RNA–Protein interactions for RNA: ENST00000462723.1

RPA3-205, Transcript of replication protein A3, humanhuman

TSL 2

Gene RPA3, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-205ENST00000462723 F13A1P00488 732 aa9.49□□□□□ -0.89
RPA3-205ENST00000462723 SLURP2P0DP57 97 aa9.49□□□□□ -0.89
RPA3-205ENST00000462723 ATP2B2Q01814 1243 aa9.49□□□□□ -0.89
RPA3-205ENST00000462723 MAP3K10Q02779 954 aa9.49□□□□□ -0.89
RPA3-205ENST00000462723 TRIM29Q14134 588 aa9.49□□□□□ -0.89
RPA3-205ENST00000462723 TJAP1Q5JTD0 557 aa9.49□□□□□ -0.89
RPA3-205ENST00000462723 PPP1R18Q6NYC8 613 aa9.49□□□□□ -0.89
RPA3-205ENST00000462723 CLEC17AQ6ZS10 378 aa9.49□□□□□ -0.89
RPA3-205ENST00000462723 RGS22Q8NE09 1264 aa9.49□□□□□ -0.89
RPA3-205ENST00000462723 PHKBQ93100 1093 aa9.49□□□□□ -0.89
RPA3-205ENST00000462723 C8orf76Q96K31 380 aa9.49□□□□□ -0.89
RPA3-205ENST00000462723 LZTS2Q9BRK4 669 aa9.49□□□□□ -0.89
RPA3-205ENST00000462723 ALG1Q9BT22 464 aa9.49□□□□□ -0.89
RPA3-205ENST00000462723 RNF26Q9BY78 433 aaPredicted RBP9.49□□□□□ -0.89
RPA3-205ENST00000462723 GGA3Q9NZ52 723 aa9.49□□□□□ -0.89
RPA3-205ENST00000462723 RBM27Q9P2N5 1060 aaKnown RBP9.49□□□□□ -0.89
RPA3-205ENST00000462723 PGAP2Q9UHJ9 254 aa9.49□□□□□ -0.89
RPA3-205ENST00000462723 PPP2R3BQ9Y5P8 575 aa9.49□□□□□ -0.89
RPA3-205ENST00000462723 ASTN2O75129 1339 aaPredicted RBP9.49□□□□□ -0.89
RPA3-205ENST00000462723 PITPNM2Q9BZ72 1349 aa9.49□□□□□ -0.89
RPA3-205ENST00000462723 GOLGA6L22H0YM25 854 aa9.48□□□□□ -0.89
RPA3-205ENST00000462723 PLEKHA8P1O95397 391 aa9.48□□□□□ -0.89
RPA3-205ENST00000462723 DEXIO95424 95 aa9.48□□□□□ -0.89
RPA3-205ENST00000462723 GH2P01242 217 aa9.48□□□□□ -0.89
RPA3-205ENST00000462723 PARP1P09874 1014 aaKnown RBP9.48□□□□□ -0.89
RPA3-205ENST00000462723 ICA1Q05084 483 aa9.48□□□□□ -0.89
RPA3-205ENST00000462723 SEPT2Q15019 361 aa9.48□□□□□ -0.89
RPA3-205ENST00000462723 NFKBIBQ15653 356 aa9.48□□□□□ -0.89
RPA3-205ENST00000462723 DCAF15Q66K64 600 aa9.48□□□□□ -0.89
RPA3-205ENST00000462723 MIGA2Q7L4E1 593 aa9.48□□□□□ -0.89
RPA3-205ENST00000462723 NBPF11Q86T75 865 aa9.48□□□□□ -0.89
RPA3-205ENST00000462723 LRRC47Q8N1G4 583 aaKnown RBP9.48□□□□□ -0.89
RPA3-205ENST00000462723 CCDC82Q8N4S0 544 aa9.48□□□□□ -0.89
RPA3-205ENST00000462723 TEPSINQ96N21 525 aa9.48□□□□□ -0.89
RPA3-205ENST00000462723 NYAP2Q9P242 653 aa9.48□□□□□ -0.89
RPA3-205ENST00000462723 SYNPO2Q9UMS6 1093 aa9.48□□□□□ -0.89
RPA3-205ENST00000462723 MTMR7Q9Y216 660 aa9.48□□□□□ -0.89
RPA3-205ENST00000462723 SCN4AP35499 1836 aa9.47□□□□□ -0.89
RPA3-205ENST00000462723 IQCA1LA6NCM1 817 aa9.47□□□□□ -0.89
RPA3-205ENST00000462723 PALM3A6NDB9 673 aaPredicted RBP9.47□□□□□ -0.89
RPA3-205ENST00000462723 GLTPD2A6NH11 291 aa9.47□□□□□ -0.89
RPA3-205ENST00000462723 DDX11L8A8MPP1 907 aa9.47□□□□□ -0.89
RPA3-205ENST00000462723 PRPF3O43395 683 aaKnown RBP9.47□□□□□ -0.89
RPA3-205ENST00000462723 BAG4O95429 457 aaKnown RBP9.47□□□□□ -0.89
RPA3-205ENST00000462723 EEF2P13639 858 aaKnown RBP9.47□□□□□ -0.89
RPA3-205ENST00000462723 XBP1P17861 261 aa9.47□□□□□ -0.89
RPA3-205ENST00000462723 PTMSP20962 102 aa9.47□□□□□ -0.89
RPA3-205ENST00000462723 MCM4P33991 863 aa9.47□□□□□ -0.89
RPA3-205ENST00000462723 HIRAP54198 1017 aaPredicted RBP9.47□□□□□ -0.89
RPA3-205ENST00000462723 FUT2Q10981 343 aa9.47□□□□□ -0.89
RPA3-205ENST00000462723 SUPT20HL1Q3ZLR7 823 aa9.47□□□□□ -0.89
RPA3-205ENST00000462723 ASPRV1Q53RT3 343 aa9.47□□□□□ -0.89
RPA3-205ENST00000462723 TYW1BQ6NUM6 668 aa9.47□□□□□ -0.89
RPA3-205ENST00000462723 USP50Q70EL3 339 aaPredicted RBP9.47□□□□□ -0.89
RPA3-205ENST00000462723 CDC37L1Q7L3B6 337 aa9.47□□□□□ -0.89
RPA3-205ENST00000462723 CLEC10AQ8IUN9 316 aa9.47□□□□□ -0.89
RPA3-205ENST00000462723 CMTR1Q8N1G2 835 aaKnown RBP9.47□□□□□ -0.89
RPA3-205ENST00000462723 SRBD1Q8N5C6 995 aaKnown RBP9.47□□□□□ -0.89
RPA3-205ENST00000462723 FBXO18Q8NFZ0 1043 aa9.47□□□□□ -0.89
RPA3-205ENST00000462723 MKL1Q969V6 931 aa9.47□□□□□ -0.89
RPA3-205ENST00000462723 DCPSQ96C86 337 aaKnown RBP9.47□□□□□ -0.89
RPA3-205ENST00000462723 ZSCAN16Q9H4T2 348 aaPredicted RBP9.47□□□□□ -0.89
RPA3-205ENST00000462723 ARHGEF10LQ9HCE6 1279 aa9.47□□□□□ -0.89
RPA3-205ENST00000462723 GINM1Q9NU53 330 aa9.47□□□□□ -0.89
RPA3-205ENST00000462723 MAD2L2Q9UI95 211 aa9.47□□□□□ -0.89
RPA3-205ENST00000462723 ZBTB21Q9ULJ3 1066 aa9.47□□□□□ -0.89
RPA3-205ENST00000462723 SCAF8Q9UPN6 1271 aaKnown RBP9.47□□□□□ -0.89
RPA3-205ENST00000462723 CNTNAP5Q8WYK1 1306 aa9.47□□□□□ -0.89
RPA3-205ENST00000462723 POLR2AP24928 1970 aaKnown RBP9.46□□□□□ -0.89
RPA3-205ENST00000462723 USP17L5A8MUK1 530 aa9.46□□□□□ -0.9
RPA3-205ENST00000462723 KLRF2D3W0D1 207 aa9.46□□□□□ -0.9
RPA3-205ENST00000462723 ASNSP08243 561 aa9.46□□□□□ -0.9
RPA3-205ENST00000462723 PDHBP11177 359 aa9.46□□□□□ -0.9
RPA3-205ENST00000462723 SMARCA1P28370 1054 aa9.46□□□□□ -0.9
RPA3-205ENST00000462723 GUCY1A2P33402 732 aa9.46□□□□□ -0.9
RPA3-205ENST00000462723 EPHX2P34913 555 aa9.46□□□□□ -0.9
RPA3-205ENST00000462723 CAP2P40123 477 aa9.46□□□□□ -0.9
RPA3-205ENST00000462723 GUCY1B3Q02153 619 aa9.46□□□□□ -0.9
RPA3-205ENST00000462723 RRP1BQ14684 758 aaKnown RBP9.46□□□□□ -0.9
RPA3-205ENST00000462723 SAFBQ15424 915 aaKnown RBP eCLIP9.46□□□□□ -0.9
RPA3-205ENST00000462723 GPATCH4Q5T3I0 446 aaKnown RBP9.46□□□□□ -0.9
RPA3-205ENST00000462723 NBPF12Q5TAG4 269 aaPredicted RBP9.46□□□□□ -0.9
RPA3-205ENST00000462723 MCTP1Q6DN14 999 aa9.46□□□□□ -0.9
RPA3-205ENST00000462723 FERMT3Q86UX7 667 aa9.46□□□□□ -0.9
RPA3-205ENST00000462723 SULF1Q8IWU6 871 aa9.46□□□□□ -0.9
RPA3-205ENST00000462723 DCAF4Q8WV16 495 aa9.46□□□□□ -0.9
RPA3-205ENST00000462723 ZNF341Q9BYN7 854 aa9.46□□□□□ -0.9
RPA3-205ENST00000462723 SH2D4AQ9H788 454 aa9.46□□□□□ -0.9
RPA3-205ENST00000462723 ATAD5Q96QE3 1844 aa9.46□□□□□ -0.9
RPA3-205ENST00000462723 RAD21O60216 631 aa9.45□□□□□ -0.9
RPA3-205ENST00000462723 CTNND1O60716 968 aaKnown RBP9.45□□□□□ -0.9
RPA3-205ENST00000462723 GOLGA8HP0CJ92 632 aa9.45□□□□□ -0.9
RPA3-205ENST00000462723 SNHG28P0DPA3 235 aa9.45□□□□□ -0.9
RPA3-205ENST00000462723 JAG1P78504 1218 aa9.45□□□□□ -0.9
RPA3-205ENST00000462723 ZNF543Q08ER8 600 aa9.45□□□□□ -0.9
RPA3-205ENST00000462723 RESTQ13127 1097 aa9.45□□□□□ -0.9
RPA3-205ENST00000462723 GNL2Q13823 731 aaKnown RBP9.45□□□□□ -0.9
RPA3-205ENST00000462723 CCDC96Q2M329 555 aa9.45□□□□□ -0.9
RPA3-205ENST00000462723 SHROOM1Q2M3G4 852 aaPredicted RBP9.45□□□□□ -0.9
RPA3-205ENST00000462723 SLFN13Q68D06 897 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms