RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 PPP4R3BQ5MIZ7 849 aa22.41■■□□□ 1.18
HMGB3P22-201ENST00000442010 GMCL1Q96IK5 515 aa22.41■■□□□ 1.18
HMGB3P22-201ENST00000442010 MAML3Q96JK9 1138 aa22.41■■□□□ 1.18
HMGB3P22-201ENST00000442010 MMP19Q99542 508 aa22.41■■□□□ 1.18
HMGB3P22-201ENST00000442010 TEX13BQ9BXU2 312 aa22.41■■□□□ 1.18
HMGB3P22-201ENST00000442010 SLC38A10Q9HBR0 1119 aa22.41■■□□□ 1.18
HMGB3P22-201ENST00000442010 RIPK3Q9Y572 518 aa22.41■■□□□ 1.18
HMGB3P22-201ENST00000442010 MCM3APO60318 1980 aa22.4■■□□□ 1.18
HMGB3P22-201ENST00000442010 CWC27Q6UX04 472 aaKnown RBP22.4■■□□□ 1.18
HMGB3P22-201ENST00000442010 SLC5A4Q9NY91 659 aa22.4■■□□□ 1.18
HMGB3P22-201ENST00000442010 STX8Q9UNK0 236 aa22.4■■□□□ 1.18
HMGB3P22-201ENST00000442010 SLC34A2O95436 690 aa22.39■■□□□ 1.17
HMGB3P22-201ENST00000442010 COL6A1P12109 1028 aa22.39■■□□□ 1.17
HMGB3P22-201ENST00000442010 MFAP1P55081 439 aaKnown RBP22.39■■□□□ 1.17
HMGB3P22-201ENST00000442010 HAND2P61296 217 aa22.39■■□□□ 1.17
HMGB3P22-201ENST00000442010 ZNF792Q3KQV3 632 aa22.39■■□□□ 1.17
HMGB3P22-201ENST00000442010 SNRNP48Q6IEG0 339 aaKnown RBP22.39■■□□□ 1.17
HMGB3P22-201ENST00000442010 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.39■■□□□ 1.17
HMGB3P22-201ENST00000442010 KIFC2Q96AC6 838 aa22.39■■□□□ 1.17
HMGB3P22-201ENST00000442010 TCP11L1Q9NUJ3 509 aa22.39■■□□□ 1.17
HMGB3P22-201ENST00000442010 DDX20Q9UHI6 824 aaKnown RBP22.39■■□□□ 1.17
HMGB3P22-201ENST00000442010 PFASO15067 1338 aa22.38■■□□□ 1.17
HMGB3P22-201ENST00000442010 TRIOBPQ9H2D6 2365 aa22.38■■□□□ 1.17
HMGB3P22-201ENST00000442010 HIP1O00291 1037 aa22.38■■□□□ 1.17
HMGB3P22-201ENST00000442010 PLA2G6O60733 806 aa22.38■■□□□ 1.17
HMGB3P22-201ENST00000442010 ZBED4O75132 1171 aa22.38■■□□□ 1.17
HMGB3P22-201ENST00000442010 PGK2P07205 417 aa22.38■■□□□ 1.17
HMGB3P22-201ENST00000442010 GSPT1P15170 499 aaKnown RBP22.38■■□□□ 1.17
HMGB3P22-201ENST00000442010 TBC1D10CQ8IV04 446 aa22.38■■□□□ 1.17
HMGB3P22-201ENST00000442010 STAG1Q8WVM7 1258 aa22.38■■□□□ 1.17
HMGB3P22-201ENST00000442010 C11orf49Q9H6J7 331 aa22.38■■□□□ 1.17
HMGB3P22-201ENST00000442010 DIAPH3Q9NSV4 1193 aa22.38■■□□□ 1.17
HMGB3P22-201ENST00000442010 DIS3Q9Y2L1 958 aaKnown RBP22.38■■□□□ 1.17
HMGB3P22-201ENST00000442010 TMEM232C9JQI7 657 aa22.37■■□□□ 1.17
HMGB3P22-201ENST00000442010 MSCO60682 206 aa22.37■■□□□ 1.17
HMGB3P22-201ENST00000442010 PCP11498 1178 aaKnown RBP22.37■■□□□ 1.17
HMGB3P22-201ENST00000442010 MCCP23508 829 aa22.37■■□□□ 1.17
HMGB3P22-201ENST00000442010 SLC1A4P43007 532 aa22.37■■□□□ 1.17
HMGB3P22-201ENST00000442010 OAZ1P54368 228 aa22.37■■□□□ 1.17
HMGB3P22-201ENST00000442010 KCTD2Q14681 263 aa22.37■■□□□ 1.17
HMGB3P22-201ENST00000442010 HABP4Q5JVS0 413 aaKnown RBP22.37■■□□□ 1.17
HMGB3P22-201ENST00000442010 AKNAD1Q5T1N1 836 aa22.37■■□□□ 1.17
HMGB3P22-201ENST00000442010 TTC22Q5TAA0 569 aa22.37■■□□□ 1.17
HMGB3P22-201ENST00000442010 RASGRP2Q7LDG7 609 aa22.37■■□□□ 1.17
HMGB3P22-201ENST00000442010 CPXCR1Q8N123 301 aa22.37■■□□□ 1.17
HMGB3P22-201ENST00000442010 RAVER2Q9HCJ3 691 aaKnown RBP22.37■■□□□ 1.17
HMGB3P22-201ENST00000442010 FDX1P10109 184 aa22.36■■□□□ 1.17
HMGB3P22-201ENST00000442010 STAT2P52630 851 aa22.36■■□□□ 1.17
HMGB3P22-201ENST00000442010 RRP12Q5JTH9 1297 aaKnown RBP22.36■■□□□ 1.17
HMGB3P22-201ENST00000442010 RCSD1Q6JBY9 416 aa22.36■■□□□ 1.17
HMGB3P22-201ENST00000442010 FAM160B2Q86V87 743 aa22.36■■□□□ 1.17
HMGB3P22-201ENST00000442010 IL25Q9H293 177 aa22.36■■□□□ 1.17
HMGB3P22-201ENST00000442010 COLQQ9Y215 455 aaPredicted RBP22.36■■□□□ 1.17
HMGB3P22-201ENST00000442010 NR2E3Q9Y5X4 410 aa22.36■■□□□ 1.17
HMGB3P22-201ENST00000442010 ZNF536O15090 1300 aa22.35■■□□□ 1.17
HMGB3P22-201ENST00000442010 DNAJC25-GNG10A0A024R161 153 aa22.35■■□□□ 1.17
HMGB3P22-201ENST00000442010 EVI5O60447 810 aa22.35■■□□□ 1.17
HMGB3P22-201ENST00000442010 CNGA1P29973 690 aa22.35■■□□□ 1.17
HMGB3P22-201ENST00000442010 PRAMEF19Q5SWL8 479 aa22.35■■□□□ 1.17
HMGB3P22-201ENST00000442010 MFSD6Q6ZSS7 791 aa22.35■■□□□ 1.17
HMGB3P22-201ENST00000442010 CHURC1Q8WUH1 139 aa22.35■■□□□ 1.17
HMGB3P22-201ENST00000442010 DSCC1Q9BVC3 393 aa22.35■■□□□ 1.17
HMGB3P22-201ENST00000442010 TOMM22Q9NS69 142 aa22.35■■□□□ 1.17
HMGB3P22-201ENST00000442010 RANBP2P49792 3224 aaKnown RBP22.35■■□□□ 1.17
HMGB3P22-201ENST00000442010 SEPT4O43236 478 aa22.34■■□□□ 1.17
HMGB3P22-201ENST00000442010 KCTD1Q719H9 257 aa22.34■■□□□ 1.17
HMGB3P22-201ENST00000442010 TMEM47Q9BQJ4 181 aa22.34■■□□□ 1.17
HMGB3P22-201ENST00000442010 TINF2Q9BSI4 451 aa22.34■■□□□ 1.17
HMGB3P22-201ENST00000442010 PRO3102Q9H379 93 aa22.34■■□□□ 1.17
HMGB3P22-201ENST00000442010 NRBP1Q9UHY1 535 aa22.34■■□□□ 1.17
HMGB3P22-201ENST00000442010 NEDD4P46934 1319 aa22.33■■□□□ 1.17
HMGB3P22-201ENST00000442010 LCTP09848 1927 aa22.33■■□□□ 1.17
HMGB3P22-201ENST00000442010 TOP1P11387 765 aaKnown RBP22.33■■□□□ 1.17
HMGB3P22-201ENST00000442010 CHST13Q8NET6 341 aa22.33■■□□□ 1.17
HMGB3P22-201ENST00000442010 DCAF4Q8WV16 495 aa22.33■■□□□ 1.17
HMGB3P22-201ENST00000442010 CHMP4CQ96CF2 233 aa22.33■■□□□ 1.17
HMGB3P22-201ENST00000442010 ZNF213O14771 459 aa22.32■■□□□ 1.16
HMGB3P22-201ENST00000442010 RNF41Q9H4P4 317 aaPredicted RBP22.32■■□□□ 1.16
HMGB3P22-201ENST00000442010 PRR12Q9ULL5 1215 aa22.32■■□□□ 1.16
HMGB3P22-201ENST00000442010 CTDP1Q9Y5B0 961 aaPredicted RBP22.32■■□□□ 1.16
HMGB3P22-201ENST00000442010 MAMDC4Q6UXC1 1216 aa22.31■■□□□ 1.16
HMGB3P22-201ENST00000442010 BTNL9Q6UXG8 535 aa22.31■■□□□ 1.16
HMGB3P22-201ENST00000442010 CHRDL2Q6WN34 429 aa22.31■■□□□ 1.16
HMGB3P22-201ENST00000442010 MSL3Q8N5Y2 521 aaKnown RBP22.31■■□□□ 1.16
HMGB3P22-201ENST00000442010 FGD4Q96M96 766 aa22.31■■□□□ 1.16
HMGB3P22-201ENST00000442010 TTC14Q96N46 770 aa22.31■■□□□ 1.16
HMGB3P22-201ENST00000442010 FBXO40Q9UH90 709 aa22.31■■□□□ 1.16
HMGB3P22-201ENST00000442010 DNM1LO00429 736 aa22.3■■□□□ 1.16
HMGB3P22-201ENST00000442010 ZNF865P0CJ78 1059 aaPredicted RBP22.3■■□□□ 1.16
HMGB3P22-201ENST00000442010 TAL1P17542 331 aaPredicted RBP22.3■■□□□ 1.16
HMGB3P22-201ENST00000442010 SLC4A3P48751 1232 aa22.3■■□□□ 1.16
HMGB3P22-201ENST00000442010 NT5C2P49902 561 aa22.3■■□□□ 1.16
HMGB3P22-201ENST00000442010 DDX11Q96FC9 970 aa22.3■■□□□ 1.16
HMGB3P22-201ENST00000442010 AGBL1Q96MI9 1066 aa22.3■■□□□ 1.16
HMGB3P22-201ENST00000442010 ISY1Q9ULR0 285 aaKnown RBP22.3■■□□□ 1.16
HMGB3P22-201ENST00000442010 DNAH12Q6ZR08 3092 aa22.29■■□□□ 1.16
HMGB3P22-201ENST00000442010 IKQ13123 557 aaPredicted RBP22.29■■□□□ 1.16
HMGB3P22-201ENST00000442010 ANO1Q5XXA6 986 aa22.29■■□□□ 1.16
HMGB3P22-201ENST00000442010 TTBK2Q6IQ55 1244 aa22.29■■□□□ 1.16
HMGB3P22-201ENST00000442010 ZNF467Q7Z7K2 595 aaPredicted RBP22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms