RNA–Protein interactions for RNA: ENST00000467329.5

PRPF3-202, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 5

Gene PRPF3, Length 2,595 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-202ENST00000467329 C6orf50Q9HD87 102 aa10.83□□□□□ -0.68
PRPF3-202ENST00000467329 PCDHA7Q9UN72 937 aa10.83□□□□□ -0.68
PRPF3-202ENST00000467329 MTMR7Q9Y216 660 aa10.83□□□□□ -0.68
PRPF3-202ENST00000467329 DOCK1Q14185 1865 aa10.83□□□□□ -0.68
PRPF3-202ENST00000467329 CTNND1O60716 968 aaKnown RBP10.83□□□□□ -0.68
PRPF3-202ENST00000467329 LMOD1P29536 600 aaPredicted RBP10.83□□□□□ -0.68
PRPF3-202ENST00000467329 SHROOM1Q2M3G4 852 aaPredicted RBP10.83□□□□□ -0.68
PRPF3-202ENST00000467329 L1TD1Q5T7N2 865 aaKnown RBP10.83□□□□□ -0.68
PRPF3-202ENST00000467329 CCDC73Q6ZRK6 1079 aa10.83□□□□□ -0.68
PRPF3-202ENST00000467329 KRT25Q7Z3Z0 450 aa10.83□□□□□ -0.68
PRPF3-202ENST00000467329 ADGRF4Q8IZF3 695 aa10.83□□□□□ -0.68
PRPF3-202ENST00000467329 TRPM4Q8TD43 1214 aa10.83□□□□□ -0.68
PRPF3-202ENST00000467329 MRPS27Q92552 414 aaKnown RBP10.83□□□□□ -0.68
PRPF3-202ENST00000467329 GPKOWQ92917 476 aaPredicted RBP eCLIP10.83□□□□□ -0.68
PRPF3-202ENST00000467329 ZNF341Q9BYN7 854 aa10.83□□□□□ -0.68
PRPF3-202ENST00000467329 DEFB129Q9H1M3 183 aa10.83□□□□□ -0.68
PRPF3-202ENST00000467329 ADARB2Q9NS39 739 aaKnown RBP10.83□□□□□ -0.68
PRPF3-202ENST00000467329 ZNF112Q9UJU3 913 aa10.83□□□□□ -0.68
PRPF3-202ENST00000467329 GOLGA6L3A6NEY3 463 aa10.82□□□□□ -0.68
PRPF3-202ENST00000467329 ZBTB5O15062 677 aa10.82□□□□□ -0.68
PRPF3-202ENST00000467329 BMP3P12645 472 aa10.82□□□□□ -0.68
PRPF3-202ENST00000467329 LIG1P18858 919 aa10.82□□□□□ -0.68
PRPF3-202ENST00000467329 CMA1P23946 247 aa10.82□□□□□ -0.68
PRPF3-202ENST00000467329 NAPAP54920 295 aa10.82□□□□□ -0.68
PRPF3-202ENST00000467329 TRAF1Q13077 416 aa10.82□□□□□ -0.68
PRPF3-202ENST00000467329 ORC2Q13416 577 aaPredicted RBP10.82□□□□□ -0.68
PRPF3-202ENST00000467329 AXDND1Q5T1B0 1012 aaPredicted RBP10.82□□□□□ -0.68
PRPF3-202ENST00000467329 LRSAM1Q6UWE0 723 aa10.82□□□□□ -0.68
PRPF3-202ENST00000467329 CDAN1Q8IWY9 1227 aa10.82□□□□□ -0.68
PRPF3-202ENST00000467329 CCAR1Q8IX12 1150 aaKnown RBP10.82□□□□□ -0.68
PRPF3-202ENST00000467329 ZNF579Q8NAF0 562 aaKnown RBP10.82□□□□□ -0.68
PRPF3-202ENST00000467329 L3MBTL3Q96JM7 780 aaPredicted RBP10.82□□□□□ -0.68
PRPF3-202ENST00000467329 UBA5Q9GZZ9 404 aa10.82□□□□□ -0.68
PRPF3-202ENST00000467329 CLSTN2Q9H4D0 955 aa10.82□□□□□ -0.68
PRPF3-202ENST00000467329 VEGFAP15692 232 aaPredicted RBP10.82□□□□□ -0.68
PRPF3-202ENST00000467329 FAM160A1Q05DH4 1040 aa10.82□□□□□ -0.68
PRPF3-202ENST00000467329 C9orf131Q5VYM1 1079 aa10.82□□□□□ -0.68
PRPF3-202ENST00000467329 TYW1BQ6NUM6 668 aa10.82□□□□□ -0.68
PRPF3-202ENST00000467329 VCPKMTQ9H867 229 aa10.82□□□□□ -0.68
PRPF3-202ENST00000467329 A0A1W2PRG0 241 aa10.81□□□□□ -0.68
PRPF3-202ENST00000467329 CTAGE5O15320 804 aa10.81□□□□□ -0.68
PRPF3-202ENST00000467329 TTC38Q5R3I4 469 aa10.81□□□□□ -0.68
PRPF3-202ENST00000467329 ANGEL2Q5VTE6 544 aaKnown RBP10.81□□□□□ -0.68
PRPF3-202ENST00000467329 MCTP2Q6DN12 878 aa10.81□□□□□ -0.68
PRPF3-202ENST00000467329 RBM43Q6ZSC3 357 aaKnown RBP10.81□□□□□ -0.68
PRPF3-202ENST00000467329 KRI1Q8N9T8 703 aaKnown RBP10.81□□□□□ -0.68
PRPF3-202ENST00000467329 FSIP1Q8NA03 581 aa10.81□□□□□ -0.68
PRPF3-202ENST00000467329 ENGASEQ8NFI3 743 aa10.81□□□□□ -0.68
PRPF3-202ENST00000467329 PIBF1Q8WXW3 757 aa10.81□□□□□ -0.68
PRPF3-202ENST00000467329 NUP62CLQ9H1M0 184 aa10.81□□□□□ -0.68
PRPF3-202ENST00000467329 ASTN2O75129 1339 aaPredicted RBP10.81□□□□□ -0.68
PRPF3-202ENST00000467329 GRIN3BO60391 1043 aa10.81□□□□□ -0.68
PRPF3-202ENST00000467329 PTPREP23469 700 aa10.81□□□□□ -0.68
PRPF3-202ENST00000467329 SYDE2Q5VT97 1194 aa10.81□□□□□ -0.68
PRPF3-202ENST00000467329 TTBK2Q6IQ55 1244 aa10.81□□□□□ -0.68
PRPF3-202ENST00000467329 KCTD1Q719H9 257 aa10.81□□□□□ -0.68
PRPF3-202ENST00000467329 MIGA2Q7L4E1 593 aa10.81□□□□□ -0.68
PRPF3-202ENST00000467329 FAM160B2Q86V87 743 aa10.81□□□□□ -0.68
PRPF3-202ENST00000467329 CPVLQ9H3G5 476 aa10.81□□□□□ -0.68
PRPF3-202ENST00000467329 PCDHA6Q9UN73 950 aa10.81□□□□□ -0.68
PRPF3-202ENST00000467329 PCDHA8Q9Y5H6 950 aa10.81□□□□□ -0.68
PRPF3-202ENST00000467329 CCDC194A0A1B0GVG4 234 aa10.8□□□□□ -0.68
PRPF3-202ENST00000467329 SMCO2A6NFE2 343 aa10.8□□□□□ -0.68
PRPF3-202ENST00000467329 EPS15P42566 896 aa10.8□□□□□ -0.68
PRPF3-202ENST00000467329 ADCY7P51828 1080 aa10.8□□□□□ -0.68
PRPF3-202ENST00000467329 HOMER1Q86YM7 354 aa10.8□□□□□ -0.68
PRPF3-202ENST00000467329 FERMT2Q96AC1 680 aa10.8□□□□□ -0.68
PRPF3-202ENST00000467329 VAT1LQ9HCJ6 419 aa10.8□□□□□ -0.68
PRPF3-202ENST00000467329 RIC8AQ9NPQ8 531 aa10.8□□□□□ -0.68
PRPF3-202ENST00000467329 DACT1Q9NYF0 836 aa10.8□□□□□ -0.68
PRPF3-202ENST00000467329 GGA3Q9NZ52 723 aa10.8□□□□□ -0.68
PRPF3-202ENST00000467329 FBXO2Q9UK22 296 aaPredicted RBP10.8□□□□□ -0.68
PRPF3-202ENST00000467329 SRPRBQ9Y5M8 271 aaKnown RBP10.8□□□□□ -0.68
PRPF3-202ENST00000467329 USP17L10C9JJH3 530 aa10.8□□□□□ -0.68
PRPF3-202ENST00000467329 MRE11P49959 708 aa10.8□□□□□ -0.68
PRPF3-202ENST00000467329 HIRAP54198 1017 aaPredicted RBP10.8□□□□□ -0.68
PRPF3-202ENST00000467329 SUPT20HL1Q3ZLR7 823 aa10.8□□□□□ -0.68
PRPF3-202ENST00000467329 EARS2Q5JPH6 523 aaKnown RBP10.8□□□□□ -0.68
PRPF3-202ENST00000467329 NOL9Q5SY16 702 aaKnown RBP10.8□□□□□ -0.68
PRPF3-202ENST00000467329 RESP18Q5W5W9 173 aa10.8□□□□□ -0.68
PRPF3-202ENST00000467329 LPAR1Q92633 364 aa10.8□□□□□ -0.68
PRPF3-202ENST00000467329 TIGD1Q96MW7 591 aa10.8□□□□□ -0.68
PRPF3-202ENST00000467329 KIAA1683Q9H0B3 1180 aa10.8□□□□□ -0.68
PRPF3-202ENST00000467329 GOLPH3LQ9H4A5 285 aa10.8□□□□□ -0.68
PRPF3-202ENST00000467329 PCDHB6Q9Y5E3 794 aa10.8□□□□□ -0.68
PRPF3-202ENST00000467329 DDNO94850 711 aaPredicted RBP10.79□□□□□ -0.68
PRPF3-202ENST00000467329 DEKP35659 375 aaKnown RBP10.79□□□□□ -0.68
PRPF3-202ENST00000467329 ATP2C1P98194 919 aaPredicted RBP10.79□□□□□ -0.68
PRPF3-202ENST00000467329 CDC37Q16543 378 aaPredicted RBP10.79□□□□□ -0.68
PRPF3-202ENST00000467329 MAP3K11Q16584 847 aa10.79□□□□□ -0.68
PRPF3-202ENST00000467329 NBPF12Q5TAG4 269 aaPredicted RBP10.79□□□□□ -0.68
PRPF3-202ENST00000467329 PIK3AP1Q6ZUJ8 805 aa10.79□□□□□ -0.68
PRPF3-202ENST00000467329 FMR1NBQ8N0W7 255 aaPredicted RBP10.79□□□□□ -0.68
PRPF3-202ENST00000467329 REXO1Q8N1G1 1221 aaKnown RBP10.79□□□□□ -0.68
PRPF3-202ENST00000467329 ACER1Q8TDN7 264 aa10.79□□□□□ -0.68
PRPF3-202ENST00000467329 CHURC1Q8WUH1 139 aa10.79□□□□□ -0.68
PRPF3-202ENST00000467329 WDR18Q9BV38 432 aa10.79□□□□□ -0.68
PRPF3-202ENST00000467329 HPSEQ9Y251 543 aa10.79□□□□□ -0.68
PRPF3-202ENST00000467329 PAPPA2Q9BXP8 1791 aa10.79□□□□□ -0.68
PRPF3-202ENST00000467329 SSC5DA1L4H1 1573 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms