RNA–Protein interactions for RNA: ENST00000445654.2

SHANK2-209, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 522 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-209ENST00000445654 MAMDC4Q6UXC1 1216 aa16.87■□□□□ 0.29
SHANK2-209ENST00000445654 FAM126BQ8IXS8 530 aa16.87■□□□□ 0.29
SHANK2-209ENST00000445654 MICALL1Q8N3F8 863 aa16.87■□□□□ 0.29
SHANK2-209ENST00000445654 CDCA7LQ96GN5 454 aa16.87■□□□□ 0.29
SHANK2-209ENST00000445654 CCDC17Q96LX7 622 aa16.87■□□□□ 0.29
SHANK2-209ENST00000445654 ZHX1Q9UKY1 873 aaPredicted RBP16.87■□□□□ 0.29
SHANK2-209ENST00000445654 SLC4A7Q9Y6M7 1214 aa16.87■□□□□ 0.29
SHANK2-209ENST00000445654 TCF20Q9UGU0 1960 aaKnown RBP16.86■□□□□ 0.29
SHANK2-209ENST00000445654 CABYRO75952 493 aa16.86■□□□□ 0.29
SHANK2-209ENST00000445654 GJA9P57773 515 aa16.86■□□□□ 0.29
SHANK2-209ENST00000445654 GNASQ5JWF2 1037 aa16.86■□□□□ 0.29
SHANK2-209ENST00000445654 SPICE1Q8N0Z3 855 aa16.86■□□□□ 0.29
SHANK2-209ENST00000445654 NECAB3Q96P71 396 aaPredicted RBP16.86■□□□□ 0.29
SHANK2-209ENST00000445654 UPF3AQ9H1J1 476 aaKnown RBP16.86■□□□□ 0.29
SHANK2-209ENST00000445654 ABHD16BQ9H3Z7 469 aa16.86■□□□□ 0.29
SHANK2-209ENST00000445654 GOPCQ9HD26 462 aa16.86■□□□□ 0.29
SHANK2-209ENST00000445654 COL11A1P12107 1806 aaPredicted RBP16.86■□□□□ 0.29
SHANK2-209ENST00000445654 MYH8P13535 1937 aa16.86■□□□□ 0.29
SHANK2-209ENST00000445654 GBF1Q92538 1859 aa16.85■□□□□ 0.29
SHANK2-209ENST00000445654 VWA5AO00534 786 aa16.85■□□□□ 0.29
SHANK2-209ENST00000445654 GPR37L1O60883 481 aa16.85■□□□□ 0.29
SHANK2-209ENST00000445654 ACVR2BQ13705 512 aa16.85■□□□□ 0.29
SHANK2-209ENST00000445654 TTF1Q15361 905 aaPredicted RBP16.85■□□□□ 0.29
SHANK2-209ENST00000445654 AMOTL1Q8IY63 956 aa16.85■□□□□ 0.29
SHANK2-209ENST00000445654 LENG1Q96BZ8 264 aaPredicted RBP16.85■□□□□ 0.29
SHANK2-209ENST00000445654 RIOK1Q9BRS2 568 aaKnown RBP16.85■□□□□ 0.29
SHANK2-209ENST00000445654 HIPK3Q9H422 1215 aa16.85■□□□□ 0.29
SHANK2-209ENST00000445654 ZNF214Q9UL59 606 aaPredicted RBP16.85■□□□□ 0.29
SHANK2-209ENST00000445654 PPP1R9AQ9ULJ8 1098 aa16.85■□□□□ 0.29
SHANK2-209ENST00000445654 YBX2Q9Y2T7 364 aaKnown RBP16.85■□□□□ 0.29
SHANK2-209ENST00000445654 CD4P01730 458 aa16.84■□□□□ 0.29
SHANK2-209ENST00000445654 PFKMP08237 780 aa16.84■□□□□ 0.29
SHANK2-209ENST00000445654 CYP2C18P33260 490 aa16.84■□□□□ 0.29
SHANK2-209ENST00000445654 KIAA1755Q5JYT7 1200 aa16.84■□□□□ 0.29
SHANK2-209ENST00000445654 TEX13BQ9BXU2 312 aa16.84■□□□□ 0.29
SHANK2-209ENST00000445654 DBNLQ9UJU6 430 aaKnown RBP16.84■□□□□ 0.29
SHANK2-209ENST00000445654 SURF6O75683 361 aaKnown RBP16.83■□□□□ 0.28
SHANK2-209ENST00000445654 SNAI1O95863 264 aaPredicted RBP16.83■□□□□ 0.28
SHANK2-209ENST00000445654 KCNQ1P51787 676 aa16.83■□□□□ 0.28
SHANK2-209ENST00000445654 NKX3-2P78367 333 aa16.83■□□□□ 0.28
SHANK2-209ENST00000445654 TFF2Q03403 129 aa16.83■□□□□ 0.28
SHANK2-209ENST00000445654 POLA2Q14181 598 aa16.83■□□□□ 0.28
SHANK2-209ENST00000445654 OTOP2Q7RTS6 562 aa16.83■□□□□ 0.28
SHANK2-209ENST00000445654 TRMT2AQ8IZ69 625 aaKnown RBP16.83■□□□□ 0.28
SHANK2-209ENST00000445654 EPHX3Q9H6B9 360 aa16.83■□□□□ 0.28
SHANK2-209ENST00000445654 KANSL2Q9H9L4 492 aa16.82■□□□□ 0.28
SHANK2-209ENST00000445654 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.82■□□□□ 0.28
SHANK2-209ENST00000445654 CTDP1Q9Y5B0 961 aaPredicted RBP16.82■□□□□ 0.28
SHANK2-209ENST00000445654 DNAJC25-GNG10A0A024R161 153 aa16.81■□□□□ 0.28
SHANK2-209ENST00000445654 MYADML2A6NDP7 307 aa16.81■□□□□ 0.28
SHANK2-209ENST00000445654 ZBBXA8MT70 800 aa16.81■□□□□ 0.28
SHANK2-209ENST00000445654 ZEB2O60315 1214 aa16.81■□□□□ 0.28
SHANK2-209ENST00000445654 ATP2A2P16615 1042 aaKnown RBP16.81■□□□□ 0.28
SHANK2-209ENST00000445654 CCDC144BQ3MJ40 725 aa16.81■□□□□ 0.28
SHANK2-209ENST00000445654 TMEM67Q5HYA8 995 aa16.81■□□□□ 0.28
SHANK2-209ENST00000445654 SLC43A3Q8NBI5 491 aa16.81■□□□□ 0.28
SHANK2-209ENST00000445654 SSH3Q8TE77 659 aa16.81■□□□□ 0.28
SHANK2-209ENST00000445654 HLA-CQ95604 372 aa16.81■□□□□ 0.28
SHANK2-209ENST00000445654 FBXO40Q9UH90 709 aa16.81■□□□□ 0.28
SHANK2-209ENST00000445654 MTCH2Q9Y6C9 303 aa16.81■□□□□ 0.28
SHANK2-209ENST00000445654 LRRC37A2A6NM11 1700 aa16.8■□□□□ 0.28
SHANK2-209ENST00000445654 TLL1O43897 1013 aa16.8■□□□□ 0.28
SHANK2-209ENST00000445654 ACTN1P12814 892 aa16.8■□□□□ 0.28
SHANK2-209ENST00000445654 AKR1B1P15121 316 aa16.8■□□□□ 0.28
SHANK2-209ENST00000445654 RARSP54136 660 aaKnown RBP16.8■□□□□ 0.28
SHANK2-209ENST00000445654 SNRNP48Q6IEG0 339 aaKnown RBP16.8■□□□□ 0.28
SHANK2-209ENST00000445654 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.8■□□□□ 0.28
SHANK2-209ENST00000445654 SIAH1Q8IUQ4 282 aa16.8■□□□□ 0.28
SHANK2-209ENST00000445654 REPS2Q8NFH8 660 aa16.8■□□□□ 0.28
SHANK2-209ENST00000445654 DDRGK1Q96HY6 314 aa16.8■□□□□ 0.28
SHANK2-209ENST00000445654 CCDC8Q9H0W5 538 aaPredicted RBP16.8■□□□□ 0.28
SHANK2-209ENST00000445654 DCP1AQ9NPI6 582 aaPredicted RBP16.8■□□□□ 0.28
SHANK2-209ENST00000445654 ATP8A2Q9NTI2 1148 aa16.8■□□□□ 0.28
SHANK2-209ENST00000445654 FBXO28Q9NVF7 368 aa16.8■□□□□ 0.28
SHANK2-209ENST00000445654 NOP58Q9Y2X3 529 aaKnown RBP16.8■□□□□ 0.28
SHANK2-209ENST00000445654 CHD7Q9P2D1 2997 aa16.8■□□□□ 0.28
SHANK2-209ENST00000445654 ATP2A1O14983 1001 aa16.79■□□□□ 0.28
SHANK2-209ENST00000445654 EEF2P13639 858 aaKnown RBP16.79■□□□□ 0.28
SHANK2-209ENST00000445654 ATP8B2P98198 1209 aa16.79■□□□□ 0.28
SHANK2-209ENST00000445654 SLC9C2Q5TAH2 1124 aa16.79■□□□□ 0.28
SHANK2-209ENST00000445654 ANKRD35Q8N283 1001 aa16.79■□□□□ 0.28
SHANK2-209ENST00000445654 SLF1Q9BQI6 1058 aa16.79■□□□□ 0.28
SHANK2-209ENST00000445654 RAD21O60216 631 aa16.78■□□□□ 0.28
SHANK2-209ENST00000445654 ZBED4O75132 1171 aa16.78■□□□□ 0.28
SHANK2-209ENST00000445654 RABGGTBP53611 331 aa16.78■□□□□ 0.28
SHANK2-209ENST00000445654 CCL23P55773 120 aa16.78■□□□□ 0.28
SHANK2-209ENST00000445654 ITGA7Q13683 1181 aa16.78■□□□□ 0.28
SHANK2-209ENST00000445654 FAM83BQ5T0W9 1011 aa16.78■□□□□ 0.28
SHANK2-209ENST00000445654 ERC1Q8IUD2 1116 aa16.78■□□□□ 0.28
SHANK2-209ENST00000445654 PRPF38AQ8NAV1 312 aaKnown RBP16.78■□□□□ 0.28
SHANK2-209ENST00000445654 SLC9A7Q96T83 725 aa16.78■□□□□ 0.28
SHANK2-209ENST00000445654 NOC4LQ9BVI4 516 aaKnown RBP16.78■□□□□ 0.28
SHANK2-209ENST00000445654 AP5M1Q9H0R1 490 aa16.78■□□□□ 0.28
SHANK2-209ENST00000445654 ANTXR1Q9H6X2 564 aa16.78■□□□□ 0.28
SHANK2-209ENST00000445654 TRANK1O15050 2925 aa16.78■□□□□ 0.28
SHANK2-209ENST00000445654 XIRP2A4UGR9 3374 aa16.77■□□□□ 0.28
SHANK2-209ENST00000445654 KIF28PB7ZC32 967 aa16.77■□□□□ 0.28
SHANK2-209ENST00000445654 PI4K2BG5E9Z4 385 aa16.77■□□□□ 0.28
SHANK2-209ENST00000445654 SUPT20HL2P0C7V6 817 aa16.77■□□□□ 0.28
SHANK2-209ENST00000445654 TNFAIP2Q03169 654 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms