RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 RARAP10276 462 aa6.83□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 GPSM2P81274 684 aa6.83□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 HYAL2Q12891 473 aa6.83□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 TRIM29Q14134 588 aa6.83□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 NCOA1Q15788 1441 aa6.83□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 FAM133BQ5BKY9 247 aaKnown RBP6.83□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 FOXB2Q5VYV0 432 aa6.83□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 IQCEQ6IPM2 695 aa6.83□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 C16orf87Q6PH81 154 aa6.83□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 AHI1Q8N157 1196 aa6.83□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 PPHLN1Q8NEY8 458 aaKnown RBP6.83□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 EXOC2Q96KP1 924 aa6.83□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 TRERF1Q96PN7 1200 aa6.83□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 YIPF4Q9BSR8 244 aa6.83□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 BHLHE41Q9C0J9 482 aaPredicted RBP6.83□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 CCDC8Q9H0W5 538 aaPredicted RBP6.83□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 TAGLN3Q9UI15 199 aa6.83□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 MAFFQ9ULX9 164 aa6.83□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 POLR3KQ9Y2Y1 108 aaPredicted RBP6.83□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 CROCC2H7BZ55 1655 aa6.83□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 ANKRD30BQ9BXX2 1392 aa6.83□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 ANKRD30AQ9BXX3 1397 aa6.83□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 ATP10BO94823 1461 aa6.83□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 MPHOSPH10O00566 681 aaKnown RBP6.83□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 WNT7AO00755 349 aa6.83□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 FRAT2O75474 233 aaPredicted RBP6.83□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 PSAPP07602 524 aa6.83□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 IFIT2P09913 472 aaKnown RBP6.83□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 ZNF132P52740 706 aa6.83□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 POU4F2Q12837 409 aa6.83□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 CCINQ13939 588 aa6.83□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 DNAJC21Q5F1R6 531 aaKnown RBP6.83□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 DNTTIP2Q5QJE6 756 aaKnown RBP6.83□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 LMBRD2Q68DH5 695 aaPredicted RBP6.83□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 LLGL2Q6P1M3 1020 aa6.83□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 KIAA1211Q6ZU35 1233 aa6.83□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 DGKHQ86XP1 1220 aa6.83□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 MAGEB6Q8N7X4 407 aa6.83□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 FBXO41Q8TF61 875 aa6.83□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 RPGRQ92834 1020 aaKnown RBP6.83□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 BORCS6Q96GS4 357 aa6.83□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 RTFDC1Q9BY42 306 aaPredicted RBP6.83□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 PHAXQ9H814 394 aaKnown RBP6.83□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 ZFAND3Q9H8U3 227 aa6.83□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 CBX8Q9HC52 389 aa6.83□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 KAT6BQ8WYB5 2073 aa6.83□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 ADGRL2O95490 1459 aa6.83□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 RPRD2Q5VT52 1461 aaKnown RBP6.83□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 CDC42BPAQ5VT25 1732 aa6.83□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 PTPRGP23470 1445 aa6.82□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 MEIS3P2A8K0S8 358 aa6.82□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 PRRT4C9JH25 899 aa6.82□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 ZSCAN20P17040 1043 aaPredicted RBP6.82□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 NME2P22392 152 aa6.82□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 KIAA1211LQ6NV74 962 aa6.82□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 STK11IPQ8N1F8 1099 aa6.82□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 TMEM40Q8WWA1 233 aa6.82□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 DDX1Q92499 740 aaKnown RBP6.82□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 SMARCC1Q92922 1105 aaPredicted RBP6.82□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 SKA1Q96BD8 255 aa6.82□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 CAMKK2Q96RR4 588 aa6.82□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 INSM2Q96T92 566 aaPredicted RBP6.82□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 SELENOOQ9BVL4 669 aa6.82□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 ZCCHC2Q9C0B9 1178 aaKnown RBP6.82□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 LGR6Q9HBX8 967 aa6.82□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 GTF2A1LQ9UNN4 478 aa6.82□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 IKBKGQ9Y6K9 419 aa6.82□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 A0A1B0GTH6 734 aa6.82□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 HNRNPCP07910 306 aaKnown RBP eCLIP6.82□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 SDSP20132 328 aa6.82□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 TSPAN7P41732 249 aa6.82□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 RIPK4P57078 832 aa6.82□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 WDR4P57081 412 aaKnown RBP6.82□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 FAM209AQ5JX71 171 aa6.82□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 MFSD4BQ5TF39 518 aa6.82□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 ANO1Q5XXA6 986 aa6.82□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 ARHGEF25Q86VW2 580 aa6.82□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 TBC1D31Q96DN5 1066 aa6.82□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 TMEM87BQ96K49 555 aa6.82□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 PNMA5Q96PV4 448 aa6.82□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 POLMQ9NP87 494 aaPredicted RBP6.82□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 PCDHB10Q9UN67 800 aa6.82□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 RABL2BQ9UNT1 228 aa6.82□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 GPR39O43194 453 aa6.81□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 BRINP1O60477 761 aa6.81□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 CCDC175P0C221 793 aa6.81□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 HSPA5P11021 654 aaKnown RBP6.81□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 MSX1P28360 303 aa6.81□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 SOX18P35713 384 aa6.81□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 NUCB1Q02818 461 aa6.81□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 MORC3Q14149 939 aa6.81□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 MLECQ14165 292 aa6.81□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 MAP7Q14244 749 aa6.81□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 CCDC158Q5M9N0 1113 aa6.81□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 COL13A1Q5TAT6 717 aaPredicted RBP6.81□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 WAPLQ7Z5K2 1190 aa6.81□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 TAB3Q8N5C8 712 aaPredicted RBP6.81□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 ARL6IP6Q8N6S5 226 aa6.81□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 ANKRD42Q8N9B4 389 aa6.81□□□□□ -1.32
ALMS1-IT1-201ENST00000441587 NXPE3Q969Y0 559 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms