RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 TRPC1P48995 793 aa11.91□□□□□ -0.5
LINC00342-202ENST00000448494 SLC7A5Q01650 507 aa11.91□□□□□ -0.5
LINC00342-202ENST00000448494 NCCRP1Q6ZVX7 275 aaPredicted RBP11.91□□□□□ -0.5
LINC00342-202ENST00000448494 GET4Q7L5D6 327 aaPredicted RBP11.91□□□□□ -0.5
LINC00342-202ENST00000448494 WDR66Q8TBY9 1149 aa11.91□□□□□ -0.5
LINC00342-202ENST00000448494 RBM33Q96EV2 1170 aaKnown RBP11.91□□□□□ -0.5
LINC00342-202ENST00000448494 C8orf76Q96K31 380 aa11.91□□□□□ -0.5
LINC00342-202ENST00000448494 TRAIPQ9BWF2 469 aa11.91□□□□□ -0.5
LINC00342-202ENST00000448494 C19orf44Q9H6X5 657 aa11.91□□□□□ -0.5
LINC00342-202ENST00000448494 DDX25Q9UHL0 483 aaKnown RBP11.91□□□□□ -0.5
LINC00342-202ENST00000448494 PREX1Q8TCU6 1659 aa11.91□□□□□ -0.5
LINC00342-202ENST00000448494 SPATA31D1Q6ZQQ2 1576 aa11.91□□□□□ -0.5
LINC00342-202ENST00000448494 E7ENQ6 273 aa11.91□□□□□ -0.5
LINC00342-202ENST00000448494 MAP3K13O43283 966 aa11.91□□□□□ -0.5
LINC00342-202ENST00000448494 BAG3O95817 575 aa11.91□□□□□ -0.5
LINC00342-202ENST00000448494 FECHP22830 423 aa11.91□□□□□ -0.5
LINC00342-202ENST00000448494 MAP3K12Q12852 859 aa11.91□□□□□ -0.5
LINC00342-202ENST00000448494 ITGB3BPQ13352 177 aaPredicted RBP11.91□□□□□ -0.5
LINC00342-202ENST00000448494 RRP36Q96EU6 259 aaKnown RBP11.91□□□□□ -0.5
LINC00342-202ENST00000448494 ATP6V1G3Q96LB4 118 aa11.91□□□□□ -0.5
LINC00342-202ENST00000448494 ZIM3Q96PE6 472 aa11.91□□□□□ -0.5
LINC00342-202ENST00000448494 MEIS3Q99687 375 aa11.91□□□□□ -0.5
LINC00342-202ENST00000448494 SYT15Q9BQS2 421 aa11.91□□□□□ -0.5
LINC00342-202ENST00000448494 FAM192AQ9GZU8 254 aa11.91□□□□□ -0.5
LINC00342-202ENST00000448494 TUBE1Q9UJT0 475 aa11.91□□□□□ -0.5
LINC00342-202ENST00000448494 SAR1BQ9Y6B6 198 aa11.91□□□□□ -0.5
LINC00342-202ENST00000448494 ZFYVE16Q7Z3T8 1539 aa11.9□□□□□ -0.5
LINC00342-202ENST00000448494 ZMYND10O75800 440 aa11.9□□□□□ -0.5
LINC00342-202ENST00000448494 TRIM37O94972 964 aa11.9□□□□□ -0.5
LINC00342-202ENST00000448494 KLC1Q07866 573 aa11.9□□□□□ -0.5
LINC00342-202ENST00000448494 POLA2Q14181 598 aa11.9□□□□□ -0.5
LINC00342-202ENST00000448494 USH1GQ495M9 461 aa11.9□□□□□ -0.5
LINC00342-202ENST00000448494 PAPD7Q5XG87 772 aaKnown RBP11.9□□□□□ -0.5
LINC00342-202ENST00000448494 MLKLQ8NB16 471 aa11.9□□□□□ -0.5
LINC00342-202ENST00000448494 LSM14AQ8ND56 463 aaKnown RBP11.9□□□□□ -0.5
LINC00342-202ENST00000448494 WHAMMQ8TF30 809 aa11.9□□□□□ -0.5
LINC00342-202ENST00000448494 RUFY2Q8WXA3 655 aa11.9□□□□□ -0.5
LINC00342-202ENST00000448494 CCDC51Q96ER9 411 aa11.9□□□□□ -0.5
LINC00342-202ENST00000448494 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.9□□□□□ -0.5
LINC00342-202ENST00000448494 GGNBP2Q9H3C7 697 aa11.9□□□□□ -0.5
LINC00342-202ENST00000448494 OCEL1Q9H607 264 aa11.9□□□□□ -0.5
LINC00342-202ENST00000448494 ABCF2Q9UG63 623 aa11.9□□□□□ -0.5
LINC00342-202ENST00000448494 TMED5Q9Y3A6 229 aa11.9□□□□□ -0.5
LINC00342-202ENST00000448494 SLC27A2O14975 620 aa11.9□□□□□ -0.51
LINC00342-202ENST00000448494 PFDN1O60925 122 aa11.9□□□□□ -0.51
LINC00342-202ENST00000448494 RAB11FIP3O75154 756 aa11.9□□□□□ -0.51
LINC00342-202ENST00000448494 WFS1O76024 890 aa11.9□□□□□ -0.51
LINC00342-202ENST00000448494 PAEPP09466 180 aa11.9□□□□□ -0.51
LINC00342-202ENST00000448494 BCRP11274 1271 aa11.9□□□□□ -0.51
LINC00342-202ENST00000448494 ALOX15P16050 662 aaPredicted RBP11.9□□□□□ -0.51
LINC00342-202ENST00000448494 TUBP50607 506 aa11.9□□□□□ -0.51
LINC00342-202ENST00000448494 NDUFA8P51970 172 aa11.9□□□□□ -0.51
LINC00342-202ENST00000448494 HNRNPMP52272 730 aaKnown RBP eCLIP11.9□□□□□ -0.51
LINC00342-202ENST00000448494 BPIFB4P59827 614 aa11.9□□□□□ -0.51
LINC00342-202ENST00000448494 TAF7Q15545 349 aaPredicted RBP11.9□□□□□ -0.51
LINC00342-202ENST00000448494 NUTM2DQ5VT03 806 aaPredicted RBP11.9□□□□□ -0.51
LINC00342-202ENST00000448494 KCTD16Q68DU8 428 aa11.9□□□□□ -0.51
LINC00342-202ENST00000448494 CACNA2D4Q7Z3S7 1137 aa11.9□□□□□ -0.51
LINC00342-202ENST00000448494 ARHGAP18Q8N392 663 aa11.9□□□□□ -0.51
LINC00342-202ENST00000448494 STAG2Q8N3U4 1231 aa11.9□□□□□ -0.51
LINC00342-202ENST00000448494 MMGT1Q8N4V1 131 aa11.9□□□□□ -0.51
LINC00342-202ENST00000448494 TSEN2Q8NCE0 465 aaKnown RBP11.9□□□□□ -0.51
LINC00342-202ENST00000448494 NSUN7Q8NE18 718 aaKnown RBP11.9□□□□□ -0.51
LINC00342-202ENST00000448494 ZNF653Q96CK0 615 aa11.9□□□□□ -0.51
LINC00342-202ENST00000448494 USP28Q96RU2 1077 aa11.9□□□□□ -0.51
LINC00342-202ENST00000448494 OXCT2Q9BYC2 517 aaPredicted RBP11.9□□□□□ -0.51
LINC00342-202ENST00000448494 PPANQ9NQ55 473 aaKnown RBP11.9□□□□□ -0.51
LINC00342-202ENST00000448494 TUBA8Q9NY65 449 aaPredicted RBP11.9□□□□□ -0.51
LINC00342-202ENST00000448494 FRMD4BQ9Y2L6 1034 aa11.9□□□□□ -0.51
LINC00342-202ENST00000448494 A0A0U1RQJ8 604 aa11.89□□□□□ -0.51
LINC00342-202ENST00000448494 IFIT3O14879 490 aaKnown RBP11.89□□□□□ -0.51
LINC00342-202ENST00000448494 MYBL1P10243 752 aa11.89□□□□□ -0.51
LINC00342-202ENST00000448494 ATP6V1C1P21283 382 aa11.89□□□□□ -0.51
LINC00342-202ENST00000448494 HDAC4P56524 1084 aa11.89□□□□□ -0.51
LINC00342-202ENST00000448494 ITIH3Q06033 890 aa11.89□□□□□ -0.51
LINC00342-202ENST00000448494 KRT24Q2M2I5 525 aa11.89□□□□□ -0.51
LINC00342-202ENST00000448494 OLFM4Q6UX06 510 aa11.89□□□□□ -0.51
LINC00342-202ENST00000448494 IQCKQ8N0W5 287 aa11.89□□□□□ -0.51
LINC00342-202ENST00000448494 CNTROBQ8N137 903 aa11.89□□□□□ -0.51
LINC00342-202ENST00000448494 PCDHA7Q9UN72 937 aa11.89□□□□□ -0.51
LINC00342-202ENST00000448494 NEURL4Q96JN8 1562 aa11.89□□□□□ -0.51
LINC00342-202ENST00000448494 PLCH2O75038 1416 aa11.89□□□□□ -0.51
LINC00342-202ENST00000448494 ATP2C2O75185 946 aa11.89□□□□□ -0.51
LINC00342-202ENST00000448494 CAPN15O75808 1086 aa11.89□□□□□ -0.51
LINC00342-202ENST00000448494 OXCT1P55809 520 aa11.89□□□□□ -0.51
LINC00342-202ENST00000448494 QPCTQ16769 361 aa11.89□□□□□ -0.51
LINC00342-202ENST00000448494 OR52E8Q6IFG1 317 aa11.89□□□□□ -0.51
LINC00342-202ENST00000448494 TMEM154Q6P9G4 183 aa11.89□□□□□ -0.51
LINC00342-202ENST00000448494 LRRC43Q8N309 656 aa11.89□□□□□ -0.51
LINC00342-202ENST00000448494 RSPH1Q8WYR4 309 aa11.89□□□□□ -0.51
LINC00342-202ENST00000448494 NCSTNQ92542 709 aa11.89□□□□□ -0.51
LINC00342-202ENST00000448494 FTOQ9C0B1 505 aaKnown RBP eCLIP11.89□□□□□ -0.51
LINC00342-202ENST00000448494 SH3GLB1Q9Y371 365 aa11.89□□□□□ -0.51
LINC00342-202ENST00000448494 DAAM1Q9Y4D1 1078 aa11.89□□□□□ -0.51
LINC00342-202ENST00000448494 PNPLA6Q8IY17 1366 aa11.88□□□□□ -0.51
LINC00342-202ENST00000448494 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.88□□□□□ -0.51
LINC00342-202ENST00000448494 GFPT2O94808 682 aa11.88□□□□□ -0.51
LINC00342-202ENST00000448494 UPP2O95045 317 aa11.88□□□□□ -0.51
LINC00342-202ENST00000448494 NQO1P15559 274 aaKnown RBP11.88□□□□□ -0.51
LINC00342-202ENST00000448494 PAK2Q13177 524 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms