RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 C1QTNF9P0C862 333 aa9.28□□□□□ -0.92
SSXP3-201ENST00000442971 ZNF200P98182 395 aaPredicted RBP9.28□□□□□ -0.92
SSXP3-201ENST00000442971 CDC42EP5Q6NZY7 148 aa9.28□□□□□ -0.92
SSXP3-201ENST00000442971 AGBL1Q96MI9 1066 aa9.28□□□□□ -0.92
SSXP3-201ENST00000442971 ZBED2Q9BTP6 218 aa9.28□□□□□ -0.92
SSXP3-201ENST00000442971 METRNQ9UJH8 293 aa9.28□□□□□ -0.92
SSXP3-201ENST00000442971 SCN5AQ14524 2016 aa9.27□□□□□ -0.93
SSXP3-201ENST00000442971 TTLL13PA6NNM8 815 aa9.27□□□□□ -0.93
SSXP3-201ENST00000442971 UNQ6494/PRO21346Q6UXR6 183 aa9.27□□□□□ -0.93
SSXP3-201ENST00000442971 ZBTB33Q86T24 672 aa9.27□□□□□ -0.93
SSXP3-201ENST00000442971 CCDC105Q8IYK2 499 aa9.27□□□□□ -0.93
SSXP3-201ENST00000442971 ADAM32Q8TC27 787 aa9.27□□□□□ -0.93
SSXP3-201ENST00000442971 CWC25Q9NXE8 425 aaPredicted RBP9.27□□□□□ -0.93
SSXP3-201ENST00000442971 CHPF2Q9P2E5 772 aa9.27□□□□□ -0.93
SSXP3-201ENST00000442971 NRBP1Q9UHY1 535 aa9.27□□□□□ -0.93
SSXP3-201ENST00000442971 ZNF236Q9UL36 1845 aa9.26□□□□□ -0.93
SSXP3-201ENST00000442971 ROBO3Q96MS0 1386 aa9.26□□□□□ -0.93
SSXP3-201ENST00000442971 MAST3O60307 1309 aa9.26□□□□□ -0.93
SSXP3-201ENST00000442971 USP17L5A8MUK1 530 aa9.26□□□□□ -0.93
SSXP3-201ENST00000442971 COBLO75128 1261 aa9.26□□□□□ -0.93
SSXP3-201ENST00000442971 ASGR1P07306 291 aa9.26□□□□□ -0.93
SSXP3-201ENST00000442971 PYGBP11216 843 aa9.26□□□□□ -0.93
SSXP3-201ENST00000442971 AKR1A1P14550 325 aa9.26□□□□□ -0.93
SSXP3-201ENST00000442971 ITGA6P23229 1130 aa9.26□□□□□ -0.93
SSXP3-201ENST00000442971 HIBADHP31937 336 aaKnown RBP9.26□□□□□ -0.93
SSXP3-201ENST00000442971 MTMR2Q13614 643 aa9.26□□□□□ -0.93
SSXP3-201ENST00000442971 TMEFF1Q8IYR6 380 aa9.26□□□□□ -0.93
SSXP3-201ENST00000442971 TBC1D22AQ8WUA7 517 aa9.26□□□□□ -0.93
SSXP3-201ENST00000442971 PIK3R5Q8WYR1 880 aa9.26□□□□□ -0.93
SSXP3-201ENST00000442971 RPGRIP1Q96KN7 1286 aa9.26□□□□□ -0.93
SSXP3-201ENST00000442971 SLC5A4Q9NY91 659 aa9.26□□□□□ -0.93
SSXP3-201ENST00000442971 MYADML2A6NDP7 307 aa9.25□□□□□ -0.93
SSXP3-201ENST00000442971 STRNO43815 780 aa9.25□□□□□ -0.93
SSXP3-201ENST00000442971 TBX10O75333 385 aa9.25□□□□□ -0.93
SSXP3-201ENST00000442971 EYA4O95677 639 aa9.25□□□□□ -0.93
SSXP3-201ENST00000442971 GYG1P46976 350 aa9.25□□□□□ -0.93
SSXP3-201ENST00000442971 BACE1P56817 501 aa9.25□□□□□ -0.93
SSXP3-201ENST00000442971 CHAF1AQ13111 956 aaPredicted RBP9.25□□□□□ -0.93
SSXP3-201ENST00000442971 NFE2L2Q16236 605 aa9.25□□□□□ -0.93
SSXP3-201ENST00000442971 ZC3H14Q6PJT7 736 aaKnown RBP9.25□□□□□ -0.93
SSXP3-201ENST00000442971 SH3BP5LQ7L8J4 393 aa9.25□□□□□ -0.93
SSXP3-201ENST00000442971 TMCO2Q7Z6W1 182 aaPredicted RBP9.25□□□□□ -0.93
SSXP3-201ENST00000442971 ZNF467Q7Z7K2 595 aaPredicted RBP9.25□□□□□ -0.93
SSXP3-201ENST00000442971 ZSCAN29Q8IWY8 852 aaPredicted RBP9.25□□□□□ -0.93
SSXP3-201ENST00000442971 DTWD2Q8NBA8 298 aa9.25□□□□□ -0.93
SSXP3-201ENST00000442971 SUMF1Q8NBK3 374 aa9.25□□□□□ -0.93
SSXP3-201ENST00000442971 PCSK9Q8NBP7 692 aaKnown RBP9.25□□□□□ -0.93
SSXP3-201ENST00000442971 MAML3Q96JK9 1138 aa9.25□□□□□ -0.93
SSXP3-201ENST00000442971 MYD88Q99836 296 aa9.25□□□□□ -0.93
SSXP3-201ENST00000442971 C17orf80Q9BSJ5 609 aa9.25□□□□□ -0.93
SSXP3-201ENST00000442971 MFSD1Q9H3U5 465 aa9.25□□□□□ -0.93
SSXP3-201ENST00000442971 AS3MTQ9HBK9 375 aa9.25□□□□□ -0.93
SSXP3-201ENST00000442971 NCDNQ9UBB6 729 aa9.25□□□□□ -0.93
SSXP3-201ENST00000442971 ATAD5Q96QE3 1844 aa9.24□□□□□ -0.93
SSXP3-201ENST00000442971 SALL1Q9NSC2 1324 aa9.24□□□□□ -0.93
SSXP3-201ENST00000442971 DOPEY1Q5JWR5 2465 aa9.24□□□□□ -0.93
SSXP3-201ENST00000442971 FANCMQ8IYD8 2048 aa9.24□□□□□ -0.93
SSXP3-201ENST00000442971 TAL1P17542 331 aaPredicted RBP9.24□□□□□ -0.93
SSXP3-201ENST00000442971 CST5P28325 142 aaPredicted RBP9.24□□□□□ -0.93
SSXP3-201ENST00000442971 KCNJ6P48051 423 aa9.24□□□□□ -0.93
SSXP3-201ENST00000442971 RBM25P49756 843 aaKnown RBP9.24□□□□□ -0.93
SSXP3-201ENST00000442971 LARP1BQ659C4 914 aaKnown RBP9.24□□□□□ -0.93
SSXP3-201ENST00000442971 RAD9AQ99638 391 aa9.24□□□□□ -0.93
SSXP3-201ENST00000442971 PHF7Q9BWX1 381 aaPredicted RBP9.24□□□□□ -0.93
SSXP3-201ENST00000442971 OSBPL5Q9H0X9 879 aaPredicted RBP9.24□□□□□ -0.93
SSXP3-201ENST00000442971 TSPYL4Q9UJ04 414 aa9.24□□□□□ -0.93
SSXP3-201ENST00000442971 PIEZO2Q9H5I5 2752 aa9.24□□□□□ -0.93
SSXP3-201ENST00000442971 KIF16BQ96L93 1317 aa9.23□□□□□ -0.93
SSXP3-201ENST00000442971 IRX5P78411 483 aaPredicted RBP9.23□□□□□ -0.93
SSXP3-201ENST00000442971 HYAL1Q12794 435 aa9.23□□□□□ -0.93
SSXP3-201ENST00000442971 VARS2Q5ST30 1063 aaKnown RBP9.23□□□□□ -0.93
SSXP3-201ENST00000442971 UBALD2Q8IYN6 164 aa9.23□□□□□ -0.93
SSXP3-201ENST00000442971 SLC43A3Q8NBI5 491 aa9.23□□□□□ -0.93
SSXP3-201ENST00000442971 FAM84BQ96KN1 310 aaPredicted RBP9.23□□□□□ -0.93
SSXP3-201ENST00000442971 CRBNQ96SW2 442 aa9.23□□□□□ -0.93
SSXP3-201ENST00000442971 WDR18Q9BV38 432 aa9.23□□□□□ -0.93
SSXP3-201ENST00000442971 TRPV6Q9H1D0 765 aa9.23□□□□□ -0.93
SSXP3-201ENST00000442971 USP40Q9NVE5 1235 aa9.23□□□□□ -0.93
SSXP3-201ENST00000442971 KNSTRNQ9Y448 316 aa9.23□□□□□ -0.93
SSXP3-201ENST00000442971 DDTLA6NHG4 134 aaPredicted RBP9.22□□□□□ -0.93
SSXP3-201ENST00000442971 EIF4E1BA6NMX2 242 aaKnown RBP9.22□□□□□ -0.93
SSXP3-201ENST00000442971 C19orf81C9J6K1 198 aa9.22□□□□□ -0.93
SSXP3-201ENST00000442971 PI15O43692 258 aa9.22□□□□□ -0.93
SSXP3-201ENST00000442971 ENTPD3O75355 529 aa9.22□□□□□ -0.93
SSXP3-201ENST00000442971 BAIAP3O94812 1187 aa9.22□□□□□ -0.93
SSXP3-201ENST00000442971 C6orf222P0C671 652 aaPredicted RBP9.22□□□□□ -0.93
SSXP3-201ENST00000442971 ZNF865P0CJ78 1059 aaPredicted RBP9.22□□□□□ -0.93
SSXP3-201ENST00000442971 RGS3P49796 1198 aa9.22□□□□□ -0.93
SSXP3-201ENST00000442971 N4BP2L1Q5TBK1 243 aaPredicted RBP9.22□□□□□ -0.93
SSXP3-201ENST00000442971 KREMEN2Q8NCW0 462 aa9.22□□□□□ -0.93
SSXP3-201ENST00000442971 SHCBP1Q8NEM2 672 aa9.22□□□□□ -0.93
SSXP3-201ENST00000442971 MSLNLQ96KJ4 702 aa9.22□□□□□ -0.93
SSXP3-201ENST00000442971 FTOQ9C0B1 505 aaKnown RBP eCLIP9.22□□□□□ -0.93
SSXP3-201ENST00000442971 BTBD7Q9P203 1132 aa9.22□□□□□ -0.93
SSXP3-201ENST00000442971 IQSEC3Q9UPP2 1182 aaPredicted RBP9.22□□□□□ -0.93
SSXP3-201ENST00000442971 SUGT1Q9Y2Z0 365 aa9.22□□□□□ -0.93
SSXP3-201ENST00000442971 DLG5Q8TDM6 1919 aa9.21□□□□□ -0.94
SSXP3-201ENST00000442971 TMEM8BA6NDV4 472 aa9.21□□□□□ -0.94
SSXP3-201ENST00000442971 H3BNC9 293 aa9.21□□□□□ -0.94
SSXP3-201ENST00000442971 SLC30A4O14863 429 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms