RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 PAIP2Q9BPZ3 127 aaKnown RBP24.88■■□□□ 1.57
CTDSPL-206ENST00000443503 MTRF1LQ9UGC7 380 aaKnown RBP24.88■■□□□ 1.57
CTDSPL-206ENST00000443503 MECOMQ03112 1051 aa24.88■■□□□ 1.57
CTDSPL-206ENST00000443503 CALCOCO2Q13137 446 aa24.88■■□□□ 1.57
CTDSPL-206ENST00000443503 PPP1R7Q15435 360 aa24.88■■□□□ 1.57
CTDSPL-206ENST00000443503 NBPF11Q86T75 865 aa24.88■■□□□ 1.57
CTDSPL-206ENST00000443503 ARFGAP2Q8N6H7 521 aa24.88■■□□□ 1.57
CTDSPL-206ENST00000443503 NRKQ7Z2Y5 1582 aa24.88■■□□□ 1.57
CTDSPL-206ENST00000443503 IFT74Q96LB3 600 aa24.87■■□□□ 1.57
CTDSPL-206ENST00000443503 TMOD4Q9NZQ9 345 aa24.87■■□□□ 1.57
CTDSPL-206ENST00000443503 CEP104O60308 925 aa24.87■■□□□ 1.57
CTDSPL-206ENST00000443503 GOLGA8FQ08AF8 430 aa24.87■■□□□ 1.57
CTDSPL-206ENST00000443503 GOLGA8DPQ0D2H9 430 aa24.87■■□□□ 1.57
CTDSPL-206ENST00000443503 ISCA1Q9BUE6 129 aa24.87■■□□□ 1.57
CTDSPL-206ENST00000443503 DDX25Q9UHL0 483 aaKnown RBP24.87■■□□□ 1.57
CTDSPL-206ENST00000443503 FBXO11Q86XK2 927 aa24.87■■□□□ 1.57
CTDSPL-206ENST00000443503 BSDC1Q9NW68 430 aaPredicted RBP24.87■■□□□ 1.57
CTDSPL-206ENST00000443503 TCP10L2B9ZVM9 353 aa24.87■■□□□ 1.57
CTDSPL-206ENST00000443503 IKBKBO14920 756 aa24.87■■□□□ 1.57
CTDSPL-206ENST00000443503 FLOT1O75955 427 aa24.87■■□□□ 1.57
CTDSPL-206ENST00000443503 ERCC5P28715 1186 aaPredicted RBP24.87■■□□□ 1.57
CTDSPL-206ENST00000443503 CCDC26Q8TAB7 109 aa24.87■■□□□ 1.57
CTDSPL-206ENST00000443503 FAM76AQ8TAV0 307 aa24.87■■□□□ 1.57
CTDSPL-206ENST00000443503 SLFN14P0C7P3 912 aa24.86■■□□□ 1.57
CTDSPL-206ENST00000443503 FAM26FQ5R3K3 315 aa24.86■■□□□ 1.57
CTDSPL-206ENST00000443503 SEL1L2Q5TEA6 688 aa24.86■■□□□ 1.57
CTDSPL-206ENST00000443503 FAM170AA1A519 330 aa24.86■■□□□ 1.57
CTDSPL-206ENST00000443503 KIAA1524Q8TCG1 905 aa24.86■■□□□ 1.57
CTDSPL-206ENST00000443503 SELENOSQ9BQE4 189 aa24.86■■□□□ 1.57
CTDSPL-206ENST00000443503 FERMT1Q9BQL6 677 aa24.86■■□□□ 1.57
CTDSPL-206ENST00000443503 PCDHA4Q9UN74 947 aa24.86■■□□□ 1.57
CTDSPL-206ENST00000443503 ZBED4O75132 1171 aa24.86■■□□□ 1.57
CTDSPL-206ENST00000443503 DDX12PQ92771 950 aa24.86■■□□□ 1.57
CTDSPL-206ENST00000443503 ATP2A1O14983 1001 aa24.85■■□□□ 1.57
CTDSPL-206ENST00000443503 BBOX1O75936 387 aa24.85■■□□□ 1.57
CTDSPL-206ENST00000443503 TRIM37O94972 964 aa24.85■■□□□ 1.57
CTDSPL-206ENST00000443503 TMEM232C9JQI7 657 aa24.85■■□□□ 1.57
CTDSPL-206ENST00000443503 CYP4A11Q02928 519 aa24.85■■□□□ 1.57
CTDSPL-206ENST00000443503 CLEC4GQ6UXB4 293 aa24.85■■□□□ 1.57
CTDSPL-206ENST00000443503 UBLCP1Q8WVY7 318 aaPredicted RBP24.85■■□□□ 1.57
CTDSPL-206ENST00000443503 EBAG9O00559 213 aa24.85■■□□□ 1.57
CTDSPL-206ENST00000443503 COPB1P53618 953 aaKnown RBP24.85■■□□□ 1.57
CTDSPL-206ENST00000443503 SAR1BQ9Y6B6 198 aa24.85■■□□□ 1.57
CTDSPL-206ENST00000443503 CPS1P31327 1500 aa24.85■■□□□ 1.57
CTDSPL-206ENST00000443503 TICAM2Q86XR7 235 aa24.85■■□□□ 1.57
CTDSPL-206ENST00000443503 PGBD1Q96JS3 809 aa24.85■■□□□ 1.57
CTDSPL-206ENST00000443503 TRIM31Q9BZY9 425 aa24.85■■□□□ 1.57
CTDSPL-206ENST00000443503 CTTNBP2NLQ9P2B4 639 aa24.85■■□□□ 1.57
CTDSPL-206ENST00000443503 EXOC7Q9UPT5 735 aa24.85■■□□□ 1.57
CTDSPL-206ENST00000443503 STX10O60499 249 aa24.84■■□□□ 1.57
CTDSPL-206ENST00000443503 XRCC5P13010 732 aaKnown RBP24.84■■□□□ 1.57
CTDSPL-206ENST00000443503 ARHGAP44Q17R89 818 aa24.84■■□□□ 1.57
CTDSPL-206ENST00000443503 KIFAP3Q92845 792 aa24.84■■□□□ 1.57
CTDSPL-206ENST00000443503 ARMCX3Q9UH62 379 aaPredicted RBP24.84■■□□□ 1.57
CTDSPL-206ENST00000443503 SERPINB13Q9UIV8 391 aa24.84■■□□□ 1.57
CTDSPL-206ENST00000443503 CASP14P31944 242 aa24.84■■□□□ 1.57
CTDSPL-206ENST00000443503 USP17L2Q6R6M4 530 aa24.84■■□□□ 1.57
CTDSPL-206ENST00000443503 FLAD1Q8NFF5 587 aa24.84■■□□□ 1.57
CTDSPL-206ENST00000443503 LSM14BQ9BX40 385 aaKnown RBP24.84■■□□□ 1.57
CTDSPL-206ENST00000443503 SCARF1Q14162 830 aa24.84■■□□□ 1.57
CTDSPL-206ENST00000443503 TRPC5Q9UL62 973 aaPredicted RBP24.84■■□□□ 1.57
CTDSPL-206ENST00000443503 CYP19A1P11511 503 aaPredicted RBP24.84■■□□□ 1.57
CTDSPL-206ENST00000443503 KLHL7Q8IXQ5 586 aa24.84■■□□□ 1.57
CTDSPL-206ENST00000443503 MYO3AQ8NEV4 1616 aa24.84■■□□□ 1.57
CTDSPL-206ENST00000443503 NEXMIFQ5QGS0 1516 aa24.83■■□□□ 1.57
CTDSPL-206ENST00000443503 PSDA5PKW4 1024 aaPredicted RBP24.83■■□□□ 1.57
CTDSPL-206ENST00000443503 PRPF3O43395 683 aaKnown RBP24.83■■□□□ 1.57
CTDSPL-206ENST00000443503 FOXO4P98177 505 aa24.83■■□□□ 1.57
CTDSPL-206ENST00000443503 CCDC17Q96LX7 622 aa24.83■■□□□ 1.57
CTDSPL-206ENST00000443503 CCDC114Q96M63 670 aa24.83■■□□□ 1.57
CTDSPL-206ENST00000443503 GDAP1L1Q96MZ0 367 aa24.83■■□□□ 1.57
CTDSPL-206ENST00000443503 GPR101Q96P66 508 aaPredicted RBP24.83■■□□□ 1.57
CTDSPL-206ENST00000443503 NUCKS1Q9H1E3 243 aaKnown RBP24.83■■□□□ 1.57
CTDSPL-206ENST00000443503 QTRT2Q9H974 415 aaKnown RBP24.83■■□□□ 1.57
CTDSPL-206ENST00000443503 CAMSAP1Q5T5Y3 1602 aa24.83■■□□□ 1.57
CTDSPL-206ENST00000443503 OVOS2A0A0J9YW53 1432 aa24.83■■□□□ 1.57
CTDSPL-206ENST00000443503 OVOS2Q6IE36 1432 aa24.83■■□□□ 1.57
CTDSPL-206ENST00000443503 USP17L3A6NCW0 530 aa24.83■■□□□ 1.57
CTDSPL-206ENST00000443503 USP17L4A6NCW7 530 aa24.83■■□□□ 1.57
CTDSPL-206ENST00000443503 DKC1O60832 514 aaKnown RBP eCLIP24.83■■□□□ 1.572e-8■■■■■ 44.8
CTDSPL-206ENST00000443503 USP17L1Q7RTZ2 530 aa24.83■■□□□ 1.57
CTDSPL-206ENST00000443503 MAN1B1Q9UKM7 699 aa24.83■■□□□ 1.57
CTDSPL-206ENST00000443503 PRDX5P30044 214 aa24.83■■□□□ 1.57
CTDSPL-206ENST00000443503 GPATCH4Q5T3I0 446 aaKnown RBP24.83■■□□□ 1.57
CTDSPL-206ENST00000443503 EPSTI1Q96J88 318 aa24.83■■□□□ 1.57
CTDSPL-206ENST00000443503 PANK4Q9NVE7 773 aa24.83■■□□□ 1.57
CTDSPL-206ENST00000443503 PPEF1O14829 653 aaPredicted RBP24.82■■□□□ 1.56
CTDSPL-206ENST00000443503 PLEKHA8P1O95397 391 aa24.82■■□□□ 1.56
CTDSPL-206ENST00000443503 CYP2J2P51589 502 aa24.82■■□□□ 1.56
CTDSPL-206ENST00000443503 NCBP1Q09161 790 aaKnown RBP24.82■■□□□ 1.56
CTDSPL-206ENST00000443503 SPICE1Q8N0Z3 855 aa24.82■■□□□ 1.56
CTDSPL-206ENST00000443503 ALAS1P13196 640 aa24.82■■□□□ 1.56
CTDSPL-206ENST00000443503 PIGSQ96S52 555 aa24.82■■□□□ 1.56
CTDSPL-206ENST00000443503 NAP1L3Q99457 506 aaPredicted RBP24.82■■□□□ 1.56
CTDSPL-206ENST00000443503 EPN1Q9Y6I3 576 aaPredicted RBP24.82■■□□□ 1.56
CTDSPL-206ENST00000443503 RPS6KA1Q15418 735 aa24.82■■□□□ 1.56
CTDSPL-206ENST00000443503 DBNDD1Q9H9R9 158 aa24.82■■□□□ 1.56
CTDSPL-206ENST00000443503 KIF4AO95239 1232 aa24.82■■□□□ 1.56
CTDSPL-206ENST00000443503 ABCB5Q2M3G0 1257 aa24.82■■□□□ 1.56
CTDSPL-206ENST00000443503 CYB5R4Q7L1T6 521 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms