RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 DSPP15924 2871 aaKnown RBP8.38□□□□□ -1.07
HDAC3-206ENST00000471968 WDFY3Q8IZQ1 3526 aa8.38□□□□□ -1.07
HDAC3-206ENST00000471968 ZNF236Q9UL36 1845 aa8.38□□□□□ -1.07
HDAC3-206ENST00000471968 H7C1W4 665 aa8.37□□□□□ -1.07
HDAC3-206ENST00000471968 NCK2O43639 380 aa8.37□□□□□ -1.07
HDAC3-206ENST00000471968 TBX10O75333 385 aa8.37□□□□□ -1.07
HDAC3-206ENST00000471968 PROS1P07225 676 aa8.37□□□□□ -1.07
HDAC3-206ENST00000471968 ERCC3P19447 782 aa8.37□□□□□ -1.07
HDAC3-206ENST00000471968 CST5P28325 142 aaPredicted RBP8.37□□□□□ -1.07
HDAC3-206ENST00000471968 ZEB1P37275 1124 aaPredicted RBP8.37□□□□□ -1.07
HDAC3-206ENST00000471968 CTC1Q2NKJ3 1217 aa8.37□□□□□ -1.07
HDAC3-206ENST00000471968 CAVIN4Q5BKX8 364 aa8.37□□□□□ -1.07
HDAC3-206ENST00000471968 PRR23BQ6ZRT6 265 aa8.37□□□□□ -1.07
HDAC3-206ENST00000471968 SHCBP1Q8NEM2 672 aa8.37□□□□□ -1.07
HDAC3-206ENST00000471968 TINF2Q9BSI4 451 aa8.37□□□□□ -1.07
HDAC3-206ENST00000471968 RTKNQ9BST9 563 aa8.37□□□□□ -1.07
HDAC3-206ENST00000471968 MOV10L1Q9BXT6 1211 aaKnown RBP8.37□□□□□ -1.07
HDAC3-206ENST00000471968 TIMELESSQ9UNS1 1208 aa8.37□□□□□ -1.07
HDAC3-206ENST00000471968 LHX6Q9UPM6 363 aa8.37□□□□□ -1.07
HDAC3-206ENST00000471968 IGF2RP11717 2491 aa8.36□□□□□ -1.07
HDAC3-206ENST00000471968 USP17L15C9J2P7 530 aa8.36□□□□□ -1.07
HDAC3-206ENST00000471968 USP17L13C9JLJ4 530 aa8.36□□□□□ -1.07
HDAC3-206ENST00000471968 USP17L11C9JVI0 530 aa8.36□□□□□ -1.07
HDAC3-206ENST00000471968 USP17L18D6R9N7 530 aa8.36□□□□□ -1.07
HDAC3-206ENST00000471968 USP17L22D6RA61 530 aa8.36□□□□□ -1.07
HDAC3-206ENST00000471968 USP17L17D6RBQ6 530 aa8.36□□□□□ -1.07
HDAC3-206ENST00000471968 USP17L19D6RCP7 530 aa8.36□□□□□ -1.07
HDAC3-206ENST00000471968 USP17L20D6RJB6 530 aa8.36□□□□□ -1.07
HDAC3-206ENST00000471968 DDX58O95786 925 aaKnown RBP8.36□□□□□ -1.07
HDAC3-206ENST00000471968 HOXB7P09629 217 aa8.36□□□□□ -1.07
HDAC3-206ENST00000471968 USP17L24Q0WX57 530 aa8.36□□□□□ -1.07
HDAC3-206ENST00000471968 GCKRQ14397 625 aa8.36□□□□□ -1.07
HDAC3-206ENST00000471968 ZYXQ15942 572 aaKnown RBP8.36□□□□□ -1.07
HDAC3-206ENST00000471968 TAF7LQ5H9L4 462 aa8.36□□□□□ -1.07
HDAC3-206ENST00000471968 GNASQ5JWF2 1037 aa8.36□□□□□ -1.07
HDAC3-206ENST00000471968 SLC43A3Q8NBI5 491 aa8.36□□□□□ -1.07
HDAC3-206ENST00000471968 RAD9AQ99638 391 aa8.36□□□□□ -1.07
HDAC3-206ENST00000471968 SPC25Q9HBM1 224 aa8.36□□□□□ -1.07
HDAC3-206ENST00000471968 CNPY2Q9Y2B0 182 aa8.36□□□□□ -1.07
HDAC3-206ENST00000471968 ATAD5Q96QE3 1844 aa8.36□□□□□ -1.07
HDAC3-206ENST00000471968 NEURL1BA8MQ27 555 aa8.35□□□□□ -1.07
HDAC3-206ENST00000471968 DUSP11O75319 330 aaKnown RBP8.35□□□□□ -1.07
HDAC3-206ENST00000471968 CYP2C9P11712 490 aa8.35□□□□□ -1.07
HDAC3-206ENST00000471968 KCNA4P22459 653 aa8.35□□□□□ -1.07
HDAC3-206ENST00000471968 PRDX5P30044 214 aa8.35□□□□□ -1.07
HDAC3-206ENST00000471968 WDR5P61964 334 aaKnown RBP8.35□□□□□ -1.07
HDAC3-206ENST00000471968 DEFB103AP81534 67 aa8.35□□□□□ -1.07
HDAC3-206ENST00000471968 RING1Q06587 406 aa8.35□□□□□ -1.07
HDAC3-206ENST00000471968 NEXNQ0ZGT2 675 aa8.35□□□□□ -1.07
HDAC3-206ENST00000471968 ITGA7Q13683 1181 aa8.35□□□□□ -1.07
HDAC3-206ENST00000471968 USP17L2Q6R6M4 530 aa8.35□□□□□ -1.07
HDAC3-206ENST00000471968 MFSD1Q9H3U5 465 aa8.35□□□□□ -1.07
HDAC3-206ENST00000471968 FAM184BQ9ULE4 1060 aa8.35□□□□□ -1.07
HDAC3-206ENST00000471968 LAS1LQ9Y4W2 734 aaKnown RBP8.35□□□□□ -1.07
HDAC3-206ENST00000471968 SIP14410 1827 aa8.35□□□□□ -1.07
HDAC3-206ENST00000471968 SPDYE16A6NNV3 312 aaPredicted RBP8.34□□□□□ -1.07
HDAC3-206ENST00000471968 PRR5-ARHGAP8B1AHC4 643 aa8.34□□□□□ -1.07
HDAC3-206ENST00000471968 LINC01565O15544 149 aa8.34□□□□□ -1.07
HDAC3-206ENST00000471968 BAIAP3O94812 1187 aa8.34□□□□□ -1.07
HDAC3-206ENST00000471968 GJB5O95377 273 aa8.34□□□□□ -1.07
HDAC3-206ENST00000471968 PGK2P07205 417 aa8.34□□□□□ -1.07
HDAC3-206ENST00000471968 ASNSP08243 561 aa8.34□□□□□ -1.07
HDAC3-206ENST00000471968 JAG1P78504 1218 aa8.34□□□□□ -1.07
HDAC3-206ENST00000471968 ARHGAP8P85298 464 aa8.34□□□□□ -1.07
HDAC3-206ENST00000471968 HYAL1Q12794 435 aa8.34□□□□□ -1.07
HDAC3-206ENST00000471968 GPM6BQ13491 265 aa8.34□□□□□ -1.07
HDAC3-206ENST00000471968 SHROOM1Q2M3G4 852 aaPredicted RBP8.34□□□□□ -1.07
HDAC3-206ENST00000471968 DUSP27Q5VZP5 1158 aa8.34□□□□□ -1.07
HDAC3-206ENST00000471968 FAM117BQ6P1L5 589 aa8.34□□□□□ -1.07
HDAC3-206ENST00000471968 CXCL17Q6UXB2 119 aa8.34□□□□□ -1.07
HDAC3-206ENST00000471968 LBX2Q6XYB7 198 aa8.34□□□□□ -1.07
HDAC3-206ENST00000471968 CATSPERGQ6ZRH7 1159 aa8.34□□□□□ -1.07
HDAC3-206ENST00000471968 NCAPG2Q86XI2 1143 aa8.34□□□□□ -1.07
HDAC3-206ENST00000471968 IGFLR1Q9H665 355 aa8.34□□□□□ -1.07
HDAC3-206ENST00000471968 INCENPQ9NQS7 918 aa8.34□□□□□ -1.07
HDAC3-206ENST00000471968 ZHX1Q9UKY1 873 aaPredicted RBP8.34□□□□□ -1.07
HDAC3-206ENST00000471968 ITPR1Q14643 2758 aa8.34□□□□□ -1.07
HDAC3-206ENST00000471968 MYO7AQ13402 2215 aa8.34□□□□□ -1.07
HDAC3-206ENST00000471968 GRIN2DO15399 1336 aa8.33□□□□□ -1.08
HDAC3-206ENST00000471968 CLSPNQ9HAW4 1339 aa8.33□□□□□ -1.08
HDAC3-206ENST00000471968 TAF4O00268 1085 aa8.33□□□□□ -1.08
HDAC3-206ENST00000471968 EYA4O95677 639 aa8.33□□□□□ -1.08
HDAC3-206ENST00000471968 ARP10275 920 aa8.33□□□□□ -1.08
HDAC3-206ENST00000471968 RFC2P35250 354 aa8.33□□□□□ -1.08
HDAC3-206ENST00000471968 GTF2F1P35269 517 aaKnown RBP eCLIP8.33□□□□□ -1.08
HDAC3-206ENST00000471968 NDUFV1P49821 464 aa8.33□□□□□ -1.08
HDAC3-206ENST00000471968 CLCN5P51795 746 aa8.33□□□□□ -1.08
HDAC3-206ENST00000471968 BEX3Q00994 111 aa8.33□□□□□ -1.08
HDAC3-206ENST00000471968 SCN5AQ14524 2016 aa8.33□□□□□ -1.08
HDAC3-206ENST00000471968 EPC2Q52LR7 807 aa8.33□□□□□ -1.08
HDAC3-206ENST00000471968 CCDC105Q8IYK2 499 aa8.33□□□□□ -1.08
HDAC3-206ENST00000471968 ABRAQ8N0Z2 381 aa8.33□□□□□ -1.08
HDAC3-206ENST00000471968 WDR66Q8TBY9 1149 aa8.33□□□□□ -1.08
HDAC3-206ENST00000471968 PLEKHF1Q96S99 279 aa8.33□□□□□ -1.08
HDAC3-206ENST00000471968 HNRNPABQ99729 332 aaKnown RBP8.33□□□□□ -1.08
HDAC3-206ENST00000471968 PHF7Q9BWX1 381 aaPredicted RBP8.33□□□□□ -1.08
HDAC3-206ENST00000471968 SPATC1LQ9H0A9 340 aa8.33□□□□□ -1.08
HDAC3-206ENST00000471968 MYO18BQ8IUG5 2567 aa8.32□□□□□ -1.08
HDAC3-206ENST00000471968 LAMA5O15230 3695 aa8.32□□□□□ -1.08
HDAC3-206ENST00000471968 PI4KAP2A4QPH2 592 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms