RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 INCENPQ9NQS7 918 aa15.83■□□□□ 0.13
SMARCA4-204ENST00000444061 FBXO40Q9UH90 709 aa15.83■□□□□ 0.13
SMARCA4-204ENST00000444061 PUF60Q9UHX1 559 aaKnown RBP15.83■□□□□ 0.13
SMARCA4-204ENST00000444061 PNMA6FA0A0J9YX94 578 aa15.83■□□□□ 0.12
SMARCA4-204ENST00000444061 VEGFAP15692 232 aaPredicted RBP15.83■□□□□ 0.12
SMARCA4-204ENST00000444061 SSR1P43307 286 aaKnown RBP15.83■□□□□ 0.12
SMARCA4-204ENST00000444061 UBXN2AP68543 259 aa15.83■□□□□ 0.12
SMARCA4-204ENST00000444061 SPA17Q15506 151 aa15.83■□□□□ 0.12
SMARCA4-204ENST00000444061 SPECC1Q5M775 1068 aa15.83■□□□□ 0.12
SMARCA4-204ENST00000444061 KIAA1328Q86T90 577 aa15.83■□□□□ 0.12
SMARCA4-204ENST00000444061 AP5M1Q9H0R1 490 aa15.83■□□□□ 0.12
SMARCA4-204ENST00000444061 FEM1BQ9UK73 627 aa15.83■□□□□ 0.12
SMARCA4-204ENST00000444061 SLIT2O94813 1529 aa15.83■□□□□ 0.12
SMARCA4-204ENST00000444061 GPR75-ASB3A0A0A6YYF3 556 aa15.83■□□□□ 0.12
SMARCA4-204ENST00000444061 HARSP12081 509 aaKnown RBP15.83■□□□□ 0.12
SMARCA4-204ENST00000444061 MAP3K9P80192 1104 aa15.83■□□□□ 0.12
SMARCA4-204ENST00000444061 TXNRD3Q86VQ6 643 aa15.83■□□□□ 0.12
SMARCA4-204ENST00000444061 CPLX3Q8WVH0 158 aa15.83■□□□□ 0.12
SMARCA4-204ENST00000444061 ZHX1Q9UKY1 873 aaPredicted RBP15.83■□□□□ 0.12
SMARCA4-204ENST00000444061 SORBS3O60504 671 aa15.83■□□□□ 0.12
SMARCA4-204ENST00000444061 YEATS4O95619 227 aa15.83■□□□□ 0.12
SMARCA4-204ENST00000444061 RPL13P26373 211 aaKnown RBP15.83■□□□□ 0.12
SMARCA4-204ENST00000444061 CASP7P55210 303 aa15.83■□□□□ 0.12
SMARCA4-204ENST00000444061 RCSD1Q6JBY9 416 aa15.83■□□□□ 0.12
SMARCA4-204ENST00000444061 BCL2L12Q9HB09 334 aa15.83■□□□□ 0.12
SMARCA4-204ENST00000444061 ORC4O43929 436 aa15.82■□□□□ 0.12
SMARCA4-204ENST00000444061 OR52Z1P0C646 297 aa15.82■□□□□ 0.12
SMARCA4-204ENST00000444061 EPHX2P34913 555 aa15.82■□□□□ 0.12
SMARCA4-204ENST00000444061 STRN3Q13033 797 aa15.82■□□□□ 0.12
SMARCA4-204ENST00000444061 PCDHA4Q9UN74 947 aa15.82■□□□□ 0.12
SMARCA4-204ENST00000444061 POLR2DO15514 142 aaKnown RBP15.82■□□□□ 0.12
SMARCA4-204ENST00000444061 ZNF157P51786 506 aaPredicted RBP15.82■□□□□ 0.12
SMARCA4-204ENST00000444061 HUNKP57058 714 aa15.82■□□□□ 0.12
SMARCA4-204ENST00000444061 MTA3Q9BTC8 594 aa15.82■□□□□ 0.12
SMARCA4-204ENST00000444061 MMP14P50281 582 aa15.82■□□□□ 0.12
SMARCA4-204ENST00000444061 RBM46Q8TBY0 533 aaKnown RBP15.82■□□□□ 0.12
SMARCA4-204ENST00000444061 RTEL1Q9NZ71 1219 aa15.82■□□□□ 0.12
SMARCA4-204ENST00000444061 PRPF3O43395 683 aaKnown RBP15.82■□□□□ 0.12
SMARCA4-204ENST00000444061 CDHR1Q96JP9 859 aa15.82■□□□□ 0.12
SMARCA4-204ENST00000444061 VPS33BQ9H267 617 aa15.82■□□□□ 0.12
SMARCA4-204ENST00000444061 HMGCS2P54868 508 aa15.81■□□□□ 0.12
SMARCA4-204ENST00000444061 UTP14CQ5TAP6 766 aaKnown RBP15.81■□□□□ 0.12
SMARCA4-204ENST00000444061 LEO1Q8WVC0 666 aaPredicted RBP15.81■□□□□ 0.12
SMARCA4-204ENST00000444061 UBE2Q2Q8WVN8 375 aa15.81■□□□□ 0.12
SMARCA4-204ENST00000444061 TMEM39BQ9GZU3 492 aa15.81■□□□□ 0.12
SMARCA4-204ENST00000444061 DDNO94850 711 aaPredicted RBP15.81■□□□□ 0.12
SMARCA4-204ENST00000444061 SEPT14Q6ZU15 432 aa15.81■□□□□ 0.12
SMARCA4-204ENST00000444061 KCNG1Q9UIX4 513 aa15.81■□□□□ 0.12
SMARCA4-204ENST00000444061 RABGAP1Q9Y3P9 1069 aa15.81■□□□□ 0.12
SMARCA4-204ENST00000444061 KDM3AQ9Y4C1 1321 aa15.81■□□□□ 0.12
SMARCA4-204ENST00000444061 BCL9LQ86UU0 1499 aa15.81■□□□□ 0.12
SMARCA4-204ENST00000444061 NMT2O60551 498 aa15.81■□□□□ 0.12
SMARCA4-204ENST00000444061 CELF2O95319 508 aaKnown RBP15.81■□□□□ 0.12
SMARCA4-204ENST00000444061 ENAHQ8N8S7 591 aaPredicted RBP15.81■□□□□ 0.12
SMARCA4-204ENST00000444061 NSUN7Q8NE18 718 aaKnown RBP15.81■□□□□ 0.12
SMARCA4-204ENST00000444061 SPAG5Q96R06 1193 aa15.81■□□□□ 0.12
SMARCA4-204ENST00000444061 CAMKK2Q96RR4 588 aa15.81■□□□□ 0.12
SMARCA4-204ENST00000444061 SCAF8Q9UPN6 1271 aaKnown RBP15.81■□□□□ 0.12
SMARCA4-204ENST00000444061 EXOC7Q9UPT5 735 aa15.81■□□□□ 0.12
SMARCA4-204ENST00000444061 PPP1R2P41236 205 aa15.8■□□□□ 0.12
SMARCA4-204ENST00000444061 SBK1Q52WX2 424 aa15.8■□□□□ 0.12
SMARCA4-204ENST00000444061 HERC4Q5GLZ8 1057 aaPredicted RBP15.8■□□□□ 0.12
SMARCA4-204ENST00000444061 PRPF38AQ8NAV1 312 aaKnown RBP15.8■□□□□ 0.12
SMARCA4-204ENST00000444061 PODXL2Q9NZ53 605 aa15.8■□□□□ 0.12
SMARCA4-204ENST00000444061 FGFR2P21802 821 aa15.8■□□□□ 0.12
SMARCA4-204ENST00000444061 SNAP25P60880 206 aa15.8■□□□□ 0.12
SMARCA4-204ENST00000444061 RASGRP4Q8TDF6 673 aa15.8■□□□□ 0.12
SMARCA4-204ENST00000444061 TRIM6Q9C030 488 aaPredicted RBP15.8■□□□□ 0.12
SMARCA4-204ENST00000444061 TECP42680 631 aa15.8■□□□□ 0.12
SMARCA4-204ENST00000444061 CDAN1Q8IWY9 1227 aa15.8■□□□□ 0.12
SMARCA4-204ENST00000444061 ARHGAP29Q52LW3 1261 aa15.8■□□□□ 0.12
SMARCA4-204ENST00000444061 CNNM4Q6P4Q7 775 aa15.8■□□□□ 0.12
SMARCA4-204ENST00000444061 RNF207Q6ZRF8 634 aa15.8■□□□□ 0.12
SMARCA4-204ENST00000444061 EEPD1Q7L9B9 569 aa15.8■□□□□ 0.12
SMARCA4-204ENST00000444061 PRMT6Q96LA8 375 aaPredicted RBP15.8■□□□□ 0.12
SMARCA4-204ENST00000444061 USP17L15C9J2P7 530 aa15.79■□□□□ 0.12
SMARCA4-204ENST00000444061 USP17L13C9JLJ4 530 aa15.79■□□□□ 0.12
SMARCA4-204ENST00000444061 USP17L11C9JVI0 530 aa15.79■□□□□ 0.12
SMARCA4-204ENST00000444061 USP17L18D6R9N7 530 aa15.79■□□□□ 0.12
SMARCA4-204ENST00000444061 USP17L22D6RA61 530 aa15.79■□□□□ 0.12
SMARCA4-204ENST00000444061 USP17L17D6RBQ6 530 aa15.79■□□□□ 0.12
SMARCA4-204ENST00000444061 USP17L19D6RCP7 530 aa15.79■□□□□ 0.12
SMARCA4-204ENST00000444061 USP17L20D6RJB6 530 aa15.79■□□□□ 0.12
SMARCA4-204ENST00000444061 STX17P56962 302 aa15.79■□□□□ 0.12
SMARCA4-204ENST00000444061 USP17L24Q0WX57 530 aa15.79■□□□□ 0.12
SMARCA4-204ENST00000444061 HSP90AA4PQ58FG1 418 aa15.79■□□□□ 0.12
SMARCA4-204ENST00000444061 SNRNP48Q6IEG0 339 aaKnown RBP15.79■□□□□ 0.12
SMARCA4-204ENST00000444061 METTL13Q8N6R0 699 aa15.79■□□□□ 0.12
SMARCA4-204ENST00000444061 CTAGE1Q96RT6 745 aa15.79■□□□□ 0.12
SMARCA4-204ENST00000444061 FDX1P10109 184 aa15.79■□□□□ 0.12
SMARCA4-204ENST00000444061 CCND2P30279 289 aa15.79■□□□□ 0.12
SMARCA4-204ENST00000444061 ANO6Q4KMQ2 910 aa15.79■□□□□ 0.12
SMARCA4-204ENST00000444061 FAM160B1Q5W0V3 765 aa15.79■□□□□ 0.12
SMARCA4-204ENST00000444061 PSMD1Q99460 953 aa15.79■□□□□ 0.12
SMARCA4-204ENST00000444061 RAVER2Q9HCJ3 691 aaKnown RBP15.79■□□□□ 0.12
SMARCA4-204ENST00000444061 ATRNO75882 1429 aa15.79■□□□□ 0.12
SMARCA4-204ENST00000444061 ONECUT3O60422 494 aaPredicted RBP15.79■□□□□ 0.12
SMARCA4-204ENST00000444061 PPP4CP60510 307 aa15.79■□□□□ 0.12
SMARCA4-204ENST00000444061 CCDC181Q5TID7 509 aa15.79■□□□□ 0.12
SMARCA4-204ENST00000444061 TMTC3Q6ZXV5 915 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms