RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 CHMP5Q9NZZ3 219 aa24.41■■□□□ 1.5
VPS13B-204ENST00000441350 PKP1Q13835 747 aa24.4■■□□□ 1.5
VPS13B-204ENST00000441350 PFKFB3Q16875 520 aaPredicted RBP24.4■■□□□ 1.5
VPS13B-204ENST00000441350 SYDE2Q5VT97 1194 aa24.4■■□□□ 1.5
VPS13B-204ENST00000441350 CHURC1Q8WUH1 139 aa24.4■■□□□ 1.5
VPS13B-204ENST00000441350 RRP36Q96EU6 259 aaKnown RBP24.4■■□□□ 1.5
VPS13B-204ENST00000441350 FEM1BQ9UK73 627 aa24.4■■□□□ 1.5
VPS13B-204ENST00000441350 PDIA4P13667 645 aaKnown RBP24.39■■□□□ 1.5
VPS13B-204ENST00000441350 HUNKP57058 714 aa24.39■■□□□ 1.5
VPS13B-204ENST00000441350 FAM160B2Q86V87 743 aa24.39■■□□□ 1.5
VPS13B-204ENST00000441350 RGS22Q8NE09 1264 aa24.39■■□□□ 1.5
VPS13B-204ENST00000441350 PIBF1Q8WXW3 757 aa24.39■■□□□ 1.5
VPS13B-204ENST00000441350 WNK4Q96J92 1243 aa24.39■■□□□ 1.5
VPS13B-204ENST00000441350 PIGSQ96S52 555 aa24.39■■□□□ 1.5
VPS13B-204ENST00000441350 RPAP3Q9H6T3 665 aaPredicted RBP24.39■■□□□ 1.5
VPS13B-204ENST00000441350 LOC285556D6RIA3 1793 aa24.39■■□□□ 1.5
VPS13B-204ENST00000441350 STX6O43752 255 aa24.39■■□□□ 1.49
VPS13B-204ENST00000441350 SCG2P13521 617 aa24.39■■□□□ 1.49
VPS13B-204ENST00000441350 FSTL1Q12841 308 aa24.39■■□□□ 1.49
VPS13B-204ENST00000441350 PRR12Q9ULL5 1215 aa24.39■■□□□ 1.49
VPS13B-204ENST00000441350 NUCB2P80303 420 aa24.38■■□□□ 1.49
VPS13B-204ENST00000441350 SAPCD2Q86UD0 394 aa24.38■■□□□ 1.49
VPS13B-204ENST00000441350 FBXO18Q8NFZ0 1043 aa24.38■■□□□ 1.49
VPS13B-204ENST00000441350 C8orf76Q96K31 380 aa24.38■■□□□ 1.49
VPS13B-204ENST00000441350 FBXO28Q9NVF7 368 aa24.38■■□□□ 1.49
VPS13B-204ENST00000441350 ZDHHC9Q9Y397 364 aa24.38■■□□□ 1.49
VPS13B-204ENST00000441350 IKQ13123 557 aaPredicted RBP24.37■■□□□ 1.49
VPS13B-204ENST00000441350 PROCA1Q8NCQ7 364 aaPredicted RBP24.37■■□□□ 1.49
VPS13B-204ENST00000441350 TANGO6Q9C0B7 1094 aa24.37■■□□□ 1.49
VPS13B-204ENST00000441350 GJB4Q9NTQ9 266 aa24.37■■□□□ 1.49
VPS13B-204ENST00000441350 SEC63Q9UGP8 760 aaKnown RBP24.37■■□□□ 1.49
VPS13B-204ENST00000441350 MTMR6Q9Y217 621 aa24.37■■□□□ 1.49
VPS13B-204ENST00000441350 PARP14Q460N5 1801 aa24.37■■□□□ 1.49
VPS13B-204ENST00000441350 PNMA6FA0A0J9YX94 578 aa24.36■■□□□ 1.49
VPS13B-204ENST00000441350 MOGSQ13724 837 aa24.36■■□□□ 1.49
VPS13B-204ENST00000441350 HOMER1Q86YM7 354 aa24.36■■□□□ 1.49
VPS13B-204ENST00000441350 SHISA4Q96DD7 197 aa24.36■■□□□ 1.49
VPS13B-204ENST00000441350 RLFQ13129 1914 aa24.36■■□□□ 1.49
VPS13B-204ENST00000441350 ZBTB5O15062 677 aa24.35■■□□□ 1.49
VPS13B-204ENST00000441350 BRD1O95696 1058 aa24.35■■□□□ 1.49
VPS13B-204ENST00000441350 FOSBP53539 338 aa24.35■■□□□ 1.49
VPS13B-204ENST00000441350 SNAPC2Q13487 334 aa24.35■■□□□ 1.49
VPS13B-204ENST00000441350 SPRYD7Q5W111 196 aa24.35■■□□□ 1.49
VPS13B-204ENST00000441350 PRPF38AQ8NAV1 312 aaKnown RBP24.35■■□□□ 1.49
VPS13B-204ENST00000441350 SLF1Q9BQI6 1058 aa24.35■■□□□ 1.49
VPS13B-204ENST00000441350 WDR33Q9C0J8 1336 aaKnown RBP24.35■■□□□ 1.49
VPS13B-204ENST00000441350 CATSPERGQ6ZRH7 1159 aa24.35■■□□□ 1.49
VPS13B-204ENST00000441350 KIFC2Q96AC6 838 aa24.35■■□□□ 1.49
VPS13B-204ENST00000441350 TLL2Q9Y6L7 1015 aa24.35■■□□□ 1.49
VPS13B-204ENST00000441350 VPS37CA5D8V6 355 aaPredicted RBP24.34■■□□□ 1.49
VPS13B-204ENST00000441350 USP17L15C9J2P7 530 aa24.34■■□□□ 1.49
VPS13B-204ENST00000441350 USP17L13C9JLJ4 530 aa24.34■■□□□ 1.49
VPS13B-204ENST00000441350 USP17L11C9JVI0 530 aa24.34■■□□□ 1.49
VPS13B-204ENST00000441350 USP17L18D6R9N7 530 aa24.34■■□□□ 1.49
VPS13B-204ENST00000441350 USP17L22D6RA61 530 aa24.34■■□□□ 1.49
VPS13B-204ENST00000441350 USP17L17D6RBQ6 530 aa24.34■■□□□ 1.49
VPS13B-204ENST00000441350 USP17L19D6RCP7 530 aa24.34■■□□□ 1.49
VPS13B-204ENST00000441350 USP17L20D6RJB6 530 aa24.34■■□□□ 1.49
VPS13B-204ENST00000441350 H3BQV1 296 aa24.34■■□□□ 1.49
VPS13B-204ENST00000441350 ZBTB48P10074 688 aaPredicted RBP24.34■■□□□ 1.49
VPS13B-204ENST00000441350 USP17L24Q0WX57 530 aa24.34■■□□□ 1.49
VPS13B-204ENST00000441350 CDC37Q16543 378 aaPredicted RBP24.34■■□□□ 1.49
VPS13B-204ENST00000441350 QRICH1Q2TAL8 776 aa24.34■■□□□ 1.49
VPS13B-204ENST00000441350 TREML2Q5T2D2 321 aa24.34■■□□□ 1.49
VPS13B-204ENST00000441350 IFFO2Q5TF58 517 aa24.34■■□□□ 1.49
VPS13B-204ENST00000441350 KRT40Q6A162 431 aa24.34■■□□□ 1.49
VPS13B-204ENST00000441350 WWC2Q6AWC2 1192 aa24.34■■□□□ 1.49
VPS13B-204ENST00000441350 OTUD7BQ6GQQ9 843 aa24.34■■□□□ 1.49
VPS13B-204ENST00000441350 GPKOWQ92917 476 aaPredicted RBP eCLIP24.34■■□□□ 1.49
VPS13B-204ENST00000441350 SH3GLB2Q9NR46 395 aa24.34■■□□□ 1.49
VPS13B-204ENST00000441350 BARHL2Q9NY43 387 aa24.34■■□□□ 1.49
VPS13B-204ENST00000441350 VPS54Q9P1Q0 977 aa24.34■■□□□ 1.49
VPS13B-204ENST00000441350 PPP1R9AQ9ULJ8 1098 aa24.34■■□□□ 1.49
VPS13B-204ENST00000441350 TMEM88BA6NKF7 163 aa24.33■■□□□ 1.49
VPS13B-204ENST00000441350 PPP1R11O60927 126 aaPredicted RBP24.33■■□□□ 1.49
VPS13B-204ENST00000441350 FLOT1O75955 427 aa24.33■■□□□ 1.49
VPS13B-204ENST00000441350 GUCY1B3Q02153 619 aa24.33■■□□□ 1.49
VPS13B-204ENST00000441350 GADL1Q6ZQY3 521 aa24.33■■□□□ 1.49
VPS13B-204ENST00000441350 FASTKD5Q7L8L6 764 aaKnown RBP24.33■■□□□ 1.49
VPS13B-204ENST00000441350 MS4A4AQ96JQ5 239 aa24.33■■□□□ 1.49
VPS13B-204ENST00000441350 RANBP17Q9H2T7 1088 aaKnown RBP24.33■■□□□ 1.49
VPS13B-204ENST00000441350 STXBP3O00186 592 aa24.32■■□□□ 1.48
VPS13B-204ENST00000441350 ZSCAN22P10073 491 aaPredicted RBP24.32■■□□□ 1.48
VPS13B-204ENST00000441350 XBP1P17861 261 aa24.32■■□□□ 1.48
VPS13B-204ENST00000441350 HOXA7P31268 230 aaPredicted RBP24.32■■□□□ 1.48
VPS13B-204ENST00000441350 TRIM29Q14134 588 aa24.32■■□□□ 1.48
VPS13B-204ENST00000441350 HEATR3Q7Z4Q2 680 aa24.32■■□□□ 1.48
VPS13B-204ENST00000441350 FAM177A1Q8N128 213 aaPredicted RBP24.32■■□□□ 1.48
VPS13B-204ENST00000441350 hCG_1984214I3L0E3 225 aa24.32■■□□□ 1.48
VPS13B-204ENST00000441350 GTF2A2P52657 109 aa24.32■■□□□ 1.48
VPS13B-204ENST00000441350 SNAP25P60880 206 aa24.32■■□□□ 1.48
VPS13B-204ENST00000441350 TYW1BQ6NUM6 668 aa24.32■■□□□ 1.48
VPS13B-204ENST00000441350 RGMBQ6NW40 437 aa24.32■■□□□ 1.48
VPS13B-204ENST00000441350 RASAL3Q86YV0 1011 aa24.32■■□□□ 1.48
VPS13B-204ENST00000441350 ZNF713Q8N859 430 aaPredicted RBP24.32■■□□□ 1.48
VPS13B-204ENST00000441350 AGTPBP1Q9UPW5 1226 aa24.32■■□□□ 1.48
VPS13B-204ENST00000441350 ZNF157P51786 506 aaPredicted RBP24.31■■□□□ 1.48
VPS13B-204ENST00000441350 COG2Q14746 738 aa24.31■■□□□ 1.48
VPS13B-204ENST00000441350 GPAT2Q6NUI2 795 aa24.31■■□□□ 1.48
VPS13B-204ENST00000441350 PHF20Q9BVI0 1012 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms