RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 CYLC1P35663 651 aaPredicted RBP15.38■□□□□ 0.05
HDAC1-206ENST00000476391 PAPOLAP51003 745 aaKnown RBP15.38■□□□□ 0.05
HDAC1-206ENST00000476391 COPB1P53618 953 aaKnown RBP15.38■□□□□ 0.05
HDAC1-206ENST00000476391 ROR2Q01974 943 aaKnown RBP15.38■□□□□ 0.05
HDAC1-206ENST00000476391 PAK2Q13177 524 aa15.38■□□□□ 0.05
HDAC1-206ENST00000476391 MKRN4PQ13434 485 aaPredicted RBP15.38■□□□□ 0.05
HDAC1-206ENST00000476391 STK11IPQ8N1F8 1099 aa15.38■□□□□ 0.05
HDAC1-206ENST00000476391 PIK3R5Q8WYR1 880 aa15.38■□□□□ 0.05
HDAC1-206ENST00000476391 CNKSR1Q969H4 720 aa15.38■□□□□ 0.05
HDAC1-206ENST00000476391 L3MBTL3Q96JM7 780 aaPredicted RBP15.38■□□□□ 0.05
HDAC1-206ENST00000476391 ZNF570Q96NI8 536 aa15.38■□□□□ 0.05
HDAC1-206ENST00000476391 TSGA10Q9BZW7 698 aa15.38■□□□□ 0.05
HDAC1-206ENST00000476391 YIPF3Q9GZM5 350 aa15.38■□□□□ 0.05
HDAC1-206ENST00000476391 POLD4Q9HCU8 107 aa15.38■□□□□ 0.05
HDAC1-206ENST00000476391 SLC12A6Q9UHW9 1150 aa15.38■□□□□ 0.05
HDAC1-206ENST00000476391 CFAP73A6NFT4 308 aa15.37■□□□□ 0.05
HDAC1-206ENST00000476391 GOLGA6L10A6NI86 522 aa15.37■□□□□ 0.05
HDAC1-206ENST00000476391 CDKL5O76039 1030 aa15.37■□□□□ 0.05
HDAC1-206ENST00000476391 PAEPP09466 180 aa15.37■□□□□ 0.05
HDAC1-206ENST00000476391 TCP1P17987 556 aaKnown RBP15.37■□□□□ 0.05
HDAC1-206ENST00000476391 BYSLQ13895 437 aaKnown RBP15.37■□□□□ 0.05
HDAC1-206ENST00000476391 C8orf74Q6P047 294 aa15.37■□□□□ 0.05
HDAC1-206ENST00000476391 EYA1Q99502 592 aa15.37■□□□□ 0.05
HDAC1-206ENST00000476391 SENP2Q9HC62 589 aa15.37■□□□□ 0.05
HDAC1-206ENST00000476391 GPHNQ9NQX3 736 aaPredicted RBP15.37■□□□□ 0.05
HDAC1-206ENST00000476391 GDF3Q9NR23 364 aa15.37■□□□□ 0.05
HDAC1-206ENST00000476391 FBXO2Q9UK22 296 aaPredicted RBP15.37■□□□□ 0.05
HDAC1-206ENST00000476391 MAP3K2Q9Y2U5 619 aa15.37■□□□□ 0.05
HDAC1-206ENST00000476391 H7C1W4 665 aa15.37■□□□□ 0.05
HDAC1-206ENST00000476391 QPCTQ16769 361 aa15.37■□□□□ 0.05
HDAC1-206ENST00000476391 GRAMD1CQ8IYS0 662 aa15.37■□□□□ 0.05
HDAC1-206ENST00000476391 CCDC170Q8IYT3 715 aa15.37■□□□□ 0.05
HDAC1-206ENST00000476391 MOV10L1Q9BXT6 1211 aaKnown RBP15.37■□□□□ 0.05
HDAC1-206ENST00000476391 TMBIM4Q9HC24 238 aa15.37■□□□□ 0.05
HDAC1-206ENST00000476391 SLC5A4Q9NY91 659 aa15.37■□□□□ 0.05
HDAC1-206ENST00000476391 LUC7L2Q9Y383 392 aaKnown RBP15.37■□□□□ 0.05
HDAC1-206ENST00000476391 SLIT1O75093 1534 aa15.37■□□□□ 0.05
HDAC1-206ENST00000476391 FLT4P35916 1363 aa15.37■□□□□ 0.05
HDAC1-206ENST00000476391 BCL9LQ86UU0 1499 aa15.37■□□□□ 0.05
HDAC1-206ENST00000476391 ALADP13716 330 aa15.36■□□□□ 0.05
HDAC1-206ENST00000476391 GCLCP48506 637 aaPredicted RBP15.36■□□□□ 0.05
HDAC1-206ENST00000476391 EIF4A1P60842 406 aaKnown RBP15.36■□□□□ 0.05
HDAC1-206ENST00000476391 TTF1Q15361 905 aaPredicted RBP15.36■□□□□ 0.05
HDAC1-206ENST00000476391 TNNI3KQ59H18 835 aa15.36■□□□□ 0.05
HDAC1-206ENST00000476391 KSR2Q6VAB6 950 aa15.36■□□□□ 0.05
HDAC1-206ENST00000476391 CCDC63Q8NA47 563 aa15.36■□□□□ 0.05
HDAC1-206ENST00000476391 ALS2CR12Q96Q35 445 aa15.36■□□□□ 0.05
HDAC1-206ENST00000476391 GSDMAQ96QA5 445 aa15.36■□□□□ 0.05
HDAC1-206ENST00000476391 SEC31BQ9NQW1 1179 aa15.36■□□□□ 0.05
HDAC1-206ENST00000476391 FPGT-TNNI3KV9GXZ4 949 aa15.36■□□□□ 0.05
HDAC1-206ENST00000476391 PPP1R3GB7ZBB8 358 aa15.36■□□□□ 0.05
HDAC1-206ENST00000476391 LINGO3P0C6S8 592 aa15.36■□□□□ 0.05
HDAC1-206ENST00000476391 PDIA5Q14554 519 aa15.36■□□□□ 0.05
HDAC1-206ENST00000476391 CDC37Q16543 378 aaPredicted RBP15.36■□□□□ 0.05
HDAC1-206ENST00000476391 MEA1Q16626 185 aa15.36■□□□□ 0.05
HDAC1-206ENST00000476391 LRIG3Q6UXM1 1119 aa15.36■□□□□ 0.05
HDAC1-206ENST00000476391 DDX46Q7L014 1031 aaKnown RBP15.36■□□□□ 0.05
HDAC1-206ENST00000476391 APLFQ8IW19 511 aaPredicted RBP15.36■□□□□ 0.05
HDAC1-206ENST00000476391 WHAMMQ8TF30 809 aa15.36■□□□□ 0.05
HDAC1-206ENST00000476391 NUP133Q8WUM0 1156 aa15.36■□□□□ 0.05
HDAC1-206ENST00000476391 ZFAND2BQ8WV99 257 aa15.36■□□□□ 0.05
HDAC1-206ENST00000476391 LACRTQ9GZZ8 138 aa15.36■□□□□ 0.05
HDAC1-206ENST00000476391 PAPOLBQ9NRJ5 636 aaKnown RBP15.36■□□□□ 0.05
HDAC1-206ENST00000476391 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.36■□□□□ 0.05
HDAC1-206ENST00000476391 WDR19Q8NEZ3 1342 aa15.36■□□□□ 0.05
HDAC1-206ENST00000476391 A0A0G2JLW4 131 aa15.35■□□□□ 0.05
HDAC1-206ENST00000476391 TTC26A0AVF1 554 aa15.35■□□□□ 0.05
HDAC1-206ENST00000476391 PRC1O43663 620 aa15.35■□□□□ 0.05
HDAC1-206ENST00000476391 ARID4AP29374 1257 aaPredicted RBP15.35■□□□□ 0.05
HDAC1-206ENST00000476391 KIF5AQ12840 1032 aa15.35■□□□□ 0.05
HDAC1-206ENST00000476391 TRIM29Q14134 588 aa15.35■□□□□ 0.05
HDAC1-206ENST00000476391 ZNF268Q14587 947 aaPredicted RBP15.35■□□□□ 0.05
HDAC1-206ENST00000476391 IMMTQ16891 758 aaKnown RBP15.35■□□□□ 0.05
HDAC1-206ENST00000476391 ZMYM1Q5SVZ6 1142 aa15.35■□□□□ 0.05
HDAC1-206ENST00000476391 ANKRD27Q96NW4 1050 aa15.35■□□□□ 0.05
HDAC1-206ENST00000476391 VPS16Q9H269 839 aa15.35■□□□□ 0.05
HDAC1-206ENST00000476391 NDST4Q9H3R1 872 aa15.35■□□□□ 0.05
HDAC1-206ENST00000476391 DBF4Q9UBU7 674 aaPredicted RBP15.35■□□□□ 0.05
HDAC1-206ENST00000476391 TFR2Q9UP52 801 aa15.35■□□□□ 0.05
HDAC1-206ENST00000476391 TULP1O00294 542 aaPredicted RBP15.35■□□□□ 0.05
HDAC1-206ENST00000476391 IFIT3O14879 490 aaKnown RBP15.35■□□□□ 0.05
HDAC1-206ENST00000476391 PAFAH1B1P43034 410 aa15.35■□□□□ 0.05
HDAC1-206ENST00000476391 CCDC38Q502W7 563 aa15.35■□□□□ 0.05
HDAC1-206ENST00000476391 WDR59Q6PJI9 974 aa15.35■□□□□ 0.05
HDAC1-206ENST00000476391 LINS1Q8NG48 757 aa15.35■□□□□ 0.05
HDAC1-206ENST00000476391 RBM33Q96EV2 1170 aaKnown RBP15.35■□□□□ 0.05
HDAC1-206ENST00000476391 AIFM3Q96NN9 605 aa15.35■□□□□ 0.05
HDAC1-206ENST00000476391 CHCHD3Q9NX63 227 aaKnown RBP15.35■□□□□ 0.05
HDAC1-206ENST00000476391 CAPN11Q9UMQ6 739 aa15.35■□□□□ 0.05
HDAC1-206ENST00000476391 SLC12A4Q9UP95 1085 aa15.35■□□□□ 0.05
HDAC1-206ENST00000476391 NDUFB9Q9Y6M9 179 aa15.35■□□□□ 0.05
HDAC1-206ENST00000476391 TACC1O75410 805 aa15.34■□□□□ 0.05
HDAC1-206ENST00000476391 TRIM37O94972 964 aa15.34■□□□□ 0.05
HDAC1-206ENST00000476391 HPDP32754 393 aaPredicted RBP15.34■□□□□ 0.05
HDAC1-206ENST00000476391 PPARAQ07869 468 aa15.34■□□□□ 0.05
HDAC1-206ENST00000476391 BIRC3Q13489 604 aa15.34■□□□□ 0.05
HDAC1-206ENST00000476391 LAMB3Q13751 1172 aa15.34■□□□□ 0.05
HDAC1-206ENST00000476391 CWF19L2Q2TBE0 894 aaKnown RBP15.34■□□□□ 0.05
HDAC1-206ENST00000476391 TEX9Q8N6V9 391 aa15.34■□□□□ 0.05
HDAC1-206ENST00000476391 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 221.7 ms