RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 AKAP10O43572 662 aa5.68□□□□□ -1.5
HMGN3P1-201ENST00000453847 PRC1O43663 620 aa5.68□□□□□ -1.5
HMGN3P1-201ENST00000453847 KPNA6O60684 536 aa5.68□□□□□ -1.5
HMGN3P1-201ENST00000453847 LRIG2O94898 1065 aa5.68□□□□□ -1.5
HMGN3P1-201ENST00000453847 SCG5P05408 212 aa5.68□□□□□ -1.5
HMGN3P1-201ENST00000453847 JMJD7P0C870 316 aa5.68□□□□□ -1.5
HMGN3P1-201ENST00000453847 SLURP2P0DP57 97 aa5.68□□□□□ -1.5
HMGN3P1-201ENST00000453847 BPIP17213 487 aa5.68□□□□□ -1.5
HMGN3P1-201ENST00000453847 ASPAP45381 313 aa5.68□□□□□ -1.5
HMGN3P1-201ENST00000453847 DGKGP49619 791 aa5.68□□□□□ -1.5
HMGN3P1-201ENST00000453847 NEK4P51957 841 aa5.68□□□□□ -1.5
HMGN3P1-201ENST00000453847 PRSS53Q2L4Q9 553 aa5.68□□□□□ -1.5
HMGN3P1-201ENST00000453847 SKOR2Q2VWA4 1001 aaPredicted RBP5.68□□□□□ -1.5
HMGN3P1-201ENST00000453847 CDCA2Q69YH5 1023 aaPredicted RBP5.68□□□□□ -1.5
HMGN3P1-201ENST00000453847 LYPD4Q6UWN0 246 aa5.68□□□□□ -1.5
HMGN3P1-201ENST00000453847 CDH24Q86UP0 819 aa5.68□□□□□ -1.5
HMGN3P1-201ENST00000453847 SMYD4Q8IYR2 804 aaPredicted RBP5.68□□□□□ -1.5
HMGN3P1-201ENST00000453847 WDR66Q8TBY9 1149 aa5.68□□□□□ -1.5
HMGN3P1-201ENST00000453847 FBXL18Q96ME1 805 aa5.68□□□□□ -1.5
HMGN3P1-201ENST00000453847 PRDM14Q9GZV8 571 aa5.68□□□□□ -1.5
HMGN3P1-201ENST00000453847 SLC5A4Q9NY91 659 aa5.68□□□□□ -1.5
HMGN3P1-201ENST00000453847 VAMP4O75379 141 aa5.67□□□□□ -1.5
HMGN3P1-201ENST00000453847 SCGB1D2O95969 90 aa5.67□□□□□ -1.5
HMGN3P1-201ENST00000453847 GNALP38405 381 aa5.67□□□□□ -1.5
HMGN3P1-201ENST00000453847 NEK2P51955 445 aa5.67□□□□□ -1.5
HMGN3P1-201ENST00000453847 MAP4K2Q12851 820 aa5.67□□□□□ -1.5
HMGN3P1-201ENST00000453847 PPP2R5AQ15172 486 aa5.67□□□□□ -1.5
HMGN3P1-201ENST00000453847 TRAPPC3LQ5T215 181 aa5.67□□□□□ -1.5
HMGN3P1-201ENST00000453847 ACAD11Q709F0 780 aa5.67□□□□□ -1.5
HMGN3P1-201ENST00000453847 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.67□□□□□ -1.5
HMGN3P1-201ENST00000453847 NECAB2Q7Z6G3 386 aa5.67□□□□□ -1.5
HMGN3P1-201ENST00000453847 C14orf80Q86SX3 495 aa5.67□□□□□ -1.5
HMGN3P1-201ENST00000453847 WDR75Q8IWA0 830 aaKnown RBP5.67□□□□□ -1.5
HMGN3P1-201ENST00000453847 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.67□□□□□ -1.5
HMGN3P1-201ENST00000453847 AHI1Q8N157 1196 aa5.67□□□□□ -1.5
HMGN3P1-201ENST00000453847 MFSD2AQ8NA29 543 aa5.67□□□□□ -1.5
HMGN3P1-201ENST00000453847 C12orf50Q8NA57 414 aaPredicted RBP5.67□□□□□ -1.5
HMGN3P1-201ENST00000453847 SYTL5Q8TDW5 730 aaPredicted RBP5.67□□□□□ -1.5
HMGN3P1-201ENST00000453847 COG1Q8WTW3 980 aa5.67□□□□□ -1.5
HMGN3P1-201ENST00000453847 PTPRN2Q92932 1015 aa5.67□□□□□ -1.5
HMGN3P1-201ENST00000453847 TRIM11Q96F44 468 aa5.67□□□□□ -1.5
HMGN3P1-201ENST00000453847 MCMBPQ9BTE3 642 aa5.67□□□□□ -1.5
HMGN3P1-201ENST00000453847 RTFDC1Q9BY42 306 aaPredicted RBP5.67□□□□□ -1.5
HMGN3P1-201ENST00000453847 RNF208Q9H0X6 261 aa5.67□□□□□ -1.5
HMGN3P1-201ENST00000453847 NKX2-4Q9H2Z4 354 aa5.67□□□□□ -1.5
HMGN3P1-201ENST00000453847 CYP4F12Q9HCS2 524 aa5.67□□□□□ -1.5
HMGN3P1-201ENST00000453847 PCOLCE2Q9UKZ9 415 aa5.67□□□□□ -1.5
HMGN3P1-201ENST00000453847 FHOD1Q9Y613 1164 aa5.67□□□□□ -1.5
HMGN3P1-201ENST00000453847 GABRDO14764 452 aa5.66□□□□□ -1.5
HMGN3P1-201ENST00000453847 OPA1O60313 960 aa5.66□□□□□ -1.5
HMGN3P1-201ENST00000453847 EFCAB14O75071 495 aa5.66□□□□□ -1.5
HMGN3P1-201ENST00000453847 CRTAMO95727 393 aa5.66□□□□□ -1.5
HMGN3P1-201ENST00000453847 CELA2BP08218 269 aaPredicted RBP5.66□□□□□ -1.5
HMGN3P1-201ENST00000453847 BCRP11274 1271 aa5.66□□□□□ -1.5
HMGN3P1-201ENST00000453847 ITGA4P13612 1032 aa5.66□□□□□ -1.5
HMGN3P1-201ENST00000453847 HOXC12P31275 282 aa5.66□□□□□ -1.5
HMGN3P1-201ENST00000453847 RHBDL3P58872 404 aa5.66□□□□□ -1.5
HMGN3P1-201ENST00000453847 PPP2R5DQ14738 602 aa5.66□□□□□ -1.5
HMGN3P1-201ENST00000453847 RNF219Q5W0B1 726 aaPredicted RBP5.66□□□□□ -1.5
HMGN3P1-201ENST00000453847 WWC2Q6AWC2 1192 aa5.66□□□□□ -1.5
HMGN3P1-201ENST00000453847 GPAT2Q6NUI2 795 aa5.66□□□□□ -1.5
HMGN3P1-201ENST00000453847 KCNT2Q6UVM3 1135 aa5.66□□□□□ -1.5
HMGN3P1-201ENST00000453847 WHAMMQ8TF30 809 aa5.66□□□□□ -1.5
HMGN3P1-201ENST00000453847 ACSS3Q9H6R3 686 aa5.66□□□□□ -1.5
HMGN3P1-201ENST00000453847 NOL6Q9H6R4 1146 aaKnown RBP5.66□□□□□ -1.5
HMGN3P1-201ENST00000453847 CRTAC1Q9NQ79 661 aa5.66□□□□□ -1.5
HMGN3P1-201ENST00000453847 MINPP1Q9UNW1 487 aa5.66□□□□□ -1.5
HMGN3P1-201ENST00000453847 DIS3Q9Y2L1 958 aaKnown RBP5.66□□□□□ -1.5
HMGN3P1-201ENST00000453847 PCDHA9Q9Y5H5 950 aa5.66□□□□□ -1.5
HMGN3P1-201ENST00000453847 TNKSO95271 1327 aa5.66□□□□□ -1.5
HMGN3P1-201ENST00000453847 M0R2C6 588 aa5.65□□□□□ -1.5
HMGN3P1-201ENST00000453847 DYNC1LI2O43237 492 aaPredicted RBP5.65□□□□□ -1.5
HMGN3P1-201ENST00000453847 PRPF3O43395 683 aaKnown RBP5.65□□□□□ -1.5
HMGN3P1-201ENST00000453847 IGFALSP35858 605 aa5.65□□□□□ -1.5
HMGN3P1-201ENST00000453847 ITKQ08881 620 aa5.65□□□□□ -1.5
HMGN3P1-201ENST00000453847 LCE2CQ5TA81 110 aa5.65□□□□□ -1.5
HMGN3P1-201ENST00000453847 LETMD1Q6P1Q0 360 aa5.65□□□□□ -1.5
HMGN3P1-201ENST00000453847 LINC00114Q6XXX2 140 aa5.65□□□□□ -1.5
HMGN3P1-201ENST00000453847 AGGF1Q8N302 714 aaeCLIP5.65□□□□□ -1.5
HMGN3P1-201ENST00000453847 FIBCD1Q8N539 461 aa5.65□□□□□ -1.5
HMGN3P1-201ENST00000453847 KCTD13Q8WZ19 329 aa5.65□□□□□ -1.5
HMGN3P1-201ENST00000453847 RELTQ969Z4 430 aa5.65□□□□□ -1.5
HMGN3P1-201ENST00000453847 MAGEB10Q96LZ2 347 aaPredicted RBP5.65□□□□□ -1.5
HMGN3P1-201ENST00000453847 ORAI3Q9BRQ5 295 aa5.65□□□□□ -1.5
HMGN3P1-201ENST00000453847 YIPF4Q9BSR8 244 aa5.65□□□□□ -1.5
HMGN3P1-201ENST00000453847 IRX2Q9BZI1 471 aaPredicted RBP5.65□□□□□ -1.5
HMGN3P1-201ENST00000453847 SSU72Q9NP77 194 aaKnown RBP5.65□□□□□ -1.5
HMGN3P1-201ENST00000453847 CYP26B1Q9NR63 512 aa5.65□□□□□ -1.5
HMGN3P1-201ENST00000453847 GFOD1Q9NXC2 390 aa5.65□□□□□ -1.5
HMGN3P1-201ENST00000453847 ZIM2Q9NZV7 527 aa5.65□□□□□ -1.5
HMGN3P1-201ENST00000453847 FBXL21Q9UKT6 434 aa5.65□□□□□ -1.5
HMGN3P1-201ENST00000453847 SNRPB2P08579 225 aaKnown RBP5.64□□□□□ -1.51
HMGN3P1-201ENST00000453847 ECI1P42126 302 aa5.64□□□□□ -1.51
HMGN3P1-201ENST00000453847 KCNJ6P48051 423 aa5.64□□□□□ -1.51
HMGN3P1-201ENST00000453847 RNF4P78317 190 aa5.64□□□□□ -1.51
HMGN3P1-201ENST00000453847 GRB10Q13322 594 aa5.64□□□□□ -1.51
HMGN3P1-201ENST00000453847 CFAP100Q494V2 611 aa5.64□□□□□ -1.51
HMGN3P1-201ENST00000453847 STYK1Q6J9G0 422 aa5.64□□□□□ -1.51
HMGN3P1-201ENST00000453847 CDPF1Q6NVV7 123 aa5.64□□□□□ -1.51
HMGN3P1-201ENST00000453847 ZCCHC8Q6NZY4 707 aaKnown RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms