RNA–Protein interactions for RNA: ENST00000443896.5

PIKFYVE-206, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best)

Gene PIKFYVE, Length 3,282 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-206ENST00000443896 ARL6IP4Q66PJ3 421 aaKnown RBP18.42■□□□□ 0.54
PIKFYVE-206ENST00000443896 TYW1BQ6NUM6 668 aa18.42■□□□□ 0.54
PIKFYVE-206ENST00000443896 SLF2Q8IX21 1173 aa18.42■□□□□ 0.54
PIKFYVE-206ENST00000443896 GSDMAQ96QA5 445 aa18.42■□□□□ 0.54
PIKFYVE-206ENST00000443896 E2F4Q16254 413 aa18.42■□□□□ 0.54
PIKFYVE-206ENST00000443896 C4orf32Q8N8J7 132 aa18.42■□□□□ 0.54
PIKFYVE-206ENST00000443896 DAGLBQ8NCG7 672 aa18.42■□□□□ 0.54
PIKFYVE-206ENST00000443896 LZTS2Q9BRK4 669 aa18.42■□□□□ 0.54
PIKFYVE-206ENST00000443896 STX8Q9UNK0 236 aa18.42■□□□□ 0.54
PIKFYVE-206ENST00000443896 TMEM232C9JQI7 657 aa18.41■□□□□ 0.54
PIKFYVE-206ENST00000443896 HSPA1LP34931 641 aa18.41■□□□□ 0.54
PIKFYVE-206ENST00000443896 EP400NLQ6ZTU2 488 aa18.41■□□□□ 0.54
PIKFYVE-206ENST00000443896 PYM1Q9BRP8 204 aaKnown RBP18.41■□□□□ 0.54
PIKFYVE-206ENST00000443896 EP400Q96L91 3159 aa18.41■□□□□ 0.54
PIKFYVE-206ENST00000443896 PSDA5PKW4 1024 aaPredicted RBP18.41■□□□□ 0.54
PIKFYVE-206ENST00000443896 WWC2Q6AWC2 1192 aa18.41■□□□□ 0.54
PIKFYVE-206ENST00000443896 GALNT17Q6IS24 598 aa18.41■□□□□ 0.54
PIKFYVE-206ENST00000443896 TMC4Q7Z404 712 aa18.41■□□□□ 0.54
PIKFYVE-206ENST00000443896 TRMT44Q8IYL2 757 aaKnown RBP18.41■□□□□ 0.54
PIKFYVE-206ENST00000443896 FAM177A1Q8N128 213 aaPredicted RBP18.41■□□□□ 0.54
PIKFYVE-206ENST00000443896 ZNF397Q8NF99 534 aaPredicted RBP18.41■□□□□ 0.54
PIKFYVE-206ENST00000443896 NEDD1Q8NHV4 660 aa18.41■□□□□ 0.54
PIKFYVE-206ENST00000443896 EYA3Q99504 573 aa18.41■□□□□ 0.54
PIKFYVE-206ENST00000443896 CCDC148Q8NFR7 591 aa18.41■□□□□ 0.54
PIKFYVE-206ENST00000443896 ZCCHC17Q9NP64 241 aaKnown RBP18.41■□□□□ 0.54
PIKFYVE-206ENST00000443896 ZNF446Q9NWS9 450 aa18.41■□□□□ 0.54
PIKFYVE-206ENST00000443896 LCMT1Q9UIC8 334 aa18.41■□□□□ 0.54
PIKFYVE-206ENST00000443896 TOP1P11387 765 aaKnown RBP18.4■□□□□ 0.54
PIKFYVE-206ENST00000443896 TEX2Q8IWB9 1127 aa18.4■□□□□ 0.54
PIKFYVE-206ENST00000443896 IQUBQ8NA54 791 aa18.4■□□□□ 0.54
PIKFYVE-206ENST00000443896 QTRT2Q9H974 415 aaKnown RBP18.4■□□□□ 0.54
PIKFYVE-206ENST00000443896 BARHL2Q9NY43 387 aa18.4■□□□□ 0.54
PIKFYVE-206ENST00000443896 STXBP3O00186 592 aa18.4■□□□□ 0.54
PIKFYVE-206ENST00000443896 CASP1P29466 404 aa18.4■□□□□ 0.54
PIKFYVE-206ENST00000443896 SYT10Q6XYQ8 523 aa18.4■□□□□ 0.54
PIKFYVE-206ENST00000443896 SP8Q8IXZ3 490 aa18.4■□□□□ 0.54
PIKFYVE-206ENST00000443896 SPZ1Q9BXG8 430 aa18.4■□□□□ 0.54
PIKFYVE-206ENST00000443896 C6orf229H3BNL8 230 aa18.39■□□□□ 0.53
PIKFYVE-206ENST00000443896 LONP1P36776 959 aaKnown RBP18.39■□□□□ 0.53
PIKFYVE-206ENST00000443896 CUL4BQ13620 913 aa18.39■□□□□ 0.53
PIKFYVE-206ENST00000443896 HSP90AA4PQ58FG1 418 aa18.39■□□□□ 0.53
PIKFYVE-206ENST00000443896 PDXDC2PQ6P474 469 aa18.39■□□□□ 0.53
PIKFYVE-206ENST00000443896 PCDHA6Q9UN73 950 aa18.39■□□□□ 0.53
PIKFYVE-206ENST00000443896 PCDHA8Q9Y5H6 950 aa18.39■□□□□ 0.53
PIKFYVE-206ENST00000443896 KIF2AO00139 706 aaPredicted RBP18.39■□□□□ 0.53
PIKFYVE-206ENST00000443896 TBX2Q13207 712 aaPredicted RBP18.39■□□□□ 0.53
PIKFYVE-206ENST00000443896 GPATCH11Q8N954 259 aa18.39■□□□□ 0.53
PIKFYVE-206ENST00000443896 LRRN4CLQ8ND94 238 aa18.39■□□□□ 0.53
PIKFYVE-206ENST00000443896 RASGRP4Q8TDF6 673 aa18.39■□□□□ 0.53
PIKFYVE-206ENST00000443896 FOCADQ5VW36 1801 aa18.39■□□□□ 0.53
PIKFYVE-206ENST00000443896 PPEF1O14829 653 aaPredicted RBP18.38■□□□□ 0.53
PIKFYVE-206ENST00000443896 TRIM37O94972 964 aa18.38■□□□□ 0.53
PIKFYVE-206ENST00000443896 CD44P16070 742 aaKnown RBP18.38■□□□□ 0.53
PIKFYVE-206ENST00000443896 NOVP48745 357 aa18.38■□□□□ 0.53
PIKFYVE-206ENST00000443896 PPP1R13BQ96KQ4 1090 aa18.38■□□□□ 0.53
PIKFYVE-206ENST00000443896 SAMSN1Q9NSI8 373 aaKnown RBP18.38■□□□□ 0.53
PIKFYVE-206ENST00000443896 MYH1P12882 1939 aa18.38■□□□□ 0.53
PIKFYVE-206ENST00000443896 CCDC194A0A1B0GVG4 234 aa18.38■□□□□ 0.53
PIKFYVE-206ENST00000443896 KLRF2D3W0D1 207 aa18.38■□□□□ 0.53
PIKFYVE-206ENST00000443896 ERCC6LQ2NKX8 1250 aa18.38■□□□□ 0.53
PIKFYVE-206ENST00000443896 HEATR3Q7Z4Q2 680 aa18.38■□□□□ 0.53
PIKFYVE-206ENST00000443896 SPATA1Q5VX52 437 aa18.38■□□□□ 0.53
PIKFYVE-206ENST00000443896 KRT27Q7Z3Y8 459 aa18.38■□□□□ 0.53
PIKFYVE-206ENST00000443896 PROM2Q8N271 834 aa18.37■□□□□ 0.53
PIKFYVE-206ENST00000443896 DAGLAQ9Y4D2 1042 aa18.37■□□□□ 0.53
PIKFYVE-206ENST00000443896 PPP1R3GB7ZBB8 358 aa18.37■□□□□ 0.53
PIKFYVE-206ENST00000443896 GOLGA8HP0CJ92 632 aa18.37■□□□□ 0.53
PIKFYVE-206ENST00000443896 MTRQ99707 1265 aa18.37■□□□□ 0.53
PIKFYVE-206ENST00000443896 MTMR7Q9Y216 660 aa18.37■□□□□ 0.53
PIKFYVE-206ENST00000443896 ATP6V0A2Q9Y487 856 aa18.37■□□□□ 0.53
PIKFYVE-206ENST00000443896 BRWD3Q6RI45 1802 aa18.36■□□□□ 0.53
PIKFYVE-206ENST00000443896 SYNRGQ9UMZ2 1314 aa18.36■□□□□ 0.53
PIKFYVE-206ENST00000443896 MYCNP04198 464 aaPredicted RBP18.36■□□□□ 0.53
PIKFYVE-206ENST00000443896 COA1Q9GZY4 146 aa18.36■□□□□ 0.53
PIKFYVE-206ENST00000443896 SUGT1Q9Y2Z0 365 aa18.36■□□□□ 0.53
PIKFYVE-206ENST00000443896 ANKRD31Q8N7Z5 1873 aa18.36■□□□□ 0.53
PIKFYVE-206ENST00000443896 PARP1P09874 1014 aaKnown RBP18.36■□□□□ 0.53
PIKFYVE-206ENST00000443896 SMARCA1P28370 1054 aa18.36■□□□□ 0.53
PIKFYVE-206ENST00000443896 CYP2C19P33261 490 aa18.36■□□□□ 0.53
PIKFYVE-206ENST00000443896 GTF2IP78347 998 aa18.36■□□□□ 0.53
PIKFYVE-206ENST00000443896 SLC20A2Q08357 652 aa18.36■□□□□ 0.53
PIKFYVE-206ENST00000443896 NR1I3Q14994 352 aa18.36■□□□□ 0.53
PIKFYVE-206ENST00000443896 SYCP1Q15431 976 aa18.36■□□□□ 0.53
PIKFYVE-206ENST00000443896 PTPN21Q16825 1174 aa18.36■□□□□ 0.53
PIKFYVE-206ENST00000443896 TXNRD1Q16881 649 aa18.36■□□□□ 0.53
PIKFYVE-206ENST00000443896 SPECC1LQ69YQ0 1117 aa18.36■□□□□ 0.53
PIKFYVE-206ENST00000443896 CEP95Q96GE4 821 aa18.36■□□□□ 0.53
PIKFYVE-206ENST00000443896 ZMYND12Q9H0C1 365 aa18.36■□□□□ 0.53
PIKFYVE-206ENST00000443896 GTPBP6O43824 516 aaPredicted RBP18.36■□□□□ 0.53
PIKFYVE-206ENST00000443896 RASGRP2Q7LDG7 609 aa18.36■□□□□ 0.53
PIKFYVE-206ENST00000443896 PLIN4Q96Q06 1357 aa18.35■□□□□ 0.53
PIKFYVE-206ENST00000443896 A0A1B0GTH6 734 aa18.35■□□□□ 0.53
PIKFYVE-206ENST00000443896 GTF2A1P52655 376 aaPredicted RBP18.35■□□□□ 0.53
PIKFYVE-206ENST00000443896 APTXQ7Z2E3 356 aaKnown RBP18.35■□□□□ 0.53
PIKFYVE-206ENST00000443896 TMEM139Q8IV31 216 aa18.35■□□□□ 0.53
PIKFYVE-206ENST00000443896 STAMQ92783 540 aa18.35■□□□□ 0.53
PIKFYVE-206ENST00000443896 HMGB2P26583 209 aaKnown RBP18.35■□□□□ 0.53
PIKFYVE-206ENST00000443896 TXLNAP40222 546 aa18.35■□□□□ 0.53
PIKFYVE-206ENST00000443896 CDKAL1Q5VV42 579 aa18.35■□□□□ 0.53
PIKFYVE-206ENST00000443896 CCP110O43303 1012 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms