RNA–Protein interactions for RNA: ENST00000458478.5

RPSA-204, Transcript of ribosomal protein SA, humanhuman

TSL 2

Gene RPSA, Length 874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-204ENST00000458478 RARBP10826 455 aa13.43□□□□□ -0.26
RPSA-204ENST00000458478 SLC4A3P48751 1232 aa13.43□□□□□ -0.26
RPSA-204ENST00000458478 SNX17Q15036 470 aa13.43□□□□□ -0.26
RPSA-204ENST00000458478 TRIM60Q495X7 471 aa13.43□□□□□ -0.26
RPSA-204ENST00000458478 ZMYM1Q5SVZ6 1142 aa13.43□□□□□ -0.26
RPSA-204ENST00000458478 NEDD1Q8NHV4 660 aa13.43□□□□□ -0.26
RPSA-204ENST00000458478 KIFC2Q96AC6 838 aa13.43□□□□□ -0.26
RPSA-204ENST00000458478 DDX11Q96FC9 970 aa13.43□□□□□ -0.26
RPSA-204ENST00000458478 FSD1Q9BTV5 496 aa13.43□□□□□ -0.26
RPSA-204ENST00000458478 NACAP1Q9BZK3 213 aa13.43□□□□□ -0.26
RPSA-204ENST00000458478 PLXNA1Q9UIW2 1896 aa13.43□□□□□ -0.26
RPSA-204ENST00000458478 FEM1BQ9UK73 627 aa13.43□□□□□ -0.26
RPSA-204ENST00000458478 DNAJC25-GNG10A0A024R161 153 aa13.42□□□□□ -0.26
RPSA-204ENST00000458478 SNAI1O95863 264 aaPredicted RBP13.42□□□□□ -0.26
RPSA-204ENST00000458478 TFAP4Q01664 338 aa13.42□□□□□ -0.26
RPSA-204ENST00000458478 PDE4BQ07343 736 aa13.42□□□□□ -0.26
RPSA-204ENST00000458478 C1orf53Q5VUE5 145 aa13.42□□□□□ -0.26
RPSA-204ENST00000458478 SLFN13Q68D06 897 aa13.42□□□□□ -0.26
RPSA-204ENST00000458478 SH3RF1Q7Z6J0 888 aa13.42□□□□□ -0.26
RPSA-204ENST00000458478 RNF180Q86T96 592 aa13.42□□□□□ -0.26
RPSA-204ENST00000458478 LRRC47Q8N1G4 583 aaKnown RBP13.42□□□□□ -0.26
RPSA-204ENST00000458478 SLC17A8Q8NDX2 589 aa13.42□□□□□ -0.26
RPSA-204ENST00000458478 GMCL1P1Q8NEA9 526 aa13.42□□□□□ -0.26
RPSA-204ENST00000458478 SLC38A10Q9HBR0 1119 aa13.42□□□□□ -0.26
RPSA-204ENST00000458478 RAVER2Q9HCJ3 691 aaKnown RBP13.42□□□□□ -0.26
RPSA-204ENST00000458478 MTMR10Q9NXD2 777 aa13.42□□□□□ -0.26
RPSA-204ENST00000458478 PHF24Q9UPV7 400 aa13.42□□□□□ -0.26
RPSA-204ENST00000458478 MYH4Q9Y623 1939 aa13.42□□□□□ -0.26
RPSA-204ENST00000458478 LAMA2P24043 3122 aaKnown RBP13.41□□□□□ -0.26
RPSA-204ENST00000458478 TRIM43BA6NCK2 446 aa13.41□□□□□ -0.26
RPSA-204ENST00000458478 TSPY3P0CV98 308 aa13.41□□□□□ -0.26
RPSA-204ENST00000458478 TSPY8P0CW00 308 aa13.41□□□□□ -0.26
RPSA-204ENST00000458478 AKR1A1P14550 325 aa13.41□□□□□ -0.26
RPSA-204ENST00000458478 MX1P20591 662 aa13.41□□□□□ -0.26
RPSA-204ENST00000458478 PPARAQ07869 468 aa13.41□□□□□ -0.26
RPSA-204ENST00000458478 MAMDC4Q6UXC1 1216 aa13.41□□□□□ -0.26
RPSA-204ENST00000458478 CCDC129Q6ZRS4 1044 aa13.41□□□□□ -0.26
RPSA-204ENST00000458478 MSL3Q8N5Y2 521 aaKnown RBP13.41□□□□□ -0.26
RPSA-204ENST00000458478 BADQ92934 168 aa13.41□□□□□ -0.26
RPSA-204ENST00000458478 TRIM43Q96BQ3 446 aaPredicted RBP13.41□□□□□ -0.26
RPSA-204ENST00000458478 LENG1Q96BZ8 264 aaPredicted RBP13.41□□□□□ -0.26
RPSA-204ENST00000458478 NAPBQ9H115 298 aa13.41□□□□□ -0.26
RPSA-204ENST00000458478 INCENPQ9NQS7 918 aa13.41□□□□□ -0.26
RPSA-204ENST00000458478 PRDM5Q9NQX1 630 aaPredicted RBP13.41□□□□□ -0.26
RPSA-204ENST00000458478 SYNPO2Q9UMS6 1093 aa13.41□□□□□ -0.26
RPSA-204ENST00000458478 CNPY2Q9Y2B0 182 aa13.41□□□□□ -0.26
RPSA-204ENST00000458478 CTDP1Q9Y5B0 961 aaPredicted RBP13.41□□□□□ -0.26
RPSA-204ENST00000458478 SALL3Q9BXA9 1300 aa13.4□□□□□ -0.26
RPSA-204ENST00000458478 POTEB2H3BUK9 544 aa13.4□□□□□ -0.26
RPSA-204ENST00000458478 FOXP2O15409 715 aa13.4□□□□□ -0.26
RPSA-204ENST00000458478 ADAMTS4O75173 837 aa13.4□□□□□ -0.26
RPSA-204ENST00000458478 SLC3A2P08195 630 aaKnown RBP13.4□□□□□ -0.26
RPSA-204ENST00000458478 BMP3P12645 472 aa13.4□□□□□ -0.26
RPSA-204ENST00000458478 TLE2Q04725 743 aa13.4□□□□□ -0.26
RPSA-204ENST00000458478 SHHQ15465 462 aa13.4□□□□□ -0.26
RPSA-204ENST00000458478 ANKRD45Q5TZF3 282 aa13.4□□□□□ -0.26
RPSA-204ENST00000458478 CHMP4CQ96CF2 233 aa13.4□□□□□ -0.26
RPSA-204ENST00000458478 PDLIM7Q9NR12 457 aa13.4□□□□□ -0.26
RPSA-204ENST00000458478 FAM184BQ9ULE4 1060 aa13.4□□□□□ -0.26
RPSA-204ENST00000458478 SYNGAP1Q96PV0 1343 aa13.39□□□□□ -0.27
RPSA-204ENST00000458478 TMEM232C9JQI7 657 aa13.39□□□□□ -0.27
RPSA-204ENST00000458478 ITGB8P26012 769 aa13.39□□□□□ -0.27
RPSA-204ENST00000458478 OAZ1P54368 228 aa13.39□□□□□ -0.27
RPSA-204ENST00000458478 RRP1P56182 461 aaKnown RBP13.39□□□□□ -0.27
RPSA-204ENST00000458478 CTDSPL2Q05D32 466 aa13.39□□□□□ -0.27
RPSA-204ENST00000458478 C9orf50Q5SZB4 431 aa13.39□□□□□ -0.27
RPSA-204ENST00000458478 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.39□□□□□ -0.27
RPSA-204ENST00000458478 ZNF467Q7Z7K2 595 aaPredicted RBP13.39□□□□□ -0.27
RPSA-204ENST00000458478 ANKRD35Q8N283 1001 aa13.39□□□□□ -0.27
RPSA-204ENST00000458478 KLHDC9Q8NEP7 349 aa13.39□□□□□ -0.27
RPSA-204ENST00000458478 CHST13Q8NET6 341 aa13.39□□□□□ -0.27
RPSA-204ENST00000458478 CRBNQ96SW2 442 aa13.39□□□□□ -0.27
RPSA-204ENST00000458478 IL17RBQ9NRM6 502 aa13.39□□□□□ -0.27
RPSA-204ENST00000458478 STXBP5LQ9Y2K9 1186 aa13.39□□□□□ -0.27
RPSA-204ENST00000458478 TACC3Q9Y6A5 838 aa13.39□□□□□ -0.27
RPSA-204ENST00000458478 PLIN4Q96Q06 1357 aa13.39□□□□□ -0.27
RPSA-204ENST00000458478 LTBP2Q14767 1821 aa13.39□□□□□ -0.27
RPSA-204ENST00000458478 A0A1W2PQ45 241 aaPredicted RBP13.38□□□□□ -0.27
RPSA-204ENST00000458478 A0A1W2PQY0 241 aa13.38□□□□□ -0.27
RPSA-204ENST00000458478 MCCP23508 829 aa13.38□□□□□ -0.27
RPSA-204ENST00000458478 ACLYP53396 1101 aa13.38□□□□□ -0.27
RPSA-204ENST00000458478 IRX5P78411 483 aaPredicted RBP13.38□□□□□ -0.27
RPSA-204ENST00000458478 ACVR2BQ13705 512 aa13.38□□□□□ -0.27
RPSA-204ENST00000458478 KCNA10Q16322 511 aa13.38□□□□□ -0.27
RPSA-204ENST00000458478 VPS53Q5VIR6 699 aa13.38□□□□□ -0.27
RPSA-204ENST00000458478 FAM109BQ6ICB4 259 aaPredicted RBP13.38□□□□□ -0.27
RPSA-204ENST00000458478 CCSAPQ6IQ19 270 aaPredicted RBP13.38□□□□□ -0.27
RPSA-204ENST00000458478 CHURC1Q8WUH1 139 aa13.38□□□□□ -0.27
RPSA-204ENST00000458478 STAG1Q8WVM7 1258 aa13.38□□□□□ -0.27
RPSA-204ENST00000458478 GMCL1Q96IK5 515 aa13.38□□□□□ -0.27
RPSA-204ENST00000458478 FGD4Q96M96 766 aa13.38□□□□□ -0.27
RPSA-204ENST00000458478 TSEN34Q9BSV6 310 aaKnown RBP13.38□□□□□ -0.27
RPSA-204ENST00000458478 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.38□□□□□ -0.27
RPSA-204ENST00000458478 FBXO40Q9UH90 709 aa13.38□□□□□ -0.27
RPSA-204ENST00000458478 ZHX1Q9UKY1 873 aaPredicted RBP13.38□□□□□ -0.27
RPSA-204ENST00000458478 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.38□□□□□ -0.27
RPSA-204ENST00000458478 SYNRGQ9UMZ2 1314 aa13.38□□□□□ -0.27
RPSA-204ENST00000458478 NMT2O60551 498 aa13.37□□□□□ -0.27
RPSA-204ENST00000458478 DUSP11O75319 330 aaKnown RBP13.37□□□□□ -0.27
RPSA-204ENST00000458478 FDX1P10109 184 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms