RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 ZNF287Q9HBT7 754 aa10.7□□□□□ -0.7
VCP-206ENST00000480327 DDX20Q9UHI6 824 aaKnown RBP10.7□□□□□ -0.7
VCP-206ENST00000480327 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.7□□□□□ -0.7
VCP-206ENST00000480327 TAF6LQ9Y6J9 622 aa10.7□□□□□ -0.7
VCP-206ENST00000480327 MYH4Q9Y623 1939 aa10.7□□□□□ -0.7
VCP-206ENST00000480327 NEDD4P46934 1319 aa10.69□□□□□ -0.7
VCP-206ENST00000480327 POTEB2H3BUK9 544 aa10.69□□□□□ -0.7
VCP-206ENST00000480327 SLC27A2O14975 620 aa10.69□□□□□ -0.7
VCP-206ENST00000480327 RANBP6O60518 1105 aaKnown RBP10.69□□□□□ -0.7
VCP-206ENST00000480327 COBLO75128 1261 aa10.69□□□□□ -0.7
VCP-206ENST00000480327 REC8O95072 547 aa10.69□□□□□ -0.7
VCP-206ENST00000480327 SEC24BO95487 1268 aa10.69□□□□□ -0.7
VCP-206ENST00000480327 TSPY3P0CV98 308 aa10.69□□□□□ -0.7
VCP-206ENST00000480327 TSPY8P0CW00 308 aa10.69□□□□□ -0.7
VCP-206ENST00000480327 ATN1P54259 1190 aaPredicted RBP10.69□□□□□ -0.7
VCP-206ENST00000480327 CCNA1P78396 465 aa10.69□□□□□ -0.7
VCP-206ENST00000480327 TFAP4Q01664 338 aa10.69□□□□□ -0.7
VCP-206ENST00000480327 ATP2B2Q01814 1243 aa10.69□□□□□ -0.7
VCP-206ENST00000480327 AKNAD1Q5T1N1 836 aa10.69□□□□□ -0.7
VCP-206ENST00000480327 WDR78Q5VTH9 848 aa10.69□□□□□ -0.7
VCP-206ENST00000480327 CREB3L3Q68CJ9 461 aa10.69□□□□□ -0.7
VCP-206ENST00000480327 CCAR1Q8IX12 1150 aaKnown RBP10.69□□□□□ -0.7
VCP-206ENST00000480327 STAG1Q8WVM7 1258 aa10.69□□□□□ -0.7
VCP-206ENST00000480327 SENP6Q9GZR1 1112 aaPredicted RBP10.69□□□□□ -0.7
VCP-206ENST00000480327 STXBP5LQ9Y2K9 1186 aa10.69□□□□□ -0.7
VCP-206ENST00000480327 TSPY2A6NKD2 308 aa10.68□□□□□ -0.7
VCP-206ENST00000480327 ADORA2AP29274 412 aa10.68□□□□□ -0.7
VCP-206ENST00000480327 COG2Q14746 738 aa10.68□□□□□ -0.7
VCP-206ENST00000480327 NECTIN1Q15223 517 aa10.68□□□□□ -0.7
VCP-206ENST00000480327 C8orf34Q49A92 452 aa10.68□□□□□ -0.7
VCP-206ENST00000480327 MFSD14CQ5VZR4 134 aa10.68□□□□□ -0.7
VCP-206ENST00000480327 ANO1Q5XXA6 986 aa10.68□□□□□ -0.7
VCP-206ENST00000480327 TMEM179Q6ZVK1 233 aa10.68□□□□□ -0.7
VCP-206ENST00000480327 LPAR1Q92633 364 aa10.68□□□□□ -0.7
VCP-206ENST00000480327 CCDC17Q96LX7 622 aa10.68□□□□□ -0.7
VCP-206ENST00000480327 GUCD1Q96NT3 240 aa10.68□□□□□ -0.7
VCP-206ENST00000480327 SPATC1LQ9H0A9 340 aa10.68□□□□□ -0.7
VCP-206ENST00000480327 RNF41Q9H4P4 317 aaPredicted RBP10.68□□□□□ -0.7
VCP-206ENST00000480327 B4E1Z4 1266 aa10.67□□□□□ -0.7
VCP-206ENST00000480327 E7EWF7 191 aa10.67□□□□□ -0.7
VCP-206ENST00000480327 DNM1LO00429 736 aa10.67□□□□□ -0.7
VCP-206ENST00000480327 ORC4O43929 436 aa10.67□□□□□ -0.7
VCP-206ENST00000480327 NMT2O60551 498 aa10.67□□□□□ -0.7
VCP-206ENST00000480327 KDM4AO75164 1064 aa10.67□□□□□ -0.7
VCP-206ENST00000480327 FGRP09769 529 aa10.67□□□□□ -0.7
VCP-206ENST00000480327 ERCC3P19447 782 aa10.67□□□□□ -0.7
VCP-206ENST00000480327 CNGA1P29973 690 aa10.67□□□□□ -0.7
VCP-206ENST00000480327 RTP1P59025 263 aa10.67□□□□□ -0.7
VCP-206ENST00000480327 ICA1Q05084 483 aa10.67□□□□□ -0.7
VCP-206ENST00000480327 PRAMEF19Q5SWL8 479 aa10.67□□□□□ -0.7
VCP-206ENST00000480327 GJC2Q5T442 439 aaPredicted RBP10.67□□□□□ -0.7
VCP-206ENST00000480327 OLFML2BQ68BL8 750 aa10.67□□□□□ -0.7
VCP-206ENST00000480327 STOX1Q6ZVD7 989 aa10.67□□□□□ -0.7
VCP-206ENST00000480327 ATG4CQ96DT6 458 aa10.67□□□□□ -0.7
VCP-206ENST00000480327 ZKSCAN3Q9BRR0 538 aa10.67□□□□□ -0.7
VCP-206ENST00000480327 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.67□□□□□ -0.7
VCP-206ENST00000480327 RAD21O60216 631 aa10.66□□□□□ -0.7
VCP-206ENST00000480327 DSG3P32926 999 aa10.66□□□□□ -0.7
VCP-206ENST00000480327 SNX17Q15036 470 aa10.66□□□□□ -0.7
VCP-206ENST00000480327 C9orf50Q5SZB4 431 aa10.66□□□□□ -0.7
VCP-206ENST00000480327 CHST3Q7LGC8 479 aa10.66□□□□□ -0.7
VCP-206ENST00000480327 RASEFQ8IZ41 740 aa10.66□□□□□ -0.7
VCP-206ENST00000480327 SHCBP1Q8NEM2 672 aa10.66□□□□□ -0.7
VCP-206ENST00000480327 NEDD1Q8NHV4 660 aa10.66□□□□□ -0.7
VCP-206ENST00000480327 ESR2Q92731 530 aa10.66□□□□□ -0.7
VCP-206ENST00000480327 CHMP4CQ96CF2 233 aa10.66□□□□□ -0.7
VCP-206ENST00000480327 CEP95Q96GE4 821 aa10.66□□□□□ -0.7
VCP-206ENST00000480327 USP26Q9BXU7 913 aa10.66□□□□□ -0.7
VCP-206ENST00000480327 TANGO6Q9C0B7 1094 aa10.66□□□□□ -0.7
VCP-206ENST00000480327 CWC22Q9HCG8 908 aaKnown RBP10.66□□□□□ -0.7
VCP-206ENST00000480327 CLIP2Q9UDT6 1046 aa10.66□□□□□ -0.7
VCP-206ENST00000480327 TMX2Q9Y320 296 aa10.66□□□□□ -0.7
VCP-206ENST00000480327 IVNS1ABPQ9Y6Y0 642 aa10.66□□□□□ -0.7
VCP-206ENST00000480327 CHD9Q3L8U1 2897 aa10.66□□□□□ -0.7
VCP-206ENST00000480327 REV3LO60673 3130 aa10.65□□□□□ -0.7
VCP-206ENST00000480327 MSCO60682 206 aa10.65□□□□□ -0.7
VCP-206ENST00000480327 EEF2P13639 858 aaKnown RBP10.65□□□□□ -0.7
VCP-206ENST00000480327 HSPA4P34932 840 aa10.65□□□□□ -0.7
VCP-206ENST00000480327 TRDNQ13061 729 aa10.65□□□□□ -0.7
VCP-206ENST00000480327 COL9A3Q14050 684 aaPredicted RBP10.65□□□□□ -0.7
VCP-206ENST00000480327 TMEM132BQ14DG7 1078 aa10.65□□□□□ -0.7
VCP-206ENST00000480327 RNF20Q5VTR2 975 aa10.65□□□□□ -0.7
VCP-206ENST00000480327 FAM109BQ6ICB4 259 aaPredicted RBP10.65□□□□□ -0.7
VCP-206ENST00000480327 SLC39A5Q6ZMH5 540 aa10.65□□□□□ -0.7
VCP-206ENST00000480327 CYB5R4Q7L1T6 521 aa10.65□□□□□ -0.7
VCP-206ENST00000480327 SH3RF1Q7Z6J0 888 aa10.65□□□□□ -0.7
VCP-206ENST00000480327 RALYLQ86SE5 291 aaKnown RBP10.65□□□□□ -0.7
VCP-206ENST00000480327 DPP9Q86TI2 863 aa10.65□□□□□ -0.7
VCP-206ENST00000480327 SPICE1Q8N0Z3 855 aa10.65□□□□□ -0.7
VCP-206ENST00000480327 NCOA7Q8NI08 942 aa10.65□□□□□ -0.7
VCP-206ENST00000480327 MAML3Q96JK9 1138 aa10.65□□□□□ -0.7
VCP-206ENST00000480327 KRT23Q9C075 422 aa10.65□□□□□ -0.7
VCP-206ENST00000480327 CNNM2Q9H8M5 875 aa10.65□□□□□ -0.7
VCP-206ENST00000480327 KANSL2Q9H9L4 492 aa10.65□□□□□ -0.7
VCP-206ENST00000480327 ARHGEF10LQ9HCE6 1279 aa10.65□□□□□ -0.7
VCP-206ENST00000480327 IL17RBQ9NRM6 502 aa10.65□□□□□ -0.7
VCP-206ENST00000480327 FBXO28Q9NVF7 368 aa10.65□□□□□ -0.7
VCP-206ENST00000480327 HOXC10Q9NYD6 342 aa10.65□□□□□ -0.7
VCP-206ENST00000480327 ZSWIM5Q9P217 1185 aa10.65□□□□□ -0.7
VCP-206ENST00000480327 ADAMTS5Q9UNA0 930 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms