RNA–Protein interactions for RNA: ENST00000472476.5

TARDBP-204, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 1,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-204ENST00000472476 RASA1P20936 1047 aa17.25■□□□□ 0.35
TARDBP-204ENST00000472476 ACLYP53396 1101 aa17.25■□□□□ 0.35
TARDBP-204ENST00000472476 MAMDC4Q6UXC1 1216 aa17.25■□□□□ 0.35
TARDBP-204ENST00000472476 C16orf59Q7L2K0 433 aa17.25■□□□□ 0.35
TARDBP-204ENST00000472476 TOX2Q96NM4 488 aa17.25■□□□□ 0.35
TARDBP-204ENST00000472476 MYH4Q9Y623 1939 aa17.25■□□□□ 0.35
TARDBP-204ENST00000472476 CHD7Q9P2D1 2997 aa17.24■□□□□ 0.35
TARDBP-204ENST00000472476 GSG1L2A8MUP6 293 aa17.24■□□□□ 0.35
TARDBP-204ENST00000472476 RAG1P15918 1043 aa17.24■□□□□ 0.35
TARDBP-204ENST00000472476 CDK7P50613 346 aa17.24■□□□□ 0.35
TARDBP-204ENST00000472476 GRIN2CQ14957 1233 aa17.24■□□□□ 0.35
TARDBP-204ENST00000472476 RNPC3Q96LT9 517 aaKnown RBP17.24■□□□□ 0.35
TARDBP-204ENST00000472476 STRBPQ96SI9 672 aaKnown RBP17.24■□□□□ 0.35
TARDBP-204ENST00000472476 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.24■□□□□ 0.352e-12■□□□□ 8.7
TARDBP-204ENST00000472476 GOPCQ9HD26 462 aa17.24■□□□□ 0.35
TARDBP-204ENST00000472476 COG6Q9Y2V7 657 aa17.24■□□□□ 0.35
TARDBP-204ENST00000472476 REV3LO60673 3130 aa17.23■□□□□ 0.35
TARDBP-204ENST00000472476 IGKV6D-41A0A0C4DH26 115 aa17.23■□□□□ 0.35
TARDBP-204ENST00000472476 FPGSQ05932 587 aa17.23■□□□□ 0.35
TARDBP-204ENST00000472476 KCNA10Q16322 511 aa17.23■□□□□ 0.35
TARDBP-204ENST00000472476 SBK1Q52WX2 424 aa17.23■□□□□ 0.35
TARDBP-204ENST00000472476 USP38Q8NB14 1042 aa17.23■□□□□ 0.35
TARDBP-204ENST00000472476 SLF1Q9BQI6 1058 aa17.23■□□□□ 0.35
TARDBP-204ENST00000472476 TMEM39AQ9NV64 488 aa17.23■□□□□ 0.35
TARDBP-204ENST00000472476 NYAP2Q9P242 653 aa17.23■□□□□ 0.35
TARDBP-204ENST00000472476 TBX21Q9UL17 535 aa17.23■□□□□ 0.35
TARDBP-204ENST00000472476 SYNGAP1Q96PV0 1343 aa17.22■□□□□ 0.35
TARDBP-204ENST00000472476 TMEM265A0A087WTH1 108 aa17.22■□□□□ 0.35
TARDBP-204ENST00000472476 F5H6K3 240 aa17.22■□□□□ 0.35
TARDBP-204ENST00000472476 ATP2A1O14983 1001 aa17.22■□□□□ 0.35
TARDBP-204ENST00000472476 CTAGE5O15320 804 aa17.22■□□□□ 0.35
TARDBP-204ENST00000472476 HMMRO75330 724 aa17.22■□□□□ 0.35
TARDBP-204ENST00000472476 NDUFB10O96000 172 aa17.22■□□□□ 0.35
TARDBP-204ENST00000472476 FOSL2P15408 326 aa17.22■□□□□ 0.35
TARDBP-204ENST00000472476 KLRC3Q07444 240 aa17.22■□□□□ 0.35
TARDBP-204ENST00000472476 SNRNP48Q6IEG0 339 aaKnown RBP17.22■□□□□ 0.35
TARDBP-204ENST00000472476 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.22■□□□□ 0.35
TARDBP-204ENST00000472476 MIER1Q8N108 512 aa17.22■□□□□ 0.35
TARDBP-204ENST00000472476 MSL3Q8N5Y2 521 aaKnown RBP17.22■□□□□ 0.35
TARDBP-204ENST00000472476 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.22■□□□□ 0.351e-11■■□□□ 11.7
TARDBP-204ENST00000472476 TEX13BQ9BXU2 312 aa17.22■□□□□ 0.35
TARDBP-204ENST00000472476 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.21■□□□□ 0.35
TARDBP-204ENST00000472476 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.21■□□□□ 0.35
TARDBP-204ENST00000472476 RAD21O60216 631 aa17.21■□□□□ 0.35
TARDBP-204ENST00000472476 SMARCA5O60264 1052 aaPredicted RBP17.21■□□□□ 0.35
TARDBP-204ENST00000472476 TIMP1P01033 207 aa17.21■□□□□ 0.35
TARDBP-204ENST00000472476 CST5P28325 142 aaPredicted RBP17.21■□□□□ 0.35
TARDBP-204ENST00000472476 COPB2P35606 906 aa17.21■□□□□ 0.35
TARDBP-204ENST00000472476 RASIP1Q5U651 963 aa17.21■□□□□ 0.35
TARDBP-204ENST00000472476 OSBP2Q969R2 916 aa17.21■□□□□ 0.35
TARDBP-204ENST00000472476 KATNBL1Q9H079 304 aa17.21■□□□□ 0.35
TARDBP-204ENST00000472476 STARD7Q9NQZ5 370 aa17.21■□□□□ 0.35
TARDBP-204ENST00000472476 FAM184BQ9ULE4 1060 aa17.21■□□□□ 0.35
TARDBP-204ENST00000472476 DDX19BQ9UMR2 479 aa17.21■□□□□ 0.35
TARDBP-204ENST00000472476 CNPY2Q9Y2B0 182 aa17.21■□□□□ 0.35
TARDBP-204ENST00000472476 MOXD2PA6NHM9 499 aa17.2■□□□□ 0.34
TARDBP-204ENST00000472476 DUSP11O75319 330 aaKnown RBP17.2■□□□□ 0.34
TARDBP-204ENST00000472476 DNAJB2P25686 324 aa17.2■□□□□ 0.34
TARDBP-204ENST00000472476 ZNF467Q7Z7K2 595 aaPredicted RBP17.2■□□□□ 0.34
TARDBP-204ENST00000472476 STK11IPQ8N1F8 1099 aa17.2■□□□□ 0.34
TARDBP-204ENST00000472476 PRPF38AQ8NAV1 312 aaKnown RBP17.2■□□□□ 0.34
TARDBP-204ENST00000472476 MKL1Q969V6 931 aa17.2■□□□□ 0.34
TARDBP-204ENST00000472476 UPF3AQ9H1J1 476 aaKnown RBP17.2■□□□□ 0.34
TARDBP-204ENST00000472476 ARPP21Q9UBL0 812 aaPredicted RBP17.2■□□□□ 0.34
TARDBP-204ENST00000472476 GRXCR1A8MXD5 290 aa17.19■□□□□ 0.34
TARDBP-204ENST00000472476 DCDC2CA8MYV0 355 aa17.19■□□□□ 0.34
TARDBP-204ENST00000472476 ACVR2BQ13705 512 aa17.19■□□□□ 0.34
TARDBP-204ENST00000472476 TMEM240Q5SV17 173 aa17.19■□□□□ 0.34
TARDBP-204ENST00000472476 MFSD5Q6N075 450 aa17.19■□□□□ 0.34
TARDBP-204ENST00000472476 AMOTL1Q8IY63 956 aa17.19■□□□□ 0.34
TARDBP-204ENST00000472476 CPXCR1Q8N123 301 aa17.19■□□□□ 0.34
TARDBP-204ENST00000472476 NUP133Q8WUM0 1156 aa17.19■□□□□ 0.34
TARDBP-204ENST00000472476 DDX11Q96FC9 970 aa17.19■□□□□ 0.34
TARDBP-204ENST00000472476 SLC38A10Q9HBR0 1119 aa17.19■□□□□ 0.34
TARDBP-204ENST00000472476 RAVER2Q9HCJ3 691 aaKnown RBP17.19■□□□□ 0.34
TARDBP-204ENST00000472476 EPB41L4AQ9HCS5 686 aaPredicted RBP17.19■□□□□ 0.34
TARDBP-204ENST00000472476 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.19■□□□□ 0.34
TARDBP-204ENST00000472476 CLIP2Q9UDT6 1046 aa17.19■□□□□ 0.34
TARDBP-204ENST00000472476 ELP1O95163 1332 aa17.19■□□□□ 0.34
TARDBP-204ENST00000472476 ASGR1P07306 291 aa17.18■□□□□ 0.34
TARDBP-204ENST00000472476 MS4A1P11836 297 aa17.18■□□□□ 0.34
TARDBP-204ENST00000472476 PBX2P40425 430 aa17.18■□□□□ 0.34
TARDBP-204ENST00000472476 GJA9P57773 515 aa17.18■□□□□ 0.34
TARDBP-204ENST00000472476 NKX3-2P78367 333 aa17.18■□□□□ 0.34
TARDBP-204ENST00000472476 CCDC144BQ3MJ40 725 aa17.18■□□□□ 0.34
TARDBP-204ENST00000472476 GIMAP6Q6P9H5 292 aa17.18■□□□□ 0.34
TARDBP-204ENST00000472476 DDRGK1Q96HY6 314 aa17.18■□□□□ 0.34
TARDBP-204ENST00000472476 ZNF576Q9H609 170 aa17.18■□□□□ 0.34
TARDBP-204ENST00000472476 PRDM6Q9NQX0 595 aa17.18■□□□□ 0.34
TARDBP-204ENST00000472476 ZHX1Q9UKY1 873 aaPredicted RBP17.18■□□□□ 0.34
TARDBP-204ENST00000472476 GBF1Q92538 1859 aa17.18■□□□□ 0.34
TARDBP-204ENST00000472476 ZSCAN25Q6NSZ9 544 aa17.17■□□□□ 0.34
TARDBP-204ENST00000472476 MTMR4Q9NYA4 1195 aa17.17■□□□□ 0.34
TARDBP-204ENST00000472476 ASTN1O14525 1302 aa17.17■□□□□ 0.34
TARDBP-204ENST00000472476 NCOR1O75376 2440 aa17.16■□□□□ 0.34
TARDBP-204ENST00000472476 MINDY4BA8MYZ0 360 aa17.16■□□□□ 0.34
TARDBP-204ENST00000472476 ARVCFO00192 962 aa17.16■□□□□ 0.34
TARDBP-204ENST00000472476 PRDM1O75626 825 aa17.16■□□□□ 0.34
TARDBP-204ENST00000472476 C6orf222P0C671 652 aaPredicted RBP17.16■□□□□ 0.34
TARDBP-204ENST00000472476 CSF2RAP15509 400 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms