RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 DIS3Q9Y2L1 958 aaKnown RBP19.2■□□□□ 0.66
COL1A1-205ENST00000476387 SZT2Q5T011 3432 aa19.19■□□□□ 0.66
COL1A1-205ENST00000476387 TTLL1O95922 423 aa19.19■□□□□ 0.66
COL1A1-205ENST00000476387 KCTD2Q14681 263 aa19.19■□□□□ 0.66
COL1A1-205ENST00000476387 ALX1Q15699 326 aa19.19■□□□□ 0.66
COL1A1-205ENST00000476387 LRRC26Q2I0M4 334 aa19.19■□□□□ 0.66
COL1A1-205ENST00000476387 PRPF38AQ8NAV1 312 aaKnown RBP19.19■□□□□ 0.66
COL1A1-205ENST00000476387 GMCL1P1Q8NEA9 526 aa19.19■□□□□ 0.66
COL1A1-205ENST00000476387 NEDD1Q8NHV4 660 aa19.19■□□□□ 0.66
COL1A1-205ENST00000476387 CEP95Q96GE4 821 aa19.19■□□□□ 0.66
COL1A1-205ENST00000476387 NUP88Q99567 741 aaPredicted RBP19.19■□□□□ 0.66
COL1A1-205ENST00000476387 TEX13BQ9BXU2 312 aa19.19■□□□□ 0.66
COL1A1-205ENST00000476387 ZMYM6O95789 1325 aa19.19■□□□□ 0.66
COL1A1-205ENST00000476387 HSPD1P10809 573 aaKnown RBP19.18■□□□□ 0.66
COL1A1-205ENST00000476387 CTDSPL2Q05D32 466 aa19.18■□□□□ 0.66
COL1A1-205ENST00000476387 TTC22Q5TAA0 569 aa19.18■□□□□ 0.66
COL1A1-205ENST00000476387 CWC27Q6UX04 472 aaKnown RBP19.18■□□□□ 0.66
COL1A1-205ENST00000476387 ARRDC4Q8NCT1 418 aa19.18■□□□□ 0.66
COL1A1-205ENST00000476387 LAMA3Q16787 3333 aa19.18■□□□□ 0.66
COL1A1-205ENST00000476387 ZNFX1Q9P2E3 1918 aaKnown RBP19.17■□□□□ 0.66
COL1A1-205ENST00000476387 ATP2A1O14983 1001 aa19.17■□□□□ 0.66
COL1A1-205ENST00000476387 SYN1P17600 705 aa19.17■□□□□ 0.66
COL1A1-205ENST00000476387 PPP4R3BQ5MIZ7 849 aa19.17■□□□□ 0.66
COL1A1-205ENST00000476387 SENP6Q9GZR1 1112 aaPredicted RBP19.17■□□□□ 0.66
COL1A1-205ENST00000476387 ANAPC4Q9UJX5 808 aa19.17■□□□□ 0.66
COL1A1-205ENST00000476387 FEM1BQ9UK73 627 aa19.17■□□□□ 0.66
COL1A1-205ENST00000476387 DNAH12Q6ZR08 3092 aa19.17■□□□□ 0.66
COL1A1-205ENST00000476387 TSPY2A6NKD2 308 aa19.16■□□□□ 0.66
COL1A1-205ENST00000476387 FGAP02671 866 aa19.16■□□□□ 0.66
COL1A1-205ENST00000476387 MAGEA10P43363 369 aaPredicted RBP19.16■□□□□ 0.66
COL1A1-205ENST00000476387 TFAP4Q01664 338 aa19.16■□□□□ 0.66
COL1A1-205ENST00000476387 ZNF792Q3KQV3 632 aa19.16■□□□□ 0.66
COL1A1-205ENST00000476387 FAM47AQ5JRC9 791 aa19.16■□□□□ 0.66
COL1A1-205ENST00000476387 TOMM22Q9NS69 142 aa19.16■□□□□ 0.66
COL1A1-205ENST00000476387 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.16■□□□□ 0.66
COL1A1-205ENST00000476387 KBTBD13C9JR72 458 aa19.15■□□□□ 0.66
COL1A1-205ENST00000476387 ZBED4O75132 1171 aa19.15■□□□□ 0.66
COL1A1-205ENST00000476387 PGK2P07205 417 aa19.15■□□□□ 0.66
COL1A1-205ENST00000476387 GSPT1P15170 499 aaKnown RBP19.15■□□□□ 0.66
COL1A1-205ENST00000476387 SNRNP48Q6IEG0 339 aaKnown RBP19.15■□□□□ 0.66
COL1A1-205ENST00000476387 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.15■□□□□ 0.66
COL1A1-205ENST00000476387 MSL3Q8N5Y2 521 aaKnown RBP19.15■□□□□ 0.66
COL1A1-205ENST00000476387 TINF2Q9BSI4 451 aa19.15■□□□□ 0.66
COL1A1-205ENST00000476387 SLC38A10Q9HBR0 1119 aa19.15■□□□□ 0.66
COL1A1-205ENST00000476387 RANBP6O60518 1105 aaKnown RBP19.14■□□□□ 0.65
COL1A1-205ENST00000476387 FDX1P10109 184 aa19.14■□□□□ 0.65
COL1A1-205ENST00000476387 OAZ1P54368 228 aa19.14■□□□□ 0.65
COL1A1-205ENST00000476387 PRAMEF19Q5SWL8 479 aa19.14■□□□□ 0.65
COL1A1-205ENST00000476387 GJC2Q5T442 439 aaPredicted RBP19.14■□□□□ 0.65
COL1A1-205ENST00000476387 LRRC47Q8N1G4 583 aaKnown RBP19.14■□□□□ 0.65
COL1A1-205ENST00000476387 CTDP1Q9Y5B0 961 aaPredicted RBP19.14■□□□□ 0.65
COL1A1-205ENST00000476387 ORC4O43929 436 aa19.13■□□□□ 0.65
COL1A1-205ENST00000476387 BMP3P12645 472 aa19.13■□□□□ 0.65
COL1A1-205ENST00000476387 HAND2P61296 217 aa19.13■□□□□ 0.65
COL1A1-205ENST00000476387 SLFN13Q68D06 897 aa19.13■□□□□ 0.65
COL1A1-205ENST00000476387 KIFC2Q96AC6 838 aa19.13■□□□□ 0.65
COL1A1-205ENST00000476387 GMCL1Q96IK5 515 aa19.13■□□□□ 0.65
COL1A1-205ENST00000476387 PLXNA1Q9UIW2 1896 aa19.13■□□□□ 0.65
COL1A1-205ENST00000476387 DNAJC25-GNG10A0A024R161 153 aa19.12■□□□□ 0.65
COL1A1-205ENST00000476387 LRRC41Q15345 812 aa19.12■□□□□ 0.65
COL1A1-205ENST00000476387 RRP12Q5JTH9 1297 aaKnown RBP19.12■□□□□ 0.65
COL1A1-205ENST00000476387 DDX11Q96FC9 970 aa19.12■□□□□ 0.65
COL1A1-205ENST00000476387 UBE2OQ9C0C9 1292 aaKnown RBP19.12■□□□□ 0.65
COL1A1-205ENST00000476387 FBXO40Q9UH90 709 aa19.12■□□□□ 0.65
COL1A1-205ENST00000476387 STX8Q9UNK0 236 aa19.12■□□□□ 0.65
COL1A1-205ENST00000476387 CNPY2Q9Y2B0 182 aa19.12■□□□□ 0.65
COL1A1-205ENST00000476387 RIPK3Q9Y572 518 aa19.12■□□□□ 0.65
COL1A1-205ENST00000476387 RAD50Q92878 1312 aa19.11■□□□□ 0.65
COL1A1-205ENST00000476387 SYNGAP1Q96PV0 1343 aa19.11■□□□□ 0.65
COL1A1-205ENST00000476387 SOX1O00570 391 aaPredicted RBP19.11■□□□□ 0.65
COL1A1-205ENST00000476387 RARBP10826 455 aa19.11■□□□□ 0.65
COL1A1-205ENST00000476387 PCP11498 1178 aaKnown RBP19.11■□□□□ 0.65
COL1A1-205ENST00000476387 STAT2P52630 851 aa19.11■□□□□ 0.65
COL1A1-205ENST00000476387 ATN1P54259 1190 aaPredicted RBP19.11■□□□□ 0.65
COL1A1-205ENST00000476387 RTP1P59025 263 aa19.11■□□□□ 0.65
COL1A1-205ENST00000476387 LRIT3Q3SXY7 679 aa19.11■□□□□ 0.65
COL1A1-205ENST00000476387 ANO1Q5XXA6 986 aa19.11■□□□□ 0.65
COL1A1-205ENST00000476387 GPR153Q6NV75 609 aa19.11■□□□□ 0.65
COL1A1-205ENST00000476387 CENPQQ7L2Z9 268 aaPredicted RBP19.11■□□□□ 0.65
COL1A1-205ENST00000476387 ZNF467Q7Z7K2 595 aaPredicted RBP19.11■□□□□ 0.65
COL1A1-205ENST00000476387 FAM160B2Q86V87 743 aa19.11■□□□□ 0.65
COL1A1-205ENST00000476387 TDHQ8IZJ6 230 aa19.11■□□□□ 0.65
COL1A1-205ENST00000476387 CPXCR1Q8N123 301 aa19.11■□□□□ 0.65
COL1A1-205ENST00000476387 CHST13Q8NET6 341 aa19.11■□□□□ 0.65
COL1A1-205ENST00000476387 CHURC1Q8WUH1 139 aa19.11■□□□□ 0.65
COL1A1-205ENST00000476387 RNF41Q9H4P4 317 aaPredicted RBP19.11■□□□□ 0.65
COL1A1-205ENST00000476387 INCENPQ9NQS7 918 aa19.11■□□□□ 0.65
COL1A1-205ENST00000476387 ISY1Q9ULR0 285 aaKnown RBP19.11■□□□□ 0.65
COL1A1-205ENST00000476387 PLA2G6O60733 806 aa19.1■□□□□ 0.65
COL1A1-205ENST00000476387 FGRP09769 529 aa19.1■□□□□ 0.65
COL1A1-205ENST00000476387 ZNF865P0CJ78 1059 aaPredicted RBP19.1■□□□□ 0.65
COL1A1-205ENST00000476387 AKR1A1P14550 325 aa19.1■□□□□ 0.65
COL1A1-205ENST00000476387 SLC1A4P43007 532 aa19.1■□□□□ 0.65
COL1A1-205ENST00000476387 SNX17Q15036 470 aa19.1■□□□□ 0.65
COL1A1-205ENST00000476387 AKNAD1Q5T1N1 836 aa19.1■□□□□ 0.65
COL1A1-205ENST00000476387 MAMDC4Q6UXC1 1216 aa19.1■□□□□ 0.65
COL1A1-205ENST00000476387 SLC39A5Q6ZMH5 540 aa19.1■□□□□ 0.65
COL1A1-205ENST00000476387 MFSD6Q6ZSS7 791 aa19.1■□□□□ 0.65
COL1A1-205ENST00000476387 RUFY2Q8WXA3 655 aa19.1■□□□□ 0.65
COL1A1-205ENST00000476387 DSCC1Q9BVC3 393 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms