RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-211ENST00000475835 ST20-MTHFSA0A0A6YYL1 179 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 MCF2LO15068 1137 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 ACTN4O43707 911 aaKnown RBP4.28□□□□□ -1.72
LSM2-211ENST00000475835 IDH3BO43837 385 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 PPP1R12BO60237 982 aaPredicted RBP4.28□□□□□ -1.72
LSM2-211ENST00000475835 FOXD2O60548 495 aaPredicted RBP4.28□□□□□ -1.72
LSM2-211ENST00000475835 COBLO75128 1261 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 LUC7L3O95232 432 aaKnown RBP4.28□□□□□ -1.72
LSM2-211ENST00000475835 SLC4A2P04920 1241 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 PARP1P09874 1014 aaKnown RBP4.28□□□□□ -1.72
LSM2-211ENST00000475835 PCP11498 1178 aaKnown RBP4.28□□□□□ -1.72
LSM2-211ENST00000475835 RAC2P15153 192 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 PRKAR1BP31321 381 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 PRKAR2BP31323 418 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 GNALP38405 381 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 PSMC4P43686 418 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 CENPAP49450 140 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 PMS2P54278 862 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 RUNX1T1Q06455 604 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 LRRC74AQ0VAA2 488 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 PAK2Q13177 524 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 SNX1Q13596 522 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 MOGSQ13724 837 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 SPCS2Q15005 226 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 BRD3Q15059 726 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 C15orf59Q2T9L4 293 aaPredicted RBP4.28□□□□□ -1.72
LSM2-211ENST00000475835 KMT5BQ4FZB7 885 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 ANKRD39Q53RE8 183 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 ALFQ53S48 1182 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 INO80DQ53TQ3 878 aaPredicted RBP4.28□□□□□ -1.72
LSM2-211ENST00000475835 ZC3H12BQ5HYM0 836 aaKnown RBP4.28□□□□□ -1.72
LSM2-211ENST00000475835 CFAP157Q5JU67 520 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 ZBTB41Q5SVQ8 909 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 CCDC183Q5T5S1 534 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 KIAA1614Q5VZ46 1190 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 UNC5DQ6UXZ4 953 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 ARHGEF18Q6ZSZ5 1173 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 TTLL7Q6ZT98 887 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 INTS8Q75QN2 995 aaKnown RBP4.28□□□□□ -1.72
LSM2-211ENST00000475835 RASGRP2Q7LDG7 609 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 CCDC112Q8NEF3 446 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 FLCNQ8NFG4 579 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 GDAP1Q8TB36 358 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 EPS8L3Q8TE67 593 aaKnown RBP4.28□□□□□ -1.72
LSM2-211ENST00000475835 CACTINQ8WUQ7 758 aaKnown RBP4.28□□□□□ -1.72
LSM2-211ENST00000475835 SMARCE1Q969G3 411 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 ZKSCAN4Q969J2 545 aaPredicted RBP4.28□□□□□ -1.72
LSM2-211ENST00000475835 SH3KBP1Q96B97 665 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 ARMC5Q96C12 935 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 SPDL1Q96EA4 605 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 COG3Q96JB2 828 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 SNX27Q96L92 541 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 C16orf45Q96MC5 204 aaPredicted RBP4.28□□□□□ -1.72
LSM2-211ENST00000475835 ANKRD27Q96NW4 1050 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 CRBNQ96SW2 442 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 TCF12Q99081 682 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 CCT7Q99832 543 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 JPH2Q9BR39 696 aaPredicted RBP4.28□□□□□ -1.72
LSM2-211ENST00000475835 SPZ1Q9BXG8 430 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 AGXT2Q9BYV1 514 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 ZNF700Q9H0M5 742 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 OSBPL3Q9H4L5 887 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 BRD9Q9H8M2 597 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 VRTNQ9H8Y1 702 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 PLEKHA5Q9HAU0 1116 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 PARVBQ9HBI1 364 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 CD93Q9NPY3 652 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 ANO2Q9NQ90 1003 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 PIH1D1Q9NWS0 290 aaKnown RBP4.28□□□□□ -1.72
LSM2-211ENST00000475835 NLRP2Q9NX02 1062 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 HESX1Q9UBX0 185 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 ATPIF1Q9UII2 106 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 TTC7AQ9ULT0 858 aaPredicted RBP4.28□□□□□ -1.72
LSM2-211ENST00000475835 PA2G4Q9UQ80 394 aaKnown RBP4.28□□□□□ -1.72
LSM2-211ENST00000475835 SNX5Q9Y5X3 404 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 SYNJ2O15056 1496 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 ABCC10Q5T3U5 1492 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 ERBINQ96RT1 1412 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 MADDQ8WXG6 1647 aa4.28□□□□□ -1.72
LSM2-211ENST00000475835 ARHGAP5Q13017 1502 aa4.27□□□□□ -1.73
LSM2-211ENST00000475835 ABCC2Q92887 1545 aa4.27□□□□□ -1.73
LSM2-211ENST00000475835 KIAA1210Q9ULL0 1709 aa4.27□□□□□ -1.73
LSM2-211ENST00000475835 A2MP01023 1474 aa4.27□□□□□ -1.73
LSM2-211ENST00000475835 SYNJ2BP-COX16A0A087WUM0 186 aa4.27□□□□□ -1.73
LSM2-211ENST00000475835 ARPC4-TTLL3A0A0A6YYG9 625 aa4.27□□□□□ -1.73
LSM2-211ENST00000475835 PLEKHG3A1L390 1219 aa4.27□□□□□ -1.73
LSM2-211ENST00000475835 AKR1B15C9JRZ8 316 aaPredicted RBP4.27□□□□□ -1.73
LSM2-211ENST00000475835 NDC80O14777 642 aa4.27□□□□□ -1.73
LSM2-211ENST00000475835 ZBTB39O15060 712 aa4.27□□□□□ -1.73
LSM2-211ENST00000475835 DNAJC6O75061 913 aa4.27□□□□□ -1.73
LSM2-211ENST00000475835 ADAMTS4O75173 837 aa4.27□□□□□ -1.73
LSM2-211ENST00000475835 DNAJC8O75937 253 aaPredicted RBP4.27□□□□□ -1.73
LSM2-211ENST00000475835 TUBB4AP04350 444 aa4.27□□□□□ -1.73
LSM2-211ENST00000475835 EIF2S1P05198 315 aaKnown RBP4.27□□□□□ -1.73
LSM2-211ENST00000475835 KRT18P05783 430 aaKnown RBP4.27□□□□□ -1.73
LSM2-211ENST00000475835 PNMA6AP0CW24 399 aaPredicted RBP4.27□□□□□ -1.73
LSM2-211ENST00000475835 KRT13P13646 458 aa4.27□□□□□ -1.73
LSM2-211ENST00000475835 GBP2P32456 591 aaPredicted RBP4.27□□□□□ -1.73
LSM2-211ENST00000475835 ETV3P41162 512 aa4.27□□□□□ -1.73
LSM2-211ENST00000475835 SMTNP53814 917 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms