RNA–Protein interactions for RNA: ENST00000465399.5

ATG4B-214, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-214ENST00000465399 DDX11Q96FC9 970 aa16.96■□□□□ 0.31
ATG4B-214ENST00000465399 CLIP2Q9UDT6 1046 aa16.96■□□□□ 0.31
ATG4B-214ENST00000465399 SYNGAP1Q96PV0 1343 aa16.96■□□□□ 0.3
ATG4B-214ENST00000465399 A0A1W2PQ45 241 aaPredicted RBP16.95■□□□□ 0.3
ATG4B-214ENST00000465399 A0A1W2PQY0 241 aa16.95■□□□□ 0.3
ATG4B-214ENST00000465399 ZBED4O75132 1171 aa16.95■□□□□ 0.3
ATG4B-214ENST00000465399 CLTBP09497 229 aa16.95■□□□□ 0.3
ATG4B-214ENST00000465399 ZNF865P0CJ78 1059 aaPredicted RBP16.95■□□□□ 0.3
ATG4B-214ENST00000465399 TAL1P17542 331 aaPredicted RBP16.95■□□□□ 0.3
ATG4B-214ENST00000465399 TLE2Q04725 743 aa16.95■□□□□ 0.3
ATG4B-214ENST00000465399 SHHQ15465 462 aa16.95■□□□□ 0.3
ATG4B-214ENST00000465399 TSHZ3Q63HK5 1081 aa16.95■□□□□ 0.3
ATG4B-214ENST00000465399 FAM161BQ96MY7 647 aa16.95■□□□□ 0.3
ATG4B-214ENST00000465399 DCTPP1Q9H773 170 aa16.95■□□□□ 0.3
ATG4B-214ENST00000465399 EPB41L4AQ9HCS5 686 aaPredicted RBP16.95■□□□□ 0.3
ATG4B-214ENST00000465399 TACC3Q9Y6A5 838 aa16.95■□□□□ 0.3
ATG4B-214ENST00000465399 TRIM43BA6NCK2 446 aa16.94■□□□□ 0.3
ATG4B-214ENST00000465399 M0R2C6 588 aa16.94■□□□□ 0.3
ATG4B-214ENST00000465399 ATP2A1O14983 1001 aa16.94■□□□□ 0.3
ATG4B-214ENST00000465399 PRDM1O75626 825 aa16.94■□□□□ 0.3
ATG4B-214ENST00000465399 SLC4A3P48751 1232 aa16.94■□□□□ 0.3
ATG4B-214ENST00000465399 C9orf50Q5SZB4 431 aa16.94■□□□□ 0.3
ATG4B-214ENST00000465399 SH3RF1Q7Z6J0 888 aa16.94■□□□□ 0.3
ATG4B-214ENST00000465399 CPXCR1Q8N123 301 aa16.94■□□□□ 0.3
ATG4B-214ENST00000465399 KIFC2Q96AC6 838 aa16.94■□□□□ 0.3
ATG4B-214ENST00000465399 TRIM43Q96BQ3 446 aaPredicted RBP16.94■□□□□ 0.3
ATG4B-214ENST00000465399 GUCD1Q96NT3 240 aa16.94■□□□□ 0.3
ATG4B-214ENST00000465399 NACAP1Q9BZK3 213 aa16.94■□□□□ 0.3
ATG4B-214ENST00000465399 SYNPO2Q9UMS6 1093 aa16.94■□□□□ 0.3
ATG4B-214ENST00000465399 IGKV6D-41A0A0C4DH26 115 aa16.93■□□□□ 0.3
ATG4B-214ENST00000465399 PQBP1O60828 265 aaKnown RBP16.93■□□□□ 0.3
ATG4B-214ENST00000465399 ADAMTS4O75173 837 aa16.93■□□□□ 0.3
ATG4B-214ENST00000465399 TTLL1O95922 423 aa16.93■□□□□ 0.3
ATG4B-214ENST00000465399 NUP133Q8WUM0 1156 aa16.93■□□□□ 0.3
ATG4B-214ENST00000465399 LENG1Q96BZ8 264 aaPredicted RBP16.93■□□□□ 0.3
ATG4B-214ENST00000465399 CEP95Q96GE4 821 aa16.93■□□□□ 0.3
ATG4B-214ENST00000465399 TSEN34Q9BSV6 310 aaKnown RBP16.93■□□□□ 0.3
ATG4B-214ENST00000465399 FEM1BQ9UK73 627 aa16.93■□□□□ 0.3
ATG4B-214ENST00000465399 ZHX1Q9UKY1 873 aaPredicted RBP16.93■□□□□ 0.3
ATG4B-214ENST00000465399 FAM184BQ9ULE4 1060 aa16.93■□□□□ 0.3
ATG4B-214ENST00000465399 RIPK3Q9Y572 518 aa16.93■□□□□ 0.3
ATG4B-214ENST00000465399 TTC41PQ6P2S7 1318 aa16.93■□□□□ 0.3
ATG4B-214ENST00000465399 SYNRGQ9UMZ2 1314 aa16.93■□□□□ 0.3
ATG4B-214ENST00000465399 UNC80Q8N2C7 3258 aa16.92■□□□□ 0.3
ATG4B-214ENST00000465399 PLIN4Q96Q06 1357 aa16.92■□□□□ 0.3
ATG4B-214ENST00000465399 CUL9Q8IWT3 2517 aa16.92■□□□□ 0.3
ATG4B-214ENST00000465399 DNAJC25-GNG10A0A024R161 153 aa16.92■□□□□ 0.3
ATG4B-214ENST00000465399 PATL2C9JE40 543 aaKnown RBP16.92■□□□□ 0.3
ATG4B-214ENST00000465399 ERC2O15083 957 aa16.92■□□□□ 0.3
ATG4B-214ENST00000465399 SLC3A2P08195 630 aaKnown RBP16.92■□□□□ 0.3
ATG4B-214ENST00000465399 RAG1P15918 1043 aa16.92■□□□□ 0.3
ATG4B-214ENST00000465399 ACLYP53396 1101 aa16.92■□□□□ 0.3
ATG4B-214ENST00000465399 PDE4BQ07343 736 aa16.92■□□□□ 0.3
ATG4B-214ENST00000465399 MAMDC4Q6UXC1 1216 aa16.92■□□□□ 0.3
ATG4B-214ENST00000465399 ZNF467Q7Z7K2 595 aaPredicted RBP16.92■□□□□ 0.3
ATG4B-214ENST00000465399 IFNL3Q8IZI9 196 aa16.92■□□□□ 0.3
ATG4B-214ENST00000465399 LRRC47Q8N1G4 583 aaKnown RBP16.92■□□□□ 0.3
ATG4B-214ENST00000465399 ANKRD35Q8N283 1001 aa16.92■□□□□ 0.3
ATG4B-214ENST00000465399 GMCL1P1Q8NEA9 526 aa16.92■□□□□ 0.3
ATG4B-214ENST00000465399 MKL1Q969V6 931 aa16.92■□□□□ 0.3
ATG4B-214ENST00000465399 SLC38A10Q9HBR0 1119 aa16.92■□□□□ 0.3
ATG4B-214ENST00000465399 RAVER2Q9HCJ3 691 aaKnown RBP16.92■□□□□ 0.3
ATG4B-214ENST00000465399 STARD7Q9NQZ5 370 aa16.92■□□□□ 0.3
ATG4B-214ENST00000465399 MTMR4Q9NYA4 1195 aa16.92■□□□□ 0.3
ATG4B-214ENST00000465399 FBXO40Q9UH90 709 aa16.92■□□□□ 0.3
ATG4B-214ENST00000465399 A0A0C4DFX4 3053 aa16.92■□□□□ 0.3
ATG4B-214ENST00000465399 MOXD2PA6NHM9 499 aa16.91■□□□□ 0.3
ATG4B-214ENST00000465399 TSPY3P0CV98 308 aa16.91■□□□□ 0.3
ATG4B-214ENST00000465399 TSPY8P0CW00 308 aa16.91■□□□□ 0.3
ATG4B-214ENST00000465399 OAZ1P54368 228 aa16.91■□□□□ 0.3
ATG4B-214ENST00000465399 SMAD3P84022 425 aaKnown RBP16.91■□□□□ 0.3
ATG4B-214ENST00000465399 CHST13Q8NET6 341 aa16.91■□□□□ 0.3
ATG4B-214ENST00000465399 TMEM39AQ9NV64 488 aa16.91■□□□□ 0.3
ATG4B-214ENST00000465399 ISY1Q9ULR0 285 aaKnown RBP16.91■□□□□ 0.3
ATG4B-214ENST00000465399 DCDC2CA8MYV0 355 aa16.9■□□□□ 0.3
ATG4B-214ENST00000465399 KIAA0355O15063 1070 aa16.9■□□□□ 0.3
ATG4B-214ENST00000465399 DUSP11O75319 330 aaKnown RBP16.9■□□□□ 0.3
ATG4B-214ENST00000465399 SNAI1O95863 264 aaPredicted RBP16.9■□□□□ 0.3
ATG4B-214ENST00000465399 BMP3P12645 472 aa16.9■□□□□ 0.3
ATG4B-214ENST00000465399 SLFN13Q68D06 897 aa16.9■□□□□ 0.3
ATG4B-214ENST00000465399 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.9■□□□□ 0.3
ATG4B-214ENST00000465399 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.9■□□□□ 0.3
ATG4B-214ENST00000465399 NEDD1Q8NHV4 660 aa16.9■□□□□ 0.3
ATG4B-214ENST00000465399 TOX2Q96NM4 488 aa16.9■□□□□ 0.3
ATG4B-214ENST00000465399 FSD1Q9BTV5 496 aa16.9■□□□□ 0.3
ATG4B-214ENST00000465399 NAPBQ9H115 298 aa16.9■□□□□ 0.3
ATG4B-214ENST00000465399 ABHD16BQ9H3Z7 469 aa16.9■□□□□ 0.3
ATG4B-214ENST00000465399 SPC25Q9HBM1 224 aa16.9■□□□□ 0.3
ATG4B-214ENST00000465399 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.9■□□□□ 0.3
ATG4B-214ENST00000465399 FDX1P10109 184 aa16.89■□□□□ 0.29
ATG4B-214ENST00000465399 ITGB8P26012 769 aa16.89■□□□□ 0.29
ATG4B-214ENST00000465399 FPGSQ05932 587 aa16.89■□□□□ 0.29
ATG4B-214ENST00000465399 ACVR2BQ13705 512 aa16.89■□□□□ 0.29
ATG4B-214ENST00000465399 KCNA10Q16322 511 aa16.89■□□□□ 0.29
ATG4B-214ENST00000465399 ANKRD33Q7Z3H0 272 aa16.89■□□□□ 0.29
ATG4B-214ENST00000465399 PCSK9Q8NBP7 692 aaKnown RBP16.89■□□□□ 0.29
ATG4B-214ENST00000465399 KLHDC9Q8NEP7 349 aa16.89■□□□□ 0.29
ATG4B-214ENST00000465399 RNPC3Q96LT9 517 aaKnown RBP16.89■□□□□ 0.29
ATG4B-214ENST00000465399 GLT1D1Q96MS3 346 aa16.89■□□□□ 0.29
ATG4B-214ENST00000465399 SEC62Q99442 399 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms