RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 PGRP06401 933 aa3.44□□□□□ -1.86
HMGN4-202ENST00000477243 PF4V1P10720 104 aa3.44□□□□□ -1.86
HMGN4-202ENST00000477243 NAT2P11245 290 aa3.44□□□□□ -1.86
HMGN4-202ENST00000477243 RRM1P23921 792 aa3.44□□□□□ -1.86
HMGN4-202ENST00000477243 IDH3AP50213 366 aa3.44□□□□□ -1.86
HMGN4-202ENST00000477243 SCNN1BP51168 640 aa3.44□□□□□ -1.86
HMGN4-202ENST00000477243 GTF2A2P52657 109 aa3.44□□□□□ -1.86
HMGN4-202ENST00000477243 TMPRSS15P98073 1019 aa3.44□□□□□ -1.86
HMGN4-202ENST00000477243 CLCQ05315 142 aa3.44□□□□□ -1.86
HMGN4-202ENST00000477243 SART3Q15020 963 aaKnown RBP3.44□□□□□ -1.86
HMGN4-202ENST00000477243 INTS3Q68E01 1043 aaKnown RBP3.44□□□□□ -1.86
HMGN4-202ENST00000477243 MRM1Q6IN84 353 aaKnown RBP3.44□□□□□ -1.86
HMGN4-202ENST00000477243 LVRNQ6Q4G3 990 aa3.44□□□□□ -1.86
HMGN4-202ENST00000477243 VHLLQ6RSH7 139 aa3.44□□□□□ -1.86
HMGN4-202ENST00000477243 BNC2Q6ZN30 1099 aaPredicted RBP3.44□□□□□ -1.86
HMGN4-202ENST00000477243 UBE2R2Q712K3 238 aaPredicted RBP3.44□□□□□ -1.86
HMGN4-202ENST00000477243 PODNQ7Z5L7 613 aa3.44□□□□□ -1.86
HMGN4-202ENST00000477243 CPA6Q8N4T0 437 aa3.44□□□□□ -1.86
HMGN4-202ENST00000477243 TAB3Q8N5C8 712 aaPredicted RBP3.44□□□□□ -1.86
HMGN4-202ENST00000477243 C1orf127Q8N9H9 656 aa3.44□□□□□ -1.86
HMGN4-202ENST00000477243 GIMAP8Q8ND71 665 aaPredicted RBP3.44□□□□□ -1.86
HMGN4-202ENST00000477243 OR2W6PQ8NHA6 318 aa3.44□□□□□ -1.86
HMGN4-202ENST00000477243 ZDHHC1Q8WTX9 485 aa3.44□□□□□ -1.86
HMGN4-202ENST00000477243 RPGRQ92834 1020 aaKnown RBP3.44□□□□□ -1.86
HMGN4-202ENST00000477243 PPM1MQ96MI6 270 aa3.44□□□□□ -1.86
HMGN4-202ENST00000477243 NECAB3Q96P71 396 aaPredicted RBP3.44□□□□□ -1.86
HMGN4-202ENST00000477243 SERINC2Q96SA4 455 aa3.44□□□□□ -1.86
HMGN4-202ENST00000477243 TSPAN18Q96SJ8 248 aa3.44□□□□□ -1.86
HMGN4-202ENST00000477243 ALDH8A1Q9H2A2 487 aaPredicted RBP3.44□□□□□ -1.86
HMGN4-202ENST00000477243 KIAA1586Q9HCI6 787 aa3.44□□□□□ -1.86
HMGN4-202ENST00000477243 SH2B1Q9NRF2 756 aaPredicted RBP3.44□□□□□ -1.86
HMGN4-202ENST00000477243 C1orf112Q9NSG2 853 aa3.44□□□□□ -1.86
HMGN4-202ENST00000477243 TRMT13Q9NUP7 481 aaKnown RBP3.44□□□□□ -1.86
HMGN4-202ENST00000477243 ACAD8Q9UKU7 415 aa3.44□□□□□ -1.86
HMGN4-202ENST00000477243 CYP8B1Q9UNU6 501 aa3.44□□□□□ -1.86
HMGN4-202ENST00000477243 APOBEC2Q9Y235 224 aaKnown RBP3.44□□□□□ -1.86
HMGN4-202ENST00000477243 FAM50BQ9Y247 325 aa3.44□□□□□ -1.86
HMGN4-202ENST00000477243 BCS1LQ9Y276 419 aa3.44□□□□□ -1.86
HMGN4-202ENST00000477243 CD109Q6YHK3 1445 aa3.44□□□□□ -1.86
HMGN4-202ENST00000477243 FGD6Q6ZV73 1430 aa3.44□□□□□ -1.86
HMGN4-202ENST00000477243 B2RBV5 119 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 B4E1Z4 1266 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 J3KRW8 73 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 K7ESF4 209 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 PMM2O15305 246 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 SUSD5O60279 629 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 SNX2O60749 519 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 EFCAB14O75071 495 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 FBXO24O75426 580 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 CFBP00751 764 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 IL2RAP01589 272 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 LTFP02788 710 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 FAM200BP0CF97 657 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 ZKSCAN1P17029 563 aaPredicted RBP3.43□□□□□ -1.86
HMGN4-202ENST00000477243 SDSP20132 328 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 TNFAIP3P21580 790 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 RXRGP48443 463 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 VEGFBP49765 207 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 ZNF143P52747 638 aaPredicted RBP3.43□□□□□ -1.86
HMGN4-202ENST00000477243 SUMO1P63165 101 aaKnown RBP3.43□□□□□ -1.86
HMGN4-202ENST00000477243 KRT85P78386 507 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 GPSM2P81274 684 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 RBM10P98175 930 aaKnown RBP3.43□□□□□ -1.86
HMGN4-202ENST00000477243 GRB10Q13322 594 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 LRRC14Q15048 493 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 TOMM20Q15388 145 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 SLC10A6Q3KNW5 377 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 CCDC184Q52MB2 194 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 RPS26P11Q5JNZ5 115 aaPredicted RBP3.43□□□□□ -1.86
HMGN4-202ENST00000477243 FAM209AQ5JX71 171 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 TMEM240Q5SV17 173 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 SH3PXD2AQ5TCZ1 1133 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 SCARA3Q6AZY7 606 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 IQSEC1Q6DN90 963 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 LHFPL2Q6ZUX7 228 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 SRGAP1Q7Z6B7 1085 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 CATIPQ7Z7H3 387 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 NLRP13Q86W25 1043 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 ANKLE2Q86XL3 938 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 KIF18BQ86Y91 864 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 CHCHD4Q8N4Q1 142 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 MRPL50Q8N5N7 158 aaKnown RBP3.43□□□□□ -1.86
HMGN4-202ENST00000477243 FBXO27Q8NI29 283 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 RHPN1Q8TCX5 695 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 PLD4Q96BZ4 506 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 PGBD4Q96DM1 585 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 FUBP3Q96I24 572 aaKnown RBP eCLIP3.43□□□□□ -1.86
HMGN4-202ENST00000477243 PAWRQ96IZ0 340 aaKnown RBP3.43□□□□□ -1.86
HMGN4-202ENST00000477243 DCBLD2Q96PD2 775 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 ISCA1Q9BUE6 129 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 TRIM8Q9BZR9 551 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 LRRC27Q9C0I9 530 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 CHRDQ9H2X0 955 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 UNC45AQ9H3U1 944 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 LIN7BQ9HAP6 207 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 RIC8AQ9NPQ8 531 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 PRDM9Q9NQV7 894 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 TMPRSS4Q9NRS4 437 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 DZANK1Q9NVP4 752 aa3.43□□□□□ -1.86
HMGN4-202ENST00000477243 SUCOQ9UBS9 1254 aaKnown RBP3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms