RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 GMCL1Q96IK5 515 aa22.41■■□□□ 1.18
COL5A1-203ENST00000460264 MMP19Q99542 508 aa22.41■■□□□ 1.18
COL5A1-203ENST00000460264 NBPF3Q9H094 633 aa22.41■■□□□ 1.18
COL5A1-203ENST00000460264 DIAPH3Q9NSV4 1193 aa22.41■■□□□ 1.18
COL5A1-203ENST00000460264 BMP3P12645 472 aa22.4■■□□□ 1.18
COL5A1-203ENST00000460264 HAND2P61296 217 aa22.4■■□□□ 1.18
COL5A1-203ENST00000460264 SNRNP48Q6IEG0 339 aaKnown RBP22.4■■□□□ 1.18
COL5A1-203ENST00000460264 KIFC2Q96AC6 838 aa22.4■■□□□ 1.18
COL5A1-203ENST00000460264 MAML3Q96JK9 1138 aa22.4■■□□□ 1.18
COL5A1-203ENST00000460264 HIP1O00291 1037 aa22.39■■□□□ 1.17
COL5A1-203ENST00000460264 ATP2A1O14983 1001 aa22.39■■□□□ 1.17
COL5A1-203ENST00000460264 NOVP48745 357 aa22.39■■□□□ 1.17
COL5A1-203ENST00000460264 KCTD2Q14681 263 aa22.39■■□□□ 1.17
COL5A1-203ENST00000460264 CWC27Q6UX04 472 aaKnown RBP22.39■■□□□ 1.17
COL5A1-203ENST00000460264 SLC38A10Q9HBR0 1119 aa22.39■■□□□ 1.17
COL5A1-203ENST00000460264 TOMM22Q9NS69 142 aa22.39■■□□□ 1.17
COL5A1-203ENST00000460264 DDX20Q9UHI6 824 aaKnown RBP22.39■■□□□ 1.17
COL5A1-203ENST00000460264 MSCO60682 206 aa22.38■■□□□ 1.17
COL5A1-203ENST00000460264 ZBED4O75132 1171 aa22.38■■□□□ 1.17
COL5A1-203ENST00000460264 SLC34A2O95436 690 aa22.38■■□□□ 1.17
COL5A1-203ENST00000460264 SLC1A4P43007 532 aa22.38■■□□□ 1.17
COL5A1-203ENST00000460264 STAT2P52630 851 aa22.38■■□□□ 1.17
COL5A1-203ENST00000460264 RRP12Q5JTH9 1297 aaKnown RBP22.38■■□□□ 1.17
COL5A1-203ENST00000460264 C11orf49Q9H6J7 331 aa22.38■■□□□ 1.17
COL5A1-203ENST00000460264 ISY1Q9ULR0 285 aaKnown RBP22.38■■□□□ 1.17
COL5A1-203ENST00000460264 RIPK3Q9Y572 518 aa22.38■■□□□ 1.17
COL5A1-203ENST00000460264 NR2E3Q9Y5X4 410 aa22.38■■□□□ 1.17
COL5A1-203ENST00000460264 TMEM232C9JQI7 657 aa22.37■■□□□ 1.17
COL5A1-203ENST00000460264 EVI5O60447 810 aa22.37■■□□□ 1.17
COL5A1-203ENST00000460264 PGK2P07205 417 aa22.37■■□□□ 1.17
COL5A1-203ENST00000460264 CNGA1P29973 690 aa22.37■■□□□ 1.17
COL5A1-203ENST00000460264 TBC1D10CQ8IV04 446 aa22.37■■□□□ 1.17
COL5A1-203ENST00000460264 CPXCR1Q8N123 301 aa22.37■■□□□ 1.17
COL5A1-203ENST00000460264 CTDP1Q9Y5B0 961 aaPredicted RBP22.37■■□□□ 1.17
COL5A1-203ENST00000460264 PFASO15067 1338 aa22.36■■□□□ 1.17
COL5A1-203ENST00000460264 PCP11498 1178 aaKnown RBP22.36■■□□□ 1.17
COL5A1-203ENST00000460264 GSPT1P15170 499 aaKnown RBP22.36■■□□□ 1.17
COL5A1-203ENST00000460264 MCCP23508 829 aa22.36■■□□□ 1.17
COL5A1-203ENST00000460264 OAZ1P54368 228 aa22.36■■□□□ 1.17
COL5A1-203ENST00000460264 HABP4Q5JVS0 413 aaKnown RBP22.36■■□□□ 1.17
COL5A1-203ENST00000460264 AKNAD1Q5T1N1 836 aa22.36■■□□□ 1.17
COL5A1-203ENST00000460264 TTC22Q5TAA0 569 aa22.36■■□□□ 1.17
COL5A1-203ENST00000460264 RASGRP2Q7LDG7 609 aa22.36■■□□□ 1.17
COL5A1-203ENST00000460264 STAG1Q8WVM7 1258 aa22.36■■□□□ 1.17
COL5A1-203ENST00000460264 CHMP4CQ96CF2 233 aa22.36■■□□□ 1.17
COL5A1-203ENST00000460264 RAVER2Q9HCJ3 691 aaKnown RBP22.36■■□□□ 1.17
COL5A1-203ENST00000460264 COL6A1P12109 1028 aa22.35■■□□□ 1.17
COL5A1-203ENST00000460264 ZNF792Q3KQV3 632 aa22.35■■□□□ 1.17
COL5A1-203ENST00000460264 FAM160B2Q86V87 743 aa22.35■■□□□ 1.17
COL5A1-203ENST00000460264 CHURC1Q8WUH1 139 aa22.35■■□□□ 1.17
COL5A1-203ENST00000460264 COLQQ9Y215 455 aaPredicted RBP22.35■■□□□ 1.17
COL5A1-203ENST00000460264 DIS3Q9Y2L1 958 aaKnown RBP22.35■■□□□ 1.17
COL5A1-203ENST00000460264 TRIOBPQ9H2D6 2365 aa22.34■■□□□ 1.17
COL5A1-203ENST00000460264 PLA2G6O60733 806 aa22.34■■□□□ 1.17
COL5A1-203ENST00000460264 FDX1P10109 184 aa22.34■■□□□ 1.17
COL5A1-203ENST00000460264 IKQ13123 557 aaPredicted RBP22.34■■□□□ 1.17
COL5A1-203ENST00000460264 RCSD1Q6JBY9 416 aa22.34■■□□□ 1.17
COL5A1-203ENST00000460264 MFSD6Q6ZSS7 791 aa22.34■■□□□ 1.17
COL5A1-203ENST00000460264 KCTD1Q719H9 257 aa22.34■■□□□ 1.17
COL5A1-203ENST00000460264 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.34■■□□□ 1.17
COL5A1-203ENST00000460264 TCP11L1Q9NUJ3 509 aa22.34■■□□□ 1.17
COL5A1-203ENST00000460264 SMCHD1A6NHR9 2005 aa22.34■■□□□ 1.17
COL5A1-203ENST00000460264 NEDD4P46934 1319 aa22.33■■□□□ 1.17
COL5A1-203ENST00000460264 MCM3APO60318 1980 aa22.33■■□□□ 1.17
COL5A1-203ENST00000460264 SEPT4O43236 478 aa22.33■■□□□ 1.17
COL5A1-203ENST00000460264 SLC4A3P48751 1232 aa22.33■■□□□ 1.17
COL5A1-203ENST00000460264 PRAMEF19Q5SWL8 479 aa22.33■■□□□ 1.17
COL5A1-203ENST00000460264 DSCC1Q9BVC3 393 aa22.33■■□□□ 1.17
COL5A1-203ENST00000460264 RNF41Q9H4P4 317 aaPredicted RBP22.33■■□□□ 1.17
COL5A1-203ENST00000460264 DNAJC25-GNG10A0A024R161 153 aa22.32■■□□□ 1.16
COL5A1-203ENST00000460264 ZNF213O14771 459 aa22.32■■□□□ 1.16
COL5A1-203ENST00000460264 TOP1P11387 765 aaKnown RBP22.32■■□□□ 1.16
COL5A1-203ENST00000460264 CHRDL2Q6WN34 429 aa22.32■■□□□ 1.16
COL5A1-203ENST00000460264 C7orf61Q8IZ16 206 aa22.32■■□□□ 1.16
COL5A1-203ENST00000460264 DCAF4Q8WV16 495 aa22.32■■□□□ 1.16
COL5A1-203ENST00000460264 TMEM47Q9BQJ4 181 aa22.32■■□□□ 1.16
COL5A1-203ENST00000460264 TINF2Q9BSI4 451 aa22.32■■□□□ 1.16
COL5A1-203ENST00000460264 IL25Q9H293 177 aa22.32■■□□□ 1.16
COL5A1-203ENST00000460264 NRBP1Q9UHY1 535 aa22.32■■□□□ 1.16
COL5A1-203ENST00000460264 MTMR7Q9Y216 660 aa22.32■■□□□ 1.16
COL5A1-203ENST00000460264 ZNF536O15090 1300 aa22.31■■□□□ 1.16
COL5A1-203ENST00000460264 CCDC96Q2M329 555 aa22.31■■□□□ 1.16
COL5A1-203ENST00000460264 CHST13Q8NET6 341 aa22.31■■□□□ 1.16
COL5A1-203ENST00000460264 DDX11Q96FC9 970 aa22.31■■□□□ 1.16
COL5A1-203ENST00000460264 FBXO40Q9UH90 709 aa22.31■■□□□ 1.16
COL5A1-203ENST00000460264 PRR12Q9ULL5 1215 aa22.31■■□□□ 1.16
COL5A1-203ENST00000460264 DNAH12Q6ZR08 3092 aa22.3■■□□□ 1.16
COL5A1-203ENST00000460264 DNM1LO00429 736 aa22.3■■□□□ 1.16
COL5A1-203ENST00000460264 ANO1Q5XXA6 986 aa22.3■■□□□ 1.16
COL5A1-203ENST00000460264 ESR2Q92731 530 aa22.3■■□□□ 1.16
COL5A1-203ENST00000460264 HOMER2Q9NSB8 354 aa22.3■■□□□ 1.16
COL5A1-203ENST00000460264 RANBP2P49792 3224 aaKnown RBP22.29■■□□□ 1.16
COL5A1-203ENST00000460264 ANKRD35Q8N283 1001 aa22.29■■□□□ 1.16
COL5A1-203ENST00000460264 MSL3Q8N5Y2 521 aaKnown RBP22.29■■□□□ 1.16
COL5A1-203ENST00000460264 AGBL1Q96MI9 1066 aa22.29■■□□□ 1.16
COL5A1-203ENST00000460264 RAD50Q92878 1312 aa22.29■■□□□ 1.16
COL5A1-203ENST00000460264 LCTP09848 1927 aa22.28■■□□□ 1.16
COL5A1-203ENST00000460264 TAL1P17542 331 aaPredicted RBP22.28■■□□□ 1.16
COL5A1-203ENST00000460264 NT5C2P49902 561 aa22.28■■□□□ 1.16
COL5A1-203ENST00000460264 SNAP25P60880 206 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms