RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 KIAA1755Q5JYT7 1200 aa14.34□□□□□ -0.11
LTBR-204ENST00000444814 PNMA1Q8ND90 353 aa14.34□□□□□ -0.11
LTBR-204ENST00000444814 PXYLP1Q8TE99 480 aa14.34□□□□□ -0.11
LTBR-204ENST00000444814 TMEM87BQ96K49 555 aa14.34□□□□□ -0.11
LTBR-204ENST00000444814 TEX13BQ9BXU2 312 aa14.34□□□□□ -0.11
LTBR-204ENST00000444814 ARHGAP39Q9C0H5 1083 aa14.34□□□□□ -0.11
LTBR-204ENST00000444814 FBXO40Q9UH90 709 aa14.34□□□□□ -0.11
LTBR-204ENST00000444814 MTMR7Q9Y216 660 aa14.34□□□□□ -0.11
LTBR-204ENST00000444814 SLC15A5A6NIM6 579 aa14.34□□□□□ -0.11
LTBR-204ENST00000444814 CAPN2P17655 700 aa14.34□□□□□ -0.11
LTBR-204ENST00000444814 GRK4P32298 578 aa14.34□□□□□ -0.11
LTBR-204ENST00000444814 STAT3P40763 770 aa14.34□□□□□ -0.11
LTBR-204ENST00000444814 WTAPQ15007 396 aa14.34□□□□□ -0.11
LTBR-204ENST00000444814 NECTIN1Q15223 517 aa14.34□□□□□ -0.11
LTBR-204ENST00000444814 ASPRV1Q53RT3 343 aa14.34□□□□□ -0.11
LTBR-204ENST00000444814 GPR142Q7Z601 462 aa14.34□□□□□ -0.11
LTBR-204ENST00000444814 NCAPG2Q86XI2 1143 aa14.34□□□□□ -0.11
LTBR-204ENST00000444814 ABRAQ8N0Z2 381 aa14.34□□□□□ -0.11
LTBR-204ENST00000444814 NUP88Q99567 741 aaPredicted RBP14.34□□□□□ -0.11
LTBR-204ENST00000444814 ZKSCAN3Q9BRR0 538 aa14.34□□□□□ -0.11
LTBR-204ENST00000444814 TMEM106CQ9BVX2 250 aa14.34□□□□□ -0.11
LTBR-204ENST00000444814 TXNRD2Q9NNW7 524 aa14.34□□□□□ -0.11
LTBR-204ENST00000444814 ADAMTS5Q9UNA0 930 aa14.34□□□□□ -0.11
LTBR-204ENST00000444814 PTCH2Q9Y6C5 1203 aa14.34□□□□□ -0.11
LTBR-204ENST00000444814 CCDC85CA6NKD9 419 aa14.33□□□□□ -0.12
LTBR-204ENST00000444814 ATP2A1O14983 1001 aa14.33□□□□□ -0.12
LTBR-204ENST00000444814 ECM2O94769 699 aaPredicted RBP14.33□□□□□ -0.12
LTBR-204ENST00000444814 FCER1AP12319 257 aa14.33□□□□□ -0.12
LTBR-204ENST00000444814 PSMA5P28066 241 aa14.33□□□□□ -0.12
LTBR-204ENST00000444814 FLT3LGP49771 235 aa14.33□□□□□ -0.12
LTBR-204ENST00000444814 PRKCZQ05513 592 aa14.33□□□□□ -0.12
LTBR-204ENST00000444814 TRAF1Q13077 416 aa14.33□□□□□ -0.12
LTBR-204ENST00000444814 TKFCQ3LXA3 575 aa14.33□□□□□ -0.12
LTBR-204ENST00000444814 TMEM67Q5HYA8 995 aa14.33□□□□□ -0.12
LTBR-204ENST00000444814 SYNE3Q6ZMZ3 975 aa14.33□□□□□ -0.12
LTBR-204ENST00000444814 CATIPQ7Z7H3 387 aa14.33□□□□□ -0.12
LTBR-204ENST00000444814 RIOX2Q8IUF8 465 aa14.33□□□□□ -0.12
LTBR-204ENST00000444814 PIP4P2Q8N4L2 257 aa14.33□□□□□ -0.12
LTBR-204ENST00000444814 MOV10L1Q9BXT6 1211 aaKnown RBP14.33□□□□□ -0.12
LTBR-204ENST00000444814 BTBD7Q9P203 1132 aa14.33□□□□□ -0.12
LTBR-204ENST00000444814 TACC3Q9Y6A5 838 aa14.33□□□□□ -0.12
LTBR-204ENST00000444814 ADCY3O60266 1144 aa14.32□□□□□ -0.12
LTBR-204ENST00000444814 PARP1P09874 1014 aaKnown RBP14.32□□□□□ -0.12
LTBR-204ENST00000444814 PDHBP11177 359 aa14.32□□□□□ -0.12
LTBR-204ENST00000444814 XRCC5P13010 732 aaKnown RBP14.32□□□□□ -0.12
LTBR-204ENST00000444814 KCTD2Q14681 263 aa14.32□□□□□ -0.12
LTBR-204ENST00000444814 NFXL1Q6ZNB6 911 aa14.32□□□□□ -0.12
LTBR-204ENST00000444814 KCTD1Q719H9 257 aa14.32□□□□□ -0.12
LTBR-204ENST00000444814 ENAHQ8N8S7 591 aaPredicted RBP14.32□□□□□ -0.12
LTBR-204ENST00000444814 ARMC5Q96C12 935 aa14.32□□□□□ -0.12
LTBR-204ENST00000444814 NEK1Q96PY6 1258 aa14.32□□□□□ -0.12
LTBR-204ENST00000444814 APBA2Q99767 749 aa14.32□□□□□ -0.12
LTBR-204ENST00000444814 FBXO28Q9NVF7 368 aa14.32□□□□□ -0.12
LTBR-204ENST00000444814 WDR19Q8NEZ3 1342 aa14.32□□□□□ -0.12
LTBR-204ENST00000444814 CCDC69A6NI79 296 aa14.31□□□□□ -0.12
LTBR-204ENST00000444814 CNMDO75829 334 aa14.31□□□□□ -0.12
LTBR-204ENST00000444814 CALM1P0DP23 149 aa14.31□□□□□ -0.12
LTBR-204ENST00000444814 CALM2P0DP24 149 aa14.31□□□□□ -0.12
LTBR-204ENST00000444814 CALM3P0DP25 149 aa14.31□□□□□ -0.12
LTBR-204ENST00000444814 ERCC3P19447 782 aa14.31□□□□□ -0.12
LTBR-204ENST00000444814 PTPREP23469 700 aa14.31□□□□□ -0.12
LTBR-204ENST00000444814 KIF5BP33176 963 aa14.31□□□□□ -0.12
LTBR-204ENST00000444814 FGD1P98174 961 aa14.31□□□□□ -0.12
LTBR-204ENST00000444814 ZNF543Q08ER8 600 aa14.31□□□□□ -0.12
LTBR-204ENST00000444814 Q3C1V9 767 aa14.31□□□□□ -0.12
LTBR-204ENST00000444814 TSGA10IPQ3SY00 556 aa14.31□□□□□ -0.12
LTBR-204ENST00000444814 SYDE2Q5VT97 1194 aa14.31□□□□□ -0.12
LTBR-204ENST00000444814 SNRNP48Q6IEG0 339 aaKnown RBP14.31□□□□□ -0.12
LTBR-204ENST00000444814 BTNL9Q6UXG8 535 aa14.31□□□□□ -0.12
LTBR-204ENST00000444814 DPP9Q86TI2 863 aa14.31□□□□□ -0.12
LTBR-204ENST00000444814 CHST13Q8NET6 341 aa14.31□□□□□ -0.12
LTBR-204ENST00000444814 SLC38A10Q9HBR0 1119 aa14.31□□□□□ -0.12
LTBR-204ENST00000444814 MYH4Q9Y623 1939 aa14.31□□□□□ -0.12
LTBR-204ENST00000444814 PRC1O43663 620 aa14.3□□□□□ -0.12
LTBR-204ENST00000444814 DHX16O60231 1041 aaKnown RBP14.3□□□□□ -0.12
LTBR-204ENST00000444814 SNHG28P0DPA3 235 aa14.3□□□□□ -0.12
LTBR-204ENST00000444814 MAP2K5Q13163 448 aa14.3□□□□□ -0.12
LTBR-204ENST00000444814 TMEM132BQ14DG7 1078 aa14.3□□□□□ -0.12
LTBR-204ENST00000444814 CPXCR1Q8N123 301 aa14.3□□□□□ -0.12
LTBR-204ENST00000444814 MMP19Q99542 508 aa14.3□□□□□ -0.12
LTBR-204ENST00000444814 PORCNQ9H237 461 aa14.3□□□□□ -0.12
LTBR-204ENST00000444814 GPCPD1Q9NPB8 672 aa14.3□□□□□ -0.12
LTBR-204ENST00000444814 HMGCRP04035 888 aa14.3□□□□□ -0.12
LTBR-204ENST00000444814 GNAQP50148 359 aa14.3□□□□□ -0.12
LTBR-204ENST00000444814 MFSD14CQ5VZR4 134 aa14.3□□□□□ -0.12
LTBR-204ENST00000444814 MB21D2Q8IYB1 491 aaPredicted RBP14.3□□□□□ -0.12
LTBR-204ENST00000444814 CTCFLQ8NI51 663 aaPredicted RBP14.3□□□□□ -0.12
LTBR-204ENST00000444814 NKX2-3Q8TAU0 364 aa14.3□□□□□ -0.12
LTBR-204ENST00000444814 DDX11Q96FC9 970 aa14.3□□□□□ -0.12
LTBR-204ENST00000444814 ZNF214Q9UL59 606 aaPredicted RBP14.3□□□□□ -0.12
LTBR-204ENST00000444814 PRR12Q9ULL5 1215 aa14.3□□□□□ -0.12
LTBR-204ENST00000444814 DDAH1O94760 285 aa14.29□□□□□ -0.12
LTBR-204ENST00000444814 CYP2B6P20813 491 aa14.29□□□□□ -0.12
LTBR-204ENST00000444814 CTGFP29279 349 aa14.29□□□□□ -0.12
LTBR-204ENST00000444814 HSPA4P34932 840 aa14.29□□□□□ -0.12
LTBR-204ENST00000444814 GRB14Q14449 540 aa14.29□□□□□ -0.12
LTBR-204ENST00000444814 SEC23AQ15436 765 aa14.29□□□□□ -0.12
LTBR-204ENST00000444814 MORN1Q5T089 497 aa14.29□□□□□ -0.12
LTBR-204ENST00000444814 IFFO2Q5TF58 517 aa14.29□□□□□ -0.12
LTBR-204ENST00000444814 CYB5R4Q7L1T6 521 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms