RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 RNF20Q5VTR2 975 aa12.06□□□□□ -0.48
HDAC6-222ENST00000478095 DGKHQ86XP1 1220 aa12.06□□□□□ -0.48
HDAC6-222ENST00000478095 TTC14Q96N46 770 aa12.06□□□□□ -0.48
HDAC6-222ENST00000478095 METRNQ9UJH8 293 aa12.06□□□□□ -0.48
HDAC6-222ENST00000478095 GTF3C3Q9Y5Q9 886 aa12.06□□□□□ -0.48
HDAC6-222ENST00000478095 LAMA4Q16363 1823 aa12.06□□□□□ -0.48
HDAC6-222ENST00000478095 CASP8AP2Q9UKL3 1982 aa12.05□□□□□ -0.48
HDAC6-222ENST00000478095 VWA5AO00534 786 aa12.05□□□□□ -0.48
HDAC6-222ENST00000478095 PRC1O43663 620 aa12.05□□□□□ -0.48
HDAC6-222ENST00000478095 PDHBP11177 359 aa12.05□□□□□ -0.48
HDAC6-222ENST00000478095 PSEN1P49768 467 aa12.05□□□□□ -0.48
HDAC6-222ENST00000478095 PRKCZQ05513 592 aa12.05□□□□□ -0.48
HDAC6-222ENST00000478095 PDAP1Q13442 181 aaKnown RBP12.05□□□□□ -0.48
HDAC6-222ENST00000478095 TMEM132BQ14DG7 1078 aa12.05□□□□□ -0.48
HDAC6-222ENST00000478095 SEC23AQ15436 765 aa12.05□□□□□ -0.48
HDAC6-222ENST00000478095 CCDC178Q5BJE1 867 aa12.05□□□□□ -0.48
HDAC6-222ENST00000478095 LHX8Q68G74 356 aa12.05□□□□□ -0.48
HDAC6-222ENST00000478095 TTBK2Q6IQ55 1244 aa12.05□□□□□ -0.48
HDAC6-222ENST00000478095 CCAR1Q8IX12 1150 aaKnown RBP12.05□□□□□ -0.48
HDAC6-222ENST00000478095 PNMA1Q8ND90 353 aa12.05□□□□□ -0.48
HDAC6-222ENST00000478095 DCAF4Q8WV16 495 aa12.05□□□□□ -0.48
HDAC6-222ENST00000478095 SENP2Q9HC62 589 aa12.05□□□□□ -0.48
HDAC6-222ENST00000478095 CWC22Q9HCG8 908 aaKnown RBP12.05□□□□□ -0.48
HDAC6-222ENST00000478095 GPCPD1Q9NPB8 672 aa12.05□□□□□ -0.48
HDAC6-222ENST00000478095 GPHNQ9NQX3 736 aaPredicted RBP12.05□□□□□ -0.48
HDAC6-222ENST00000478095 FEM1BQ9UK73 627 aa12.05□□□□□ -0.48
HDAC6-222ENST00000478095 GABRQQ9UN88 632 aa12.05□□□□□ -0.48
HDAC6-222ENST00000478095 PTPN22Q9Y2R2 807 aa12.05□□□□□ -0.48
HDAC6-222ENST00000478095 PTCH2Q9Y6C5 1203 aa12.05□□□□□ -0.48
HDAC6-222ENST00000478095 MYPNQ86TC9 1320 aa12.05□□□□□ -0.48
HDAC6-222ENST00000478095 ERICH2A1L162 156 aa12.04□□□□□ -0.48
HDAC6-222ENST00000478095 GOLGA8HP0CJ92 632 aa12.04□□□□□ -0.48
HDAC6-222ENST00000478095 ZKSCAN1P17029 563 aaPredicted RBP12.04□□□□□ -0.48
HDAC6-222ENST00000478095 HSPA4P34932 840 aa12.04□□□□□ -0.48
HDAC6-222ENST00000478095 SLC16A2P36021 539 aa12.04□□□□□ -0.48
HDAC6-222ENST00000478095 SLC4A3P48751 1232 aa12.04□□□□□ -0.48
HDAC6-222ENST00000478095 STAT2P52630 851 aa12.04□□□□□ -0.48
HDAC6-222ENST00000478095 SNAP25P60880 206 aa12.04□□□□□ -0.48
HDAC6-222ENST00000478095 CCNA1P78396 465 aa12.04□□□□□ -0.48
HDAC6-222ENST00000478095 WTAPQ15007 396 aa12.04□□□□□ -0.48
HDAC6-222ENST00000478095 PKN2Q16513 984 aaKnown RBP12.04□□□□□ -0.48
HDAC6-222ENST00000478095 ADCK5Q3MIX3 580 aa12.04□□□□□ -0.48
HDAC6-222ENST00000478095 TMEM67Q5HYA8 995 aa12.04□□□□□ -0.48
HDAC6-222ENST00000478095 FBXO46Q6PJ61 603 aaPredicted RBP12.04□□□□□ -0.48
HDAC6-222ENST00000478095 MB21D1Q8N884 522 aa12.04□□□□□ -0.48
HDAC6-222ENST00000478095 PRPF38AQ8NAV1 312 aaKnown RBP12.04□□□□□ -0.48
HDAC6-222ENST00000478095 COA7Q96BR5 231 aa12.04□□□□□ -0.48
HDAC6-222ENST00000478095 MOV10L1Q9BXT6 1211 aaKnown RBP12.04□□□□□ -0.48
HDAC6-222ENST00000478095 LRRC2Q9BYS8 371 aa12.04□□□□□ -0.48
HDAC6-222ENST00000478095 SPATC1LQ9H0A9 340 aa12.04□□□□□ -0.48
HDAC6-222ENST00000478095 SRRDQ9UH36 339 aa12.04□□□□□ -0.48
HDAC6-222ENST00000478095 ADAMTS5Q9UNA0 930 aa12.04□□□□□ -0.48
HDAC6-222ENST00000478095 HPS5Q9UPZ3 1129 aa12.04□□□□□ -0.48
HDAC6-222ENST00000478095 ZSWIM8A7E2V4 1837 aa12.03□□□□□ -0.48
HDAC6-222ENST00000478095 GNRH1P01148 92 aa12.03□□□□□ -0.48
HDAC6-222ENST00000478095 HOXD10P28358 340 aa12.03□□□□□ -0.48
HDAC6-222ENST00000478095 MAPK4P31152 587 aa12.03□□□□□ -0.48
HDAC6-222ENST00000478095 MCM5P33992 734 aa12.03□□□□□ -0.48
HDAC6-222ENST00000478095 FLT3LGP49771 235 aa12.03□□□□□ -0.48
HDAC6-222ENST00000478095 ZNF543Q08ER8 600 aa12.03□□□□□ -0.48
HDAC6-222ENST00000478095 SART3Q15020 963 aaKnown RBP12.03□□□□□ -0.48
HDAC6-222ENST00000478095 GPR142Q7Z601 462 aa12.03□□□□□ -0.48
HDAC6-222ENST00000478095 FAM160B2Q86V87 743 aa12.03□□□□□ -0.48
HDAC6-222ENST00000478095 NCAPG2Q86XI2 1143 aa12.03□□□□□ -0.48
HDAC6-222ENST00000478095 CPXCR1Q8N123 301 aa12.03□□□□□ -0.48
HDAC6-222ENST00000478095 REPS2Q8NFH8 660 aa12.03□□□□□ -0.48
HDAC6-222ENST00000478095 RAET1EQ8TD07 263 aa12.03□□□□□ -0.48
HDAC6-222ENST00000478095 ANKS1AQ92625 1134 aa12.03□□□□□ -0.48
HDAC6-222ENST00000478095 ABHD8Q96I13 439 aa12.03□□□□□ -0.48
HDAC6-222ENST00000478095 TCEANC2Q96MN5 208 aa12.03□□□□□ -0.48
HDAC6-222ENST00000478095 NEK1Q96PY6 1258 aa12.03□□□□□ -0.48
HDAC6-222ENST00000478095 CPVLQ9H3G5 476 aa12.03□□□□□ -0.48
HDAC6-222ENST00000478095 RAVER2Q9HCJ3 691 aaKnown RBP12.03□□□□□ -0.48
HDAC6-222ENST00000478095 ZNF214Q9UL59 606 aaPredicted RBP12.03□□□□□ -0.48
HDAC6-222ENST00000478095 CTDP1Q9Y5B0 961 aaPredicted RBP12.03□□□□□ -0.48
HDAC6-222ENST00000478095 SNX14Q9Y5W7 946 aa12.03□□□□□ -0.48
HDAC6-222ENST00000478095 SH2B2O14492 632 aaPredicted RBP12.02□□□□□ -0.49
HDAC6-222ENST00000478095 ZBED4O75132 1171 aa12.02□□□□□ -0.49
HDAC6-222ENST00000478095 SNHG28P0DPA3 235 aa12.02□□□□□ -0.49
HDAC6-222ENST00000478095 CPA1P15085 419 aa12.02□□□□□ -0.49
HDAC6-222ENST00000478095 TAL1P17542 331 aaPredicted RBP12.02□□□□□ -0.49
HDAC6-222ENST00000478095 ERCC3P19447 782 aa12.02□□□□□ -0.49
HDAC6-222ENST00000478095 CCDC174Q6PII3 467 aa12.02□□□□□ -0.49
HDAC6-222ENST00000478095 PLEKHH3Q7Z736 793 aa12.02□□□□□ -0.49
HDAC6-222ENST00000478095 IGDCC4Q8TDY8 1250 aa12.02□□□□□ -0.49
HDAC6-222ENST00000478095 SH3TC2Q8TF17 1288 aa12.02□□□□□ -0.49
HDAC6-222ENST00000478095 CHURC1Q8WUH1 139 aa12.02□□□□□ -0.49
HDAC6-222ENST00000478095 JAKMIP1Q96N16 626 aaKnown RBP12.02□□□□□ -0.49
HDAC6-222ENST00000478095 USP26Q9BXU7 913 aa12.02□□□□□ -0.49
HDAC6-222ENST00000478095 UBA5Q9GZZ9 404 aa12.02□□□□□ -0.49
HDAC6-222ENST00000478095 SLC38A10Q9HBR0 1119 aa12.02□□□□□ -0.49
HDAC6-222ENST00000478095 PRR12Q9ULL5 1215 aa12.02□□□□□ -0.49
HDAC6-222ENST00000478095 RIOK3O14730 519 aaKnown RBP12.01□□□□□ -0.49
HDAC6-222ENST00000478095 SEC24BO95487 1268 aa12.01□□□□□ -0.49
HDAC6-222ENST00000478095 MYCP01106 439 aaPredicted RBP12.01□□□□□ -0.49
HDAC6-222ENST00000478095 CYP2B6P20813 491 aa12.01□□□□□ -0.49
HDAC6-222ENST00000478095 STAT3P40763 770 aa12.01□□□□□ -0.49
HDAC6-222ENST00000478095 PRMT2P55345 433 aa12.01□□□□□ -0.49
HDAC6-222ENST00000478095 KRT32Q14532 448 aa12.01□□□□□ -0.49
HDAC6-222ENST00000478095 TSGA10IPQ3SY00 556 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms