RNA–Protein interactions for RNA: ENST00000466416.1

ABCF3-205, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-205ENST00000466416 G3BP1Q13283 466 aaKnown RBP eCLIP11.22□□□□□ -0.61
ABCF3-205ENST00000466416 KIAA1755Q5JYT7 1200 aa11.22□□□□□ -0.61
ABCF3-205ENST00000466416 TMED8Q6PL24 325 aaPredicted RBP11.22□□□□□ -0.61
ABCF3-205ENST00000466416 ZNF512BQ96KM6 892 aaPredicted RBP11.22□□□□□ -0.61
ABCF3-205ENST00000466416 CD320Q9NPF0 282 aa11.22□□□□□ -0.61
ABCF3-205ENST00000466416 ZHX1Q9UKY1 873 aaPredicted RBP11.22□□□□□ -0.61
ABCF3-205ENST00000466416 FOCADQ5VW36 1801 aa11.21□□□□□ -0.61
ABCF3-205ENST00000466416 ZBBXA8MT70 800 aa11.21□□□□□ -0.61
ABCF3-205ENST00000466416 WDR46O15213 610 aaKnown RBP11.21□□□□□ -0.61
ABCF3-205ENST00000466416 CABYRO75952 493 aa11.21□□□□□ -0.61
ABCF3-205ENST00000466416 CA3P07451 260 aa11.21□□□□□ -0.61
ABCF3-205ENST00000466416 PFKMP08237 780 aa11.21□□□□□ -0.61
ABCF3-205ENST00000466416 CCL23P55773 120 aa11.21□□□□□ -0.61
ABCF3-205ENST00000466416 NKX3-2P78367 333 aa11.21□□□□□ -0.61
ABCF3-205ENST00000466416 ACVR2BQ13705 512 aa11.21□□□□□ -0.61
ABCF3-205ENST00000466416 CSPP1Q1MSJ5 1256 aa11.21□□□□□ -0.61
ABCF3-205ENST00000466416 SAMD1Q6SPF0 538 aaPredicted RBP11.21□□□□□ -0.61
ABCF3-205ENST00000466416 TMEM179Q6ZVK1 233 aa11.21□□□□□ -0.61
ABCF3-205ENST00000466416 ZNF467Q7Z7K2 595 aaPredicted RBP11.21□□□□□ -0.61
ABCF3-205ENST00000466416 GJD3Q8N144 294 aa11.21□□□□□ -0.61
ABCF3-205ENST00000466416 MIGA1Q8NAN2 632 aa11.21□□□□□ -0.61
ABCF3-205ENST00000466416 UIMC1Q96RL1 719 aa11.21□□□□□ -0.61
ABCF3-205ENST00000466416 NOC4LQ9BVI4 516 aaKnown RBP11.21□□□□□ -0.61
ABCF3-205ENST00000466416 ABHD16BQ9H3Z7 469 aa11.21□□□□□ -0.61
ABCF3-205ENST00000466416 VCPKMTQ9H867 229 aa11.21□□□□□ -0.61
ABCF3-205ENST00000466416 ARHGEF10LQ9HCE6 1279 aa11.21□□□□□ -0.61
ABCF3-205ENST00000466416 GPR108Q9NPR9 543 aa11.21□□□□□ -0.61
ABCF3-205ENST00000466416 TMX2Q9Y320 296 aa11.21□□□□□ -0.61
ABCF3-205ENST00000466416 VWA5AO00534 786 aa11.2□□□□□ -0.62
ABCF3-205ENST00000466416 GNAI3P08754 354 aa11.2□□□□□ -0.62
ABCF3-205ENST00000466416 IRX5P78411 483 aaPredicted RBP11.2□□□□□ -0.62
ABCF3-205ENST00000466416 KRT40Q6A162 431 aa11.2□□□□□ -0.62
ABCF3-205ENST00000466416 SPICE1Q8N0Z3 855 aa11.2□□□□□ -0.62
ABCF3-205ENST00000466416 PHOSPHO2Q8TCD6 241 aa11.2□□□□□ -0.62
ABCF3-205ENST00000466416 DDX11Q96FC9 970 aa11.2□□□□□ -0.62
ABCF3-205ENST00000466416 FBXL18Q96ME1 805 aa11.2□□□□□ -0.62
ABCF3-205ENST00000466416 MEIS3Q99687 375 aa11.2□□□□□ -0.62
ABCF3-205ENST00000466416 CERS4Q9HA82 394 aa11.2□□□□□ -0.62
ABCF3-205ENST00000466416 MRS2Q9HD23 443 aa11.2□□□□□ -0.62
ABCF3-205ENST00000466416 PIH1D3Q9NQM4 214 aaKnown RBP11.2□□□□□ -0.62
ABCF3-205ENST00000466416 LMCD1Q9NZU5 365 aa11.2□□□□□ -0.62
ABCF3-205ENST00000466416 CDK5RAP2Q96SN8 1893 aa11.2□□□□□ -0.62
ABCF3-205ENST00000466416 A0A0G2JMZ2 1700 aa11.2□□□□□ -0.62
ABCF3-205ENST00000466416 MYH1P12882 1939 aa11.19□□□□□ -0.62
ABCF3-205ENST00000466416 UMODL1Q5DID0 1318 aa11.19□□□□□ -0.62
ABCF3-205ENST00000466416 LRRC37A2A6NM11 1700 aa11.19□□□□□ -0.62
ABCF3-205ENST00000466416 DNAJC25-GNG10A0A024R161 153 aa11.19□□□□□ -0.62
ABCF3-205ENST00000466416 EPOPA6NHQ4 379 aa11.19□□□□□ -0.62
ABCF3-205ENST00000466416 KIF28PB7ZC32 967 aa11.19□□□□□ -0.62
ABCF3-205ENST00000466416 ZAP70P43403 619 aa11.19□□□□□ -0.62
ABCF3-205ENST00000466416 ITGA7Q13683 1181 aa11.19□□□□□ -0.62
ABCF3-205ENST00000466416 CCDC144BQ3MJ40 725 aa11.19□□□□□ -0.62
ABCF3-205ENST00000466416 SIAH1Q8IUQ4 282 aa11.19□□□□□ -0.62
ABCF3-205ENST00000466416 FAM178BQ8IXR5 827 aa11.19□□□□□ -0.62
ABCF3-205ENST00000466416 MAGEB6Q8N7X4 407 aa11.19□□□□□ -0.62
ABCF3-205ENST00000466416 ARNTL2Q8WYA1 636 aa11.19□□□□□ -0.62
ABCF3-205ENST00000466416 API5Q9BZZ5 524 aaKnown RBP11.19□□□□□ -0.62
ABCF3-205ENST00000466416 WNT8AQ9H1J5 351 aa11.19□□□□□ -0.62
ABCF3-205ENST00000466416 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.19□□□□□ -0.62
ABCF3-205ENST00000466416 ZNF214Q9UL59 606 aaPredicted RBP11.19□□□□□ -0.62
ABCF3-205ENST00000466416 REV3LO60673 3130 aa11.18□□□□□ -0.62
ABCF3-205ENST00000466416 CTAGE5O15320 804 aa11.18□□□□□ -0.62
ABCF3-205ENST00000466416 IDH1O75874 414 aaKnown RBP11.18□□□□□ -0.62
ABCF3-205ENST00000466416 ACTN1P12814 892 aa11.18□□□□□ -0.62
ABCF3-205ENST00000466416 TAP1Q03518 808 aa11.18□□□□□ -0.62
ABCF3-205ENST00000466416 ICA1Q05084 483 aa11.18□□□□□ -0.62
ABCF3-205ENST00000466416 GRB10Q13322 594 aa11.18□□□□□ -0.62
ABCF3-205ENST00000466416 VWCEQ96DN2 955 aa11.18□□□□□ -0.62
ABCF3-205ENST00000466416 SLC9A7Q96T83 725 aa11.18□□□□□ -0.62
ABCF3-205ENST00000466416 SMC4Q9NTJ3 1288 aa11.18□□□□□ -0.62
ABCF3-205ENST00000466416 SWAP70Q9UH65 585 aa11.18□□□□□ -0.62
ABCF3-205ENST00000466416 PPP1R9AQ9ULJ8 1098 aa11.18□□□□□ -0.62
ABCF3-205ENST00000466416 GBF1Q92538 1859 aa11.18□□□□□ -0.62
ABCF3-205ENST00000466416 TRANK1O15050 2925 aa11.18□□□□□ -0.62
ABCF3-205ENST00000466416 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.17□□□□□ -0.62
ABCF3-205ENST00000466416 E9PSI1 815 aa11.17□□□□□ -0.62
ABCF3-205ENST00000466416 ADCY6O43306 1168 aa11.17□□□□□ -0.62
ABCF3-205ENST00000466416 ZEB2O60315 1214 aa11.17□□□□□ -0.62
ABCF3-205ENST00000466416 SSTR3P32745 418 aaPredicted RBP11.17□□□□□ -0.62
ABCF3-205ENST00000466416 TTLL4Q14679 1199 aa11.17□□□□□ -0.62
ABCF3-205ENST00000466416 LEXMQ3ZCV2 418 aa11.17□□□□□ -0.62
ABCF3-205ENST00000466416 TNNI3KQ59H18 835 aa11.17□□□□□ -0.62
ABCF3-205ENST00000466416 CXCL17Q6UXB2 119 aa11.17□□□□□ -0.62
ABCF3-205ENST00000466416 REPS2Q8NFH8 660 aa11.17□□□□□ -0.62
ABCF3-205ENST00000466416 CCDC17Q96LX7 622 aa11.17□□□□□ -0.62
ABCF3-205ENST00000466416 AGBL1Q96MI9 1066 aa11.17□□□□□ -0.62
ABCF3-205ENST00000466416 DBNDD2Q9BQY9 259 aa11.17□□□□□ -0.62
ABCF3-205ENST00000466416 TEX13BQ9BXU2 312 aa11.17□□□□□ -0.62
ABCF3-205ENST00000466416 TRPV6Q9H1D0 765 aa11.17□□□□□ -0.62
ABCF3-205ENST00000466416 FBXO28Q9NVF7 368 aa11.17□□□□□ -0.62
ABCF3-205ENST00000466416 NOB1Q9ULX3 412 aaKnown RBP11.17□□□□□ -0.62
ABCF3-205ENST00000466416 FPGT-TNNI3KV9GXZ4 949 aa11.17□□□□□ -0.62
ABCF3-205ENST00000466416 B4GALT4O60513 344 aa11.16□□□□□ -0.62
ABCF3-205ENST00000466416 LPXNO60711 386 aa11.16□□□□□ -0.62
ABCF3-205ENST00000466416 SUPT20HL2P0C7V6 817 aa11.16□□□□□ -0.62
ABCF3-205ENST00000466416 BEX3Q00994 111 aa11.16□□□□□ -0.62
ABCF3-205ENST00000466416 FOXK2Q01167 660 aa11.16□□□□□ -0.62
ABCF3-205ENST00000466416 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.16□□□□□ -0.62
ABCF3-205ENST00000466416 SCLYQ96I15 445 aa11.16□□□□□ -0.62
ABCF3-205ENST00000466416 CRNKL1Q9BZJ0 848 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms