RNA–Protein interactions for RNA: ENST00000470495.1

HOXB3-205, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 4,208 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-205ENST00000470495 USP40Q9NVE5 1235 aa18.53■□□□□ 0.56
HOXB3-205ENST00000470495 SALL1Q9NSC2 1324 aa18.53■□□□□ 0.56
HOXB3-205ENST00000470495 FOXN1O15353 648 aa18.53■□□□□ 0.56
HOXB3-205ENST00000470495 PRPF3O43395 683 aaKnown RBP18.53■□□□□ 0.56
HOXB3-205ENST00000470495 COBLO75128 1261 aa18.53■□□□□ 0.56
HOXB3-205ENST00000470495 ATP1A3P13637 1013 aa18.53■□□□□ 0.56
HOXB3-205ENST00000470495 RIOK1Q9BRS2 568 aaKnown RBP18.53■□□□□ 0.56
HOXB3-205ENST00000470495 STK36Q9NRP7 1315 aa18.52■□□□□ 0.56
HOXB3-205ENST00000470495 TMTC3Q6ZXV5 915 aa18.52■□□□□ 0.56
HOXB3-205ENST00000470495 TMOD2Q9NZR1 351 aa18.52■□□□□ 0.56
HOXB3-205ENST00000470495 ARFGEF2Q9Y6D5 1785 aa18.52■□□□□ 0.56
HOXB3-205ENST00000470495 KIF2AO00139 706 aaPredicted RBP18.52■□□□□ 0.56
HOXB3-205ENST00000470495 PPEF1O14829 653 aaPredicted RBP18.52■□□□□ 0.56
HOXB3-205ENST00000470495 TAX1BP1Q86VP1 789 aa18.52■□□□□ 0.56
HOXB3-205ENST00000470495 KIAA0825Q8IV33 1275 aa18.52■□□□□ 0.56
HOXB3-205ENST00000470495 KIAA1524Q8TCG1 905 aa18.52■□□□□ 0.56
HOXB3-205ENST00000470495 STRCP1A6NGW2 1772 aa18.52■□□□□ 0.56
HOXB3-205ENST00000470495 CCNT1O60563 726 aaKnown RBP18.52■□□□□ 0.55
HOXB3-205ENST00000470495 BBOX1O75936 387 aa18.52■□□□□ 0.55
HOXB3-205ENST00000470495 URI1O94763 535 aaPredicted RBP18.52■□□□□ 0.55
HOXB3-205ENST00000470495 LRRC8AQ8IWT6 810 aa18.52■□□□□ 0.55
HOXB3-205ENST00000470495 OTUD6BQ8N6M0 293 aa18.52■□□□□ 0.55
HOXB3-205ENST00000470495 ENGASEQ8NFI3 743 aa18.51■□□□□ 0.55
HOXB3-205ENST00000470495 FERMT2Q96AC1 680 aa18.51■□□□□ 0.55
HOXB3-205ENST00000470495 JPH2Q9BR39 696 aaPredicted RBP18.51■□□□□ 0.55
HOXB3-205ENST00000470495 CASP1P29466 404 aa18.51■□□□□ 0.55
HOXB3-205ENST00000470495 NKX2-3Q8TAU0 364 aa18.51■□□□□ 0.55
HOXB3-205ENST00000470495 NUP88Q99567 741 aaPredicted RBP18.51■□□□□ 0.55
HOXB3-205ENST00000470495 FAM107BQ9H098 131 aa18.51■□□□□ 0.55
HOXB3-205ENST00000470495 TCHHQ07283 1943 aa18.51■□□□□ 0.55
HOXB3-205ENST00000470495 GNA11P29992 359 aa18.51■□□□□ 0.55
HOXB3-205ENST00000470495 CCT6AP40227 531 aaKnown RBP18.51■□□□□ 0.55
HOXB3-205ENST00000470495 TMEM266Q2M3C6 531 aa18.51■□□□□ 0.55
HOXB3-205ENST00000470495 MLKLQ8NB16 471 aa18.51■□□□□ 0.55
HOXB3-205ENST00000470495 CTNND2Q9UQB3 1225 aa18.51■□□□□ 0.55
HOXB3-205ENST00000470495 MROH7-TTC4A0A0A0MT08 1334 aa18.51■□□□□ 0.55
HOXB3-205ENST00000470495 CCDC144BQ3MJ40 725 aa18.5■□□□□ 0.55
HOXB3-205ENST00000470495 RESP18Q5W5W9 173 aa18.5■□□□□ 0.55
HOXB3-205ENST00000470495 USP17L2Q6R6M4 530 aa18.5■□□□□ 0.55
HOXB3-205ENST00000470495 SMYD4Q8IYR2 804 aaPredicted RBP18.5■□□□□ 0.55
HOXB3-205ENST00000470495 CALML4Q96GE6 196 aa18.5■□□□□ 0.55
HOXB3-205ENST00000470495 TRIM6Q9C030 488 aaPredicted RBP18.5■□□□□ 0.55
HOXB3-205ENST00000470495 NTRK3Q16288 839 aa18.5■□□□□ 0.55
HOXB3-205ENST00000470495 SLC10A5Q5PT55 438 aa18.5■□□□□ 0.55
HOXB3-205ENST00000470495 TRIM47Q96LD4 638 aa18.5■□□□□ 0.55
HOXB3-205ENST00000470495 SF3B2Q13435 895 aaKnown RBP18.5■□□□□ 0.55
HOXB3-205ENST00000470495 TANGO6Q9C0B7 1094 aa18.5■□□□□ 0.55
HOXB3-205ENST00000470495 ANAPC4Q9UJX5 808 aa18.5■□□□□ 0.55
HOXB3-205ENST00000470495 EZRP15311 586 aaKnown RBP18.5■□□□□ 0.55
HOXB3-205ENST00000470495 ASIC1P78348 528 aa18.5■□□□□ 0.55
HOXB3-205ENST00000470495 GOLGA8FQ08AF8 430 aa18.5■□□□□ 0.55
HOXB3-205ENST00000470495 GOLGA8DPQ0D2H9 430 aa18.5■□□□□ 0.55
HOXB3-205ENST00000470495 DBNDD1Q9H9R9 158 aa18.5■□□□□ 0.55
HOXB3-205ENST00000470495 DYTNA2CJ06 578 aa18.49■□□□□ 0.55
HOXB3-205ENST00000470495 HMGB2P26583 209 aaKnown RBP18.49■□□□□ 0.55
HOXB3-205ENST00000470495 IQCB1Q15051 598 aa18.49■□□□□ 0.55
HOXB3-205ENST00000470495 SRBD1Q8N5C6 995 aaKnown RBP18.49■□□□□ 0.55
HOXB3-205ENST00000470495 SMCO2A6NFE2 343 aa18.49■□□□□ 0.55
HOXB3-205ENST00000470495 PTPREP23469 700 aa18.49■□□□□ 0.55
HOXB3-205ENST00000470495 GRIN1Q05586 938 aa18.49■□□□□ 0.55
HOXB3-205ENST00000470495 CCDC181Q5TID7 509 aa18.49■□□□□ 0.55
HOXB3-205ENST00000470495 FBXL16Q8N461 479 aa18.49■□□□□ 0.55
HOXB3-205ENST00000470495 N4BP2L2Q92802 583 aaPredicted RBP18.49■□□□□ 0.55
HOXB3-205ENST00000470495 PYM1Q9BRP8 204 aaKnown RBP18.49■□□□□ 0.55
HOXB3-205ENST00000470495 DNAI1Q9UI46 699 aa18.49■□□□□ 0.55
HOXB3-205ENST00000470495 CTDP1Q9Y5B0 961 aaPredicted RBP18.49■□□□□ 0.55
HOXB3-205ENST00000470495 ZSCAN12O43309 604 aa18.49■□□□□ 0.55
HOXB3-205ENST00000470495 ZNF76P36508 570 aa18.49■□□□□ 0.55
HOXB3-205ENST00000470495 RNF187Q5TA31 235 aaPredicted RBP18.49■□□□□ 0.55
HOXB3-205ENST00000470495 DHX40Q8IX18 779 aaKnown RBP18.49■□□□□ 0.55
HOXB3-205ENST00000470495 FAM217BQ9NTX9 383 aaPredicted RBP18.49■□□□□ 0.55
HOXB3-205ENST00000470495 COL18A1P39060 1754 aa18.49■□□□□ 0.55
HOXB3-205ENST00000470495 DISP2A7MBM2 1401 aa18.48■□□□□ 0.55
HOXB3-205ENST00000470495 TXKP42681 527 aa18.48■□□□□ 0.55
HOXB3-205ENST00000470495 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.48■□□□□ 0.55
HOXB3-205ENST00000470495 SRPRBQ9Y5M8 271 aaKnown RBP18.48■□□□□ 0.55
HOXB3-205ENST00000470495 RBM26Q5T8P6 1007 aaKnown RBP18.48■□□□□ 0.55
HOXB3-205ENST00000470495 STAG2Q8N3U4 1231 aa18.48■□□□□ 0.55
HOXB3-205ENST00000470495 CDK8P49336 464 aa18.48■□□□□ 0.55
HOXB3-205ENST00000470495 EVX2Q03828 476 aa18.48■□□□□ 0.55
HOXB3-205ENST00000470495 USP49Q70CQ1 688 aa18.48■□□□□ 0.55
HOXB3-205ENST00000470495 PLA2G4DQ86XP0 818 aa18.48■□□□□ 0.55
HOXB3-205ENST00000470495 RAB34Q9BZG1 259 aa18.48■□□□□ 0.55
HOXB3-205ENST00000470495 KCNF1Q9H3M0 494 aa18.48■□□□□ 0.55
HOXB3-205ENST00000470495 RNF168Q8IYW5 571 aaPredicted RBP18.47■□□□□ 0.55
HOXB3-205ENST00000470495 NLGN1Q8N2Q7 840 aa18.47■□□□□ 0.55
HOXB3-205ENST00000470495 RMND1Q9NWS8 449 aa18.47■□□□□ 0.55
HOXB3-205ENST00000470495 MAN1B1Q9UKM7 699 aa18.47■□□□□ 0.55
HOXB3-205ENST00000470495 ARHGAP29Q52LW3 1261 aa18.47■□□□□ 0.55
HOXB3-205ENST00000470495 VPS16Q9H269 839 aa18.47■□□□□ 0.55
HOXB3-205ENST00000470495 BMP2KQ9NSY1 1161 aaPredicted RBP18.47■□□□□ 0.55
HOXB3-205ENST00000470495 EXOC1Q9NV70 894 aa18.47■□□□□ 0.55
HOXB3-205ENST00000470495 SYNRGQ9UMZ2 1314 aa18.47■□□□□ 0.55
HOXB3-205ENST00000470495 MMP10P09238 476 aa18.47■□□□□ 0.55
HOXB3-205ENST00000470495 KARSQ15046 597 aaKnown RBP18.47■□□□□ 0.55
HOXB3-205ENST00000470495 NONOQ15233 471 aaKnown RBP eCLIP18.47■□□□□ 0.55
HOXB3-205ENST00000470495 PAXBP1Q9Y5B6 917 aa18.47■□□□□ 0.55
HOXB3-205ENST00000470495 ALDH1B1P30837 517 aa18.46■□□□□ 0.55
HOXB3-205ENST00000470495 TXNRD1Q16881 649 aa18.46■□□□□ 0.55
HOXB3-205ENST00000470495 CRACR2AQ9BSW2 395 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms