aa12.63□□□□□ -0.39
SMPD4-218ENST00000482171 DCAF17Q5H9S7 520 aaPredicted RBP12.63□□□□□ -0.39
SMPD4-218ENST00000482171 PPP4R3AQ6IN85 833 aa12.63□□□□□ -0.39
SMPD4-218ENST00000482171 STAG1Q8WVM7 1258 aa12.63□□□□□ -0.39
SMPD4-218ENST00000482171 SENP2Q9HC62 589 aa12.63□□□□□ -0.39
SMPD4-218ENST00000482171 ERLIN2O94905 339 aa12.62□□□□□ -0.39
SMPD4-218ENST00000482171 NOC4LQ9BVI4 516 aaKnown RBP12.62□□□□□ -0.39
SMPD4-218ENST00000482171 MYO6Q9UM54 1294 aa12.62□□□□□ -0.39
SMPD4-218ENST00000482171 PCDHA1Q9Y5I3 950 aa12.62□□□□□ -0.39
SMPD4-218ENST00000482171 A0A1W2PQ27 194 aa12.62□□□□□ -0.39
SMPD4-218ENST00000482171 A0A1W2PQ64 194 aa12.62□□□□□ -0.39
SMPD4-218ENST00000482171 A0A1W2PQD8 194 aa12.62□□□□□ -0.39
SMPD4-218ENST00000482171 ZEB2O60315 1214 aa12.62□□□□□ -0.39
SMPD4-218ENST00000482171 PCP11498 1178 aaKnown RBP12.62□□□□□ -0.39
SMPD4-218ENST00000482171 KLRK1P26718 216 aa12.62□□□□□ -0.39
SMPD4-218ENST00000482171 ADKP55263 362 aaKnown RBP12.62□□□□□ -0.39
SMPD4-218ENST00000482171 OXER1Q8TDS5 423 aa12.62□□□□□ -0.39
SMPD4-218ENST00000482171 FOXP1Q9H334 677 aaPredicted RBP12.62□□□□□ -0.39
SMPD4-218ENST00000482171 ZNF408Q9H9D4 720 aa12.62□□□□□ -0.39
SMPD4-218ENST00000482171 AKR1B15C9JRZ8 316 aaPredicted RBP12.62□□□□□ -0.39
SMPD4-218ENST00000482171 BACH1O14867 736 aa12.62□□□□□ -0.39
SMPD4-218ENST00000482171 CETN1Q12798 172 aa12.62□□□□□ -0.39
SMPD4-218ENST00000482171 PRPF4BQ13523 1007 aaKnown RBP12.62□□□□□ -0.39
SMPD4-218ENST00000482171 MICALCLQ6ZW33 695 aa12.62□□□□□ -0.39
SMPD4-218ENST00000482171 NEK8Q86SG6 692 aa12.62□□□□□ -0.39
SMPD4-218ENST00000482171 TICAM2Q86XR7 235 aa12.62□□□□□ -0.39
SMPD4-218ENST00000482171 NELFBQ8WX92 580 aa12.62□□□□□ -0.39
SMPD4-218ENST00000482171 ATRIPQ8WXE1 791 aa12.62□□□□□ -0.39
SMPD4-218ENST00000482171 EPSTI1Q96J88 318 aa12.62□□□□□ -0.39
SMPD4-218ENST00000482171 CCDC42Q96M95 316 aa12.62□□□□□ -0.39
SMPD4-218ENST00000482171 SH2D4AQ9H788 454 aa12.62□□□□□ -0.39
SMPD4-218ENST00000482171 DDX41Q9UJV9 622 aaKnown RBP12.62□□□□□ -0.39
SMPD4-218ENST00000482171 CYLC1P35663 651 aaPredicted RBP12.62□□□□□ -0.39
SMPD4-218ENST00000482171 EXOSC10Q01780 885 aaKnown RBP12.62□□□□□ -0.39
SMPD4-218ENST00000482171 ABCB5Q2M3G0 1257 aa12.62□□□□□ -0.39
SMPD4-218ENST00000482171 PRR16Q569H4 304 aa12.62□□□□□ -0.39
SMPD4-218ENST00000482171 PRR5LQ6MZQ0 368 aa12.62□□□□□ -0.39
SMPD4-218ENST00000482171 MAATS1Q7Z4T9 603 aa12.62□□□□□ -0.39
SMPD4-218ENST00000482171 CCDC65Q8IXS2 484 aa12.62□□□□□ -0.39
SMPD4-218ENST00000482171 BRIP1Q9BX63 1249 aa12.62□□□□□ -0.39
SMPD4-218ENST00000482171 MACROD2A1Z1Q3 448 aa12.61□□□□□ -0.39
SMPD4-218ENST00000482171 ARHGAP6O43182 974 aa12.61□□□□□ -0.39
SMPD4-218ENST00000482171 NPR1P16066 1061 aa12.61□□□□□ -0.39
SMPD4-218ENST00000482171 CERKQ8TCT0 537 aa12.61□□□□□ -0.39
SMPD4-218ENST00000482171 GOLGA6L7A0A1B0GV03 622 aa12.61□□□□□ -0.39
SMPD4-218ENST00000482171 TSGA10IPQ3SY00 556 aa12.61□□□□□ -0.39
SMPD4-218ENST00000482171 MIGA2Q7L4E1 593 aa12.61□□□□□ -0.39
SMPD4-218ENST00000482171 HS2ST1Q7LGA3 356 aa12.61□□□□□ -0.39
SMPD4-218ENST00000482171 GDAP1L1Q96MZ0 367 aa12.61□□□□□ -0.39
SMPD4-218ENST00000482171 PICK1Q9NRD5 415 aa12.61□□□□□ -0.39
SMPD4-218ENST00000482171 SPTLC3Q9NUV7 552 aa12.61□□□□□ -0.39
SMPD4-218ENST00000482171 C3P01024 1663 aa12.61□□□□□ -0.39
SMPD4-218ENST00000482171 DCCP43146 1447 aa12.61□□□□□ -0.39
SMPD4-218ENST00000482171 GUCY1A2P33402 732 aa12.61□□□□□ -0.39
SMPD4-218ENST00000482171 UBXN2AP68543 259 aa12.61□□□□□ -0.39
SMPD4-218ENST00000482171 SF3B3Q15393 1217 aaKnown RBP12.61□□□□□ -0.39
SMPD4-218ENST00000482171 DESI2Q9BSY9 194 aa12.61□□□□□ -0.39
SMPD4-218ENST00000482171 CCDC113Q9H0I3 377 aa12.61□□□□□ -0.39
SMPD4-218ENST00000482171 OR52Z1P0C646 297 aa12.6□□□□□ -0.39
SMPD4-218ENST00000482171 SLC4A9Q96Q91 983 aa12.6□□□□□ -0.39
SMPD4-218ENST00000482171 TCHPQ9BT92 498 aa12.6□□□□□ -0.39
SMPD4-218ENST00000482171 KRT9P35527 623 aa12.6□□□□□ -0.39
SMPD4-218ENST00000482171 HNRNPH2P55795 449 aaKnown RBP12.6□□□□□ -0.39
SMPD4-218ENST00000482171 SNAP25P60880 206 aa12.6□□□□□ -0.39
SMPD4-218ENST00000482171 PCDHA12Q9UN75 941 aa12.6□□□□□ -0.39
SMPD4-218ENST00000482171 COL5A2P05997 1499 aaPredicted RBP12.6□□□□□ -0.39
SMPD4-218ENST00000482171 CASP1P29466 404 aa12.6□□□□□ -0.39
SMPD4-218ENST00000482171 CASP7P55210 303 aa12.6□□□□□ -0.39
SMPD4-218ENST00000482171 CYP4A11Q02928 519 aa12.6□□□□□ -0.39
SMPD4-218ENST00000482171 GOLGA8FQ08AF8 430 aa12.6□□□□□ -0.39
SMPD4-218ENST00000482171 GOLGA8DPQ0D2H9 430 aa12.6□□□□□ -0.39
SMPD4-218ENST00000482171 NSUN4Q96CB9 384 aaKnown RBP12.6□□□□□ -0.39
SMPD4-218ENST00000482171 EPB41L4AQ9HCS5 686 aaPredicted RBP12.6□□□□□ -0.39
SMPD4-218ENST00000482171 CNNM4Q6P4Q7 775 aa12.59□□□□□ -0.39
SMPD4-218ENST00000482171 BARGINQ6ZT62 677 aa12.59□□□□□ -0.39
SMPD4-218ENST00000482171 OTUD6BQ8N6M0 293 aa12.59□□□□□ -0.39
SMPD4-218ENST00000482171 COA1Q9GZY4 146 aa12.59□□□□□ -0.39
SMPD4-218ENST00000482171 RFX7Q2KHR2 1363 aa12.59□□□□□ -0.39
SMPD4-218ENST00000482171 BAZ2BQ9UIF8 2168 aaKnown RBP12.59□□□□□ -0.39
SMPD4-218ENST00000482171 HSF2BPO75031 334 aa12.59□□□□□ -0.39
SMPD4-218ENST00000482171 ALAS1P13196 640 aa12.59□□□□□ -0.39
SMPD4-218ENST00000482171 CHRNA5P30532 468 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms