RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 FAM86C2PA6NEL3 165 aa6.63□□□□□ -1.35
CDC42BPA-212ENST00000478573 NOTOA8MTQ0 251 aa6.63□□□□□ -1.35
CDC42BPA-212ENST00000478573 KRTAP9-7A8MTY7 169 aa6.63□□□□□ -1.35
CDC42BPA-212ENST00000478573 NRDCO43847 1150 aa6.63□□□□□ -1.35
CDC42BPA-212ENST00000478573 SRSF3P84103 164 aaKnown RBP6.63□□□□□ -1.35
CDC42BPA-212ENST00000478573 BBS9Q3SYG4 887 aa6.63□□□□□ -1.35
CDC42BPA-212ENST00000478573 CDCP2Q5VXM1 449 aa6.63□□□□□ -1.35
CDC42BPA-212ENST00000478573 BCL11AQ9H165 835 aa6.63□□□□□ -1.35
CDC42BPA-212ENST00000478573 ANTXR1Q9H6X2 564 aa6.63□□□□□ -1.35
CDC42BPA-212ENST00000478573 CNNM2Q9H8M5 875 aa6.63□□□□□ -1.35
CDC42BPA-212ENST00000478573 FBXL21Q9UKT6 434 aa6.63□□□□□ -1.35
CDC42BPA-212ENST00000478573 KCTD3Q9Y597 815 aa6.63□□□□□ -1.35
CDC42BPA-212ENST00000478573 RFXAPO00287 272 aa6.62□□□□□ -1.35
CDC42BPA-212ENST00000478573 SIGLEC6O43699 453 aa6.62□□□□□ -1.35
CDC42BPA-212ENST00000478573 KIR2DL1P43626 348 aaPredicted RBP6.62□□□□□ -1.35
CDC42BPA-212ENST00000478573 KIR2DL2P43627 348 aaPredicted RBP6.62□□□□□ -1.35
CDC42BPA-212ENST00000478573 RTP1P59025 263 aa6.62□□□□□ -1.35
CDC42BPA-212ENST00000478573 LINC00116Q8NCU8 138 aa6.62□□□□□ -1.35
CDC42BPA-212ENST00000478573 SLC6A18Q96N87 628 aa6.62□□□□□ -1.35
CDC42BPA-212ENST00000478573 EHMT1Q9H9B1 1298 aa6.62□□□□□ -1.35
CDC42BPA-212ENST00000478573 GCM1Q9NP62 436 aa6.62□□□□□ -1.35
CDC42BPA-212ENST00000478573 CHST7Q9NS84 486 aa6.62□□□□□ -1.35
CDC42BPA-212ENST00000478573 SIRT5Q9NXA8 310 aa6.62□□□□□ -1.35
CDC42BPA-212ENST00000478573 GFOD1Q9NXC2 390 aa6.62□□□□□ -1.35
CDC42BPA-212ENST00000478573 CCDC180Q9P1Z9 1646 aa6.61□□□□□ -1.35
CDC42BPA-212ENST00000478573 ADAMTS20P59510 1910 aa6.61□□□□□ -1.35
CDC42BPA-212ENST00000478573 BMP7P18075 431 aa6.61□□□□□ -1.35
CDC42BPA-212ENST00000478573 ZNF165P49910 485 aa6.61□□□□□ -1.35
CDC42BPA-212ENST00000478573 CTSWP56202 376 aa6.61□□□□□ -1.35
CDC42BPA-212ENST00000478573 SSPNQ14714 243 aa6.61□□□□□ -1.35
CDC42BPA-212ENST00000478573 ZNF385BQ569K4 471 aa6.61□□□□□ -1.35
CDC42BPA-212ENST00000478573 NKD1Q969G9 470 aa6.61□□□□□ -1.35
CDC42BPA-212ENST00000478573 PLCD4Q9BRC7 762 aa6.61□□□□□ -1.35
CDC42BPA-212ENST00000478573 CDADC1Q9BWV3 514 aa6.61□□□□□ -1.35
CDC42BPA-212ENST00000478573 GPR55Q9Y2T6 319 aaPredicted RBP6.61□□□□□ -1.35
CDC42BPA-212ENST00000478573 PCDHB12Q9Y5F1 795 aa6.61□□□□□ -1.35
CDC42BPA-212ENST00000478573 B8ZZF3 427 aa6.6□□□□□ -1.35
CDC42BPA-212ENST00000478573 NME1P15531 152 aaKnown RBP6.6□□□□□ -1.35
CDC42BPA-212ENST00000478573 PI3P19957 117 aa6.6□□□□□ -1.35
CDC42BPA-212ENST00000478573 CCNFP41002 786 aa6.6□□□□□ -1.35
CDC42BPA-212ENST00000478573 MRPL58Q14197 206 aaKnown RBP6.6□□□□□ -1.35
CDC42BPA-212ENST00000478573 KIR3DS1Q14943 382 aa6.6□□□□□ -1.35
CDC42BPA-212ENST00000478573 TCERG1LQ5VWI1 586 aa6.6□□□□□ -1.35
CDC42BPA-212ENST00000478573 TMEM192Q8IY95 271 aa6.6□□□□□ -1.35
CDC42BPA-212ENST00000478573 REXO1Q8N1G1 1221 aaKnown RBP6.6□□□□□ -1.35
CDC42BPA-212ENST00000478573 FCRL2Q96LA5 508 aaPredicted RBP6.6□□□□□ -1.35
CDC42BPA-212ENST00000478573 ZCCHC4Q9H5U6 513 aa6.6□□□□□ -1.35
CDC42BPA-212ENST00000478573 CRTAC1Q9NQ79 661 aa6.6□□□□□ -1.35
CDC42BPA-212ENST00000478573 TAF6LQ9Y6J9 622 aa6.6□□□□□ -1.35
CDC42BPA-212ENST00000478573 VIPR1P32241 457 aa6.59□□□□□ -1.35
CDC42BPA-212ENST00000478573 LRRFIP1Q32MZ4 808 aaKnown RBP6.59□□□□□ -1.35
CDC42BPA-212ENST00000478573 DSCC1Q9BVC3 393 aa6.59□□□□□ -1.35
CDC42BPA-212ENST00000478573 MBD1Q9UIS9 605 aaPredicted RBP6.59□□□□□ -1.35
CDC42BPA-212ENST00000478573 IRAK3Q9Y616 596 aa6.59□□□□□ -1.35
CDC42BPA-212ENST00000478573 PRRG2O14669 202 aa6.58□□□□□ -1.36
CDC42BPA-212ENST00000478573 RECKO95980 971 aa6.58□□□□□ -1.36
CDC42BPA-212ENST00000478573 PNLIPP16233 465 aa6.58□□□□□ -1.36
CDC42BPA-212ENST00000478573 HOXA5P20719 270 aa6.58□□□□□ -1.36
CDC42BPA-212ENST00000478573 EPHB3P54753 998 aa6.58□□□□□ -1.36
CDC42BPA-212ENST00000478573 HSF5Q4G112 596 aaPredicted RBP6.58□□□□□ -1.36
CDC42BPA-212ENST00000478573 OLFML2BQ68BL8 750 aa6.58□□□□□ -1.36
CDC42BPA-212ENST00000478573 GALNT18Q6P9A2 607 aa6.58□□□□□ -1.36
CDC42BPA-212ENST00000478573 CRTC3Q6UUV7 619 aa6.58□□□□□ -1.36
CDC42BPA-212ENST00000478573 KIAA0825Q8IV33 1275 aa6.58□□□□□ -1.36
CDC42BPA-212ENST00000478573 TMEM87AQ8NBN3 555 aa6.58□□□□□ -1.36
CDC42BPA-212ENST00000478573 SIGLEC10Q96LC7 697 aa6.58□□□□□ -1.36
CDC42BPA-212ENST00000478573 SLC9A7Q96T83 725 aa6.58□□□□□ -1.36
CDC42BPA-212ENST00000478573 PARD6AQ9NPB6 346 aa6.58□□□□□ -1.36
CDC42BPA-212ENST00000478573 TNFRSF10DQ9UBN6 386 aa6.58□□□□□ -1.36
CDC42BPA-212ENST00000478573 RAPGEFL1Q9UHV5 662 aa6.58□□□□□ -1.36
CDC42BPA-212ENST00000478573 NCANO14594 1321 aa6.57□□□□□ -1.36
CDC42BPA-212ENST00000478573 FADS2P1A8MWK0 482 aa6.57□□□□□ -1.36
CDC42BPA-212ENST00000478573 ARL4AP40617 200 aa6.57□□□□□ -1.36
CDC42BPA-212ENST00000478573 CTSKP43235 329 aa6.57□□□□□ -1.36
CDC42BPA-212ENST00000478573 AUHQ13825 339 aaKnown RBP6.57□□□□□ -1.36
CDC42BPA-212ENST00000478573 NUP43Q8NFH3 380 aa6.57□□□□□ -1.36
CDC42BPA-212ENST00000478573 PANK1Q8TE04 598 aa6.57□□□□□ -1.36
CDC42BPA-212ENST00000478573 SPON2Q9BUD6 331 aa6.57□□□□□ -1.36
CDC42BPA-212ENST00000478573 AP5S1Q9NUS5 200 aa6.57□□□□□ -1.36
CDC42BPA-212ENST00000478573 ERVK13-1Q9NX77 482 aa6.57□□□□□ -1.36
CDC42BPA-212ENST00000478573 WTIPA6NIX2 430 aaPredicted RBP6.56□□□□□ -1.36
CDC42BPA-212ENST00000478573 MEIS3P2A8K0S8 358 aa6.56□□□□□ -1.36
CDC42BPA-212ENST00000478573 NUDT19A8MXV4 375 aa6.56□□□□□ -1.36
CDC42BPA-212ENST00000478573 TNFRSF10CO14798 259 aa6.56□□□□□ -1.36
CDC42BPA-212ENST00000478573 MPOP05164 745 aa6.56□□□□□ -1.36
CDC42BPA-212ENST00000478573 TCF3P15923 654 aa6.56□□□□□ -1.36
CDC42BPA-212ENST00000478573 PRKCAP17252 672 aa6.56□□□□□ -1.36
CDC42BPA-212ENST00000478573 ENDOUP21128 410 aaKnown RBP6.56□□□□□ -1.36
CDC42BPA-212ENST00000478573 BMP8BP34820 402 aa6.56□□□□□ -1.36
CDC42BPA-212ENST00000478573 TDRD10Q5VZ19 366 aaKnown RBP6.56□□□□□ -1.36
CDC42BPA-212ENST00000478573 SLITRK4Q8IW52 837 aa6.56□□□□□ -1.36
CDC42BPA-212ENST00000478573 TMEM151BQ8IW70 566 aa6.56□□□□□ -1.36
CDC42BPA-212ENST00000478573 CCDC144CPQ8IYA2 1237 aa6.56□□□□□ -1.36
CDC42BPA-212ENST00000478573 EAF1Q96JC9 268 aaPredicted RBP6.56□□□□□ -1.36
CDC42BPA-212ENST00000478573 NT5C1AQ9BXI3 368 aa6.56□□□□□ -1.36
CDC42BPA-212ENST00000478573 CNTD2Q9H8S5 307 aa6.56□□□□□ -1.36
CDC42BPA-212ENST00000478573 ZNF205O95201 554 aa6.55□□□□□ -1.36
CDC42BPA-212ENST00000478573 BUD31P41223 144 aaPredicted RBP6.55□□□□□ -1.36
CDC42BPA-212ENST00000478573 RAB3GAP1Q15042 981 aa6.55□□□□□ -1.36
CDC42BPA-212ENST00000478573 FBXW10Q5XX13 1052 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms