RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 UBASH3BQ8TF42 649 aa5.33□□□□□ -1.56
CDC42BPA-207ENST00000441725 PTPRN2Q92932 1015 aa5.33□□□□□ -1.56
CDC42BPA-207ENST00000441725 ZNF587Q96SQ5 575 aaPredicted RBP5.33□□□□□ -1.56
CDC42BPA-207ENST00000441725 TTC1Q99614 292 aa5.33□□□□□ -1.56
CDC42BPA-207ENST00000441725 GP6Q9HCN6 339 aa5.33□□□□□ -1.56
CDC42BPA-207ENST00000441725 NOB1Q9ULX3 412 aaKnown RBP5.33□□□□□ -1.56
CDC42BPA-207ENST00000441725 TRAF6Q9Y4K3 522 aa5.33□□□□□ -1.56
CDC42BPA-207ENST00000441725 TCRBV16S1A1N1A0A5B0 115 aa5.33□□□□□ -1.56
CDC42BPA-207ENST00000441725 KCNH1O95259 989 aa5.33□□□□□ -1.56
CDC42BPA-207ENST00000441725 ADAMTS2O95450 1211 aa5.33□□□□□ -1.56
CDC42BPA-207ENST00000441725 CD68P34810 354 aaPredicted RBP5.33□□□□□ -1.56
CDC42BPA-207ENST00000441725 GFRA1P56159 465 aa5.33□□□□□ -1.56
CDC42BPA-207ENST00000441725 CFAP100Q494V2 611 aa5.33□□□□□ -1.56
CDC42BPA-207ENST00000441725 EXOSC6Q5RKV6 272 aaKnown RBP5.33□□□□□ -1.56
CDC42BPA-207ENST00000441725 NBPF12Q5TAG4 269 aaPredicted RBP5.33□□□□□ -1.56
CDC42BPA-207ENST00000441725 ZBTB46Q86UZ6 589 aa5.33□□□□□ -1.56
CDC42BPA-207ENST00000441725 PPP1R13LQ8WUF5 828 aa5.33□□□□□ -1.56
CDC42BPA-207ENST00000441725 CHMP4CQ96CF2 233 aa5.33□□□□□ -1.56
CDC42BPA-207ENST00000441725 RCC1LQ96I51 464 aaKnown RBP5.33□□□□□ -1.56
CDC42BPA-207ENST00000441725 MPHOSPH6Q99547 160 aaKnown RBP5.33□□□□□ -1.56
CDC42BPA-207ENST00000441725 PUS7LQ9H0K6 701 aaKnown RBP5.33□□□□□ -1.56
CDC42BPA-207ENST00000441725 CRTAC1Q9NQ79 661 aa5.33□□□□□ -1.56
CDC42BPA-207ENST00000441725 CGGBP1Q9UFW8 167 aaPredicted RBP5.33□□□□□ -1.56
CDC42BPA-207ENST00000441725 DLL1O00548 723 aa5.32□□□□□ -1.56
CDC42BPA-207ENST00000441725 PLIN1O60240 522 aa5.32□□□□□ -1.56
CDC42BPA-207ENST00000441725 AUHQ13825 339 aaKnown RBP5.32□□□□□ -1.56
CDC42BPA-207ENST00000441725 PRSS53Q2L4Q9 553 aa5.32□□□□□ -1.56
CDC42BPA-207ENST00000441725 ZNF385CQ66K41 422 aaPredicted RBP5.32□□□□□ -1.56
CDC42BPA-207ENST00000441725 POMZP3Q6PJE2 187 aa5.32□□□□□ -1.56
CDC42BPA-207ENST00000441725 SLCO4C1Q6ZQN7 724 aa5.32□□□□□ -1.56
CDC42BPA-207ENST00000441725 CDC37L1Q7L3B6 337 aa5.32□□□□□ -1.56
CDC42BPA-207ENST00000441725 C7orf61Q8IZ16 206 aa5.32□□□□□ -1.56
CDC42BPA-207ENST00000441725 ARHGEF39Q8N4T4 335 aa5.32□□□□□ -1.56
CDC42BPA-207ENST00000441725 PI4K2BQ8TCG2 481 aa5.32□□□□□ -1.56
CDC42BPA-207ENST00000441725 USP7Q93009 1102 aa5.32□□□□□ -1.56
CDC42BPA-207ENST00000441725 IFT22Q9H7X7 185 aa5.32□□□□□ -1.56
CDC42BPA-207ENST00000441725 PRDM10Q9NQV6 1147 aa5.32□□□□□ -1.56
CDC42BPA-207ENST00000441725 AP4E1Q9UPM8 1137 aa5.32□□□□□ -1.56
CDC42BPA-207ENST00000441725 TNKSO95271 1327 aa5.32□□□□□ -1.56
CDC42BPA-207ENST00000441725 ASXL2Q76L83 1435 aa5.32□□□□□ -1.56
CDC42BPA-207ENST00000441725 CREB3O43889 395 aa5.32□□□□□ -1.56
CDC42BPA-207ENST00000441725 APBA3O96018 575 aa5.32□□□□□ -1.56
CDC42BPA-207ENST00000441725 CST3P01034 146 aaPredicted RBP5.32□□□□□ -1.56
CDC42BPA-207ENST00000441725 EPXP11678 715 aa5.32□□□□□ -1.56
CDC42BPA-207ENST00000441725 CDCA2Q69YH5 1023 aaPredicted RBP5.32□□□□□ -1.56
CDC42BPA-207ENST00000441725 GTF2IRD2BQ6EKJ0 949 aa5.32□□□□□ -1.56
CDC42BPA-207ENST00000441725 GTF2IRD2Q86UP8 949 aa5.32□□□□□ -1.56
CDC42BPA-207ENST00000441725 PASD1Q8IV76 773 aa5.32□□□□□ -1.56
CDC42BPA-207ENST00000441725 DMRTC2Q8IXT2 367 aaPredicted RBP5.32□□□□□ -1.56
CDC42BPA-207ENST00000441725 TMEM145Q8NBT3 493 aa5.32□□□□□ -1.56
CDC42BPA-207ENST00000441725 KCTD13Q8WZ19 329 aa5.32□□□□□ -1.56
CDC42BPA-207ENST00000441725 ISL2Q96A47 359 aa5.32□□□□□ -1.56
CDC42BPA-207ENST00000441725 VWCEQ96DN2 955 aa5.32□□□□□ -1.56
CDC42BPA-207ENST00000441725 MAGEB10Q96LZ2 347 aaPredicted RBP5.32□□□□□ -1.56
CDC42BPA-207ENST00000441725 ZNF180Q9UJW8 692 aa5.32□□□□□ -1.56
CDC42BPA-207ENST00000441725 NSFL1CQ9UNZ2 370 aaKnown RBP5.32□□□□□ -1.56
CDC42BPA-207ENST00000441725 COL17A1Q9UMD9 1497 aaPredicted RBP5.32□□□□□ -1.56
CDC42BPA-207ENST00000441725 DEAF1O75398 565 aaPredicted RBP5.31□□□□□ -1.56
CDC42BPA-207ENST00000441725 CRTAMO95727 393 aa5.31□□□□□ -1.56
CDC42BPA-207ENST00000441725 MYL1P05976 194 aa5.31□□□□□ -1.56
CDC42BPA-207ENST00000441725 ITGA4P13612 1032 aa5.31□□□□□ -1.56
CDC42BPA-207ENST00000441725 BPIP17213 487 aa5.31□□□□□ -1.56
CDC42BPA-207ENST00000441725 CAP2P40123 477 aa5.31□□□□□ -1.56
CDC42BPA-207ENST00000441725 ZNF445P59923 1031 aa5.31□□□□□ -1.56
CDC42BPA-207ENST00000441725 MLC1Q15049 377 aa5.31□□□□□ -1.56
CDC42BPA-207ENST00000441725 FAM102BQ5T8I3 360 aa5.31□□□□□ -1.56
CDC42BPA-207ENST00000441725 PIK3R6Q5UE93 754 aa5.31□□□□□ -1.56
CDC42BPA-207ENST00000441725 SYDE2Q5VT97 1194 aa5.31□□□□□ -1.56
CDC42BPA-207ENST00000441725 C1orf229Q6ZS94 237 aaPredicted RBP5.31□□□□□ -1.56
CDC42BPA-207ENST00000441725 TSHZ1Q6ZSZ6 1077 aa5.31□□□□□ -1.56
CDC42BPA-207ENST00000441725 TCEAL8Q8IYN2 117 aa5.31□□□□□ -1.56
CDC42BPA-207ENST00000441725 GOLGA6L1Q8N7Z2 621 aa5.31□□□□□ -1.56
CDC42BPA-207ENST00000441725 WHAMMQ8TF30 809 aa5.31□□□□□ -1.56
CDC42BPA-207ENST00000441725 C1orf159Q96HA4 380 aa5.31□□□□□ -1.56
CDC42BPA-207ENST00000441725 RHOBTB2Q9BYZ6 727 aa5.31□□□□□ -1.56
CDC42BPA-207ENST00000441725 NOL6Q9H6R4 1146 aaKnown RBP5.31□□□□□ -1.56
CDC42BPA-207ENST00000441725 IGF1RP08069 1367 aa5.31□□□□□ -1.56
CDC42BPA-207ENST00000441725 M0R2C6 588 aa5.31□□□□□ -1.56
CDC42BPA-207ENST00000441725 FLT3P36888 993 aa5.31□□□□□ -1.56
CDC42BPA-207ENST00000441725 KCNJ6P48051 423 aa5.31□□□□□ -1.56
CDC42BPA-207ENST00000441725 MAP4K2Q12851 820 aa5.31□□□□□ -1.56
CDC42BPA-207ENST00000441725 PPP4R4Q6NUP7 873 aa5.31□□□□□ -1.56
CDC42BPA-207ENST00000441725 ABHD17CQ6PCB6 329 aa5.31□□□□□ -1.56
CDC42BPA-207ENST00000441725 SLC4A10Q6U841 1118 aa5.31□□□□□ -1.56
CDC42BPA-207ENST00000441725 ILDR2Q71H61 639 aa5.31□□□□□ -1.56
CDC42BPA-207ENST00000441725 MAMDC2Q7Z304 686 aaPredicted RBP5.31□□□□□ -1.56
CDC42BPA-207ENST00000441725 SVOPQ8N4V2 548 aa5.31□□□□□ -1.56
CDC42BPA-207ENST00000441725 CRACR2BQ8N4Y2 399 aaPredicted RBP5.31□□□□□ -1.56
CDC42BPA-207ENST00000441725 WNK4Q96J92 1243 aa5.31□□□□□ -1.56
CDC42BPA-207ENST00000441725 TMPRSS13Q9BYE2 586 aa5.31□□□□□ -1.56
CDC42BPA-207ENST00000441725 NKX2-4Q9H2Z4 354 aa5.31□□□□□ -1.56
CDC42BPA-207ENST00000441725 ATXN3LQ9H3M9 355 aa5.31□□□□□ -1.56
CDC42BPA-207ENST00000441725 PCDHA9Q9Y5H5 950 aa5.31□□□□□ -1.56
CDC42BPA-207ENST00000441725 E2F8A0AVK6 867 aa5.3□□□□□ -1.56
CDC42BPA-207ENST00000441725 ZNF891A8MT65 544 aaPredicted RBP5.3□□□□□ -1.56
CDC42BPA-207ENST00000441725 RBAK-RBAKDNI3L0D1 243 aa5.3□□□□□ -1.56
CDC42BPA-207ENST00000441725 ABLIM3O94929 683 aa5.3□□□□□ -1.56
CDC42BPA-207ENST00000441725 SNRPB2P08579 225 aaKnown RBP5.3□□□□□ -1.56
CDC42BPA-207ENST00000441725 PYGMP11217 842 aa5.3□□□□□ -1.56
CDC42BPA-207ENST00000441725 CYP4F3Q08477 520 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms