RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 NEDD1Q8NHV4 660 aa24.7■■□□□ 1.54
CPNE1-219ENST00000440240 SEC62Q99442 399 aaKnown RBP24.7■■□□□ 1.54
CPNE1-219ENST00000440240 NAPBQ9H115 298 aa24.7■■□□□ 1.54
CPNE1-219ENST00000440240 ZBTB47Q9UFB7 747 aaPredicted RBP24.7■■□□□ 1.54
CPNE1-219ENST00000440240 GREB1LQ9C091 1923 aaPredicted RBP24.69■■□□□ 1.54
CPNE1-219ENST00000440240 TSPY3P0CV98 308 aa24.69■■□□□ 1.54
CPNE1-219ENST00000440240 TSPY8P0CW00 308 aa24.69■■□□□ 1.54
CPNE1-219ENST00000440240 MX1P20591 662 aa24.69■■□□□ 1.54
CPNE1-219ENST00000440240 SNX17Q15036 470 aa24.69■■□□□ 1.54
CPNE1-219ENST00000440240 ZMYM1Q5SVZ6 1142 aa24.69■■□□□ 1.54
CPNE1-219ENST00000440240 CPXCR1Q8N123 301 aa24.69■■□□□ 1.54
CPNE1-219ENST00000440240 GMCL1P1Q8NEA9 526 aa24.69■■□□□ 1.54
CPNE1-219ENST00000440240 FERMT2Q96AC1 680 aa24.69■■□□□ 1.54
CPNE1-219ENST00000440240 KIFC2Q96AC6 838 aa24.69■■□□□ 1.54
CPNE1-219ENST00000440240 RIPK3Q9Y572 518 aa24.69■■□□□ 1.54
CPNE1-219ENST00000440240 COL11A1P12107 1806 aaPredicted RBP24.69■■□□□ 1.54
CPNE1-219ENST00000440240 ZNF865P0CJ78 1059 aaPredicted RBP24.68■■□□□ 1.54
CPNE1-219ENST00000440240 AKR1A1P14550 325 aa24.68■■□□□ 1.54
CPNE1-219ENST00000440240 OTUD7AQ8TE49 926 aaPredicted RBP24.68■■□□□ 1.54
CPNE1-219ENST00000440240 SLC38A10Q9HBR0 1119 aa24.68■■□□□ 1.54
CPNE1-219ENST00000440240 PHF24Q9UPV7 400 aa24.68■■□□□ 1.54
CPNE1-219ENST00000440240 FDX1P10109 184 aa24.67■■□□□ 1.54
CPNE1-219ENST00000440240 TAL1P17542 331 aaPredicted RBP24.67■■□□□ 1.54
CPNE1-219ENST00000440240 SLC4A3P48751 1232 aa24.67■■□□□ 1.54
CPNE1-219ENST00000440240 TFAP4Q01664 338 aa24.67■■□□□ 1.54
CPNE1-219ENST00000440240 PPARAQ07869 468 aa24.67■■□□□ 1.54
CPNE1-219ENST00000440240 TRIM60Q495X7 471 aa24.67■■□□□ 1.54
CPNE1-219ENST00000440240 PPP4R3BQ5MIZ7 849 aa24.67■■□□□ 1.54
CPNE1-219ENST00000440240 SLC17A8Q8NDX2 589 aa24.67■■□□□ 1.54
CPNE1-219ENST00000440240 FBXO40Q9UH90 709 aa24.67■■□□□ 1.54
CPNE1-219ENST00000440240 SYNGAP1Q96PV0 1343 aa24.66■■□□□ 1.54
CPNE1-219ENST00000440240 SMCHD1A6NHR9 2005 aa24.66■■□□□ 1.54
CPNE1-219ENST00000440240 COL6A3P12111 3177 aa24.66■■□□□ 1.54
CPNE1-219ENST00000440240 DNAJC25-GNG10A0A024R161 153 aa24.66■■□□□ 1.54
CPNE1-219ENST00000440240 PGK1P00558 417 aa24.66■■□□□ 1.54
CPNE1-219ENST00000440240 OAZ1P54368 228 aa24.66■■□□□ 1.54
CPNE1-219ENST00000440240 SLFN13Q68D06 897 aa24.66■■□□□ 1.54
CPNE1-219ENST00000440240 MAMDC4Q6UXC1 1216 aa24.66■■□□□ 1.54
CPNE1-219ENST00000440240 ZNF467Q7Z7K2 595 aaPredicted RBP24.66■■□□□ 1.54
CPNE1-219ENST00000440240 RAVER2Q9HCJ3 691 aaKnown RBP24.66■■□□□ 1.54
CPNE1-219ENST00000440240 PRDM5Q9NQX1 630 aaPredicted RBP24.66■■□□□ 1.54
CPNE1-219ENST00000440240 FAM184BQ9ULE4 1060 aa24.66■■□□□ 1.54
CPNE1-219ENST00000440240 BMP3P12645 472 aa24.65■■□□□ 1.54
CPNE1-219ENST00000440240 Q7L0L9 218 aa24.65■■□□□ 1.54
CPNE1-219ENST00000440240 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.65■■□□□ 1.543e-8■□□□□ 9.3
CPNE1-219ENST00000440240 LRRC47Q8N1G4 583 aaKnown RBP24.65■■□□□ 1.54
CPNE1-219ENST00000440240 CHST13Q8NET6 341 aa24.65■■□□□ 1.54
CPNE1-219ENST00000440240 MTMR10Q9NXD2 777 aa24.65■■□□□ 1.54
CPNE1-219ENST00000440240 PLIN4Q96Q06 1357 aa24.65■■□□□ 1.54
CPNE1-219ENST00000440240 SNAI1O95863 264 aaPredicted RBP24.64■■□□□ 1.54
CPNE1-219ENST00000440240 ANKRD35Q8N283 1001 aa24.64■■□□□ 1.54
CPNE1-219ENST00000440240 CHURC1Q8WUH1 139 aa24.64■■□□□ 1.54
CPNE1-219ENST00000440240 TSEN34Q9BSV6 310 aaKnown RBP24.64■■□□□ 1.54
CPNE1-219ENST00000440240 TACC3Q9Y6A5 838 aa24.64■■□□□ 1.54
CPNE1-219ENST00000440240 RRP1P56182 461 aaKnown RBP24.63■■□□□ 1.53
CPNE1-219ENST00000440240 TLE2Q04725 743 aa24.63■■□□□ 1.53
CPNE1-219ENST00000440240 ANKRD45Q5TZF3 282 aa24.63■■□□□ 1.53
CPNE1-219ENST00000440240 FAM109BQ6ICB4 259 aaPredicted RBP24.63■■□□□ 1.53
CPNE1-219ENST00000440240 PDLIM7Q9NR12 457 aa24.63■■□□□ 1.53
CPNE1-219ENST00000440240 STXBP5LQ9Y2K9 1186 aa24.63■■□□□ 1.53
CPNE1-219ENST00000440240 TMEM232C9JQI7 657 aa24.62■■□□□ 1.53
CPNE1-219ENST00000440240 STAT2P52630 851 aa24.62■■□□□ 1.53
CPNE1-219ENST00000440240 FAM160B2Q86V87 743 aa24.62■■□□□ 1.53
CPNE1-219ENST00000440240 EVI5LQ96CN4 794 aa24.62■■□□□ 1.53
CPNE1-219ENST00000440240 GMCL1Q96IK5 515 aa24.62■■□□□ 1.53
CPNE1-219ENST00000440240 POTEB2H3BUK9 544 aa24.61■■□□□ 1.53
CPNE1-219ENST00000440240 ADAMTS4O75173 837 aa24.61■■□□□ 1.53
CPNE1-219ENST00000440240 NUP133Q8WUM0 1156 aa24.61■■□□□ 1.53
CPNE1-219ENST00000440240 STAG1Q8WVM7 1258 aa24.61■■□□□ 1.53
CPNE1-219ENST00000440240 BADQ92934 168 aa24.61■■□□□ 1.53
CPNE1-219ENST00000440240 ABHD16BQ9H3Z7 469 aa24.61■■□□□ 1.53
CPNE1-219ENST00000440240 ISY1Q9ULR0 285 aaKnown RBP24.61■■□□□ 1.53
CPNE1-219ENST00000440240 PLXNA1Q9UIW2 1896 aa24.61■■□□□ 1.53
CPNE1-219ENST00000440240 SALL3Q9BXA9 1300 aa24.61■■□□□ 1.53
CPNE1-219ENST00000440240 A0A1W2PQ45 241 aaPredicted RBP24.6■■□□□ 1.53
CPNE1-219ENST00000440240 A0A1W2PQY0 241 aa24.6■■□□□ 1.53
CPNE1-219ENST00000440240 TSPY2A6NKD2 308 aa24.6■■□□□ 1.53
CPNE1-219ENST00000440240 DUSP11O75319 330 aaKnown RBP24.6■■□□□ 1.53
CPNE1-219ENST00000440240 SLC1A4P43007 532 aa24.6■■□□□ 1.53
CPNE1-219ENST00000440240 ACVR2BQ13705 512 aa24.6■■□□□ 1.53
CPNE1-219ENST00000440240 SH3RF1Q7Z6J0 888 aa24.6■■□□□ 1.53
CPNE1-219ENST00000440240 ZHX1Q9UKY1 873 aaPredicted RBP24.6■■□□□ 1.53
CPNE1-219ENST00000440240 STX8Q9UNK0 236 aa24.6■■□□□ 1.53
CPNE1-219ENST00000440240 MYH4Q9Y623 1939 aa24.6■■□□□ 1.53
CPNE1-219ENST00000440240 A0A0C4DFX4 3053 aa24.59■■□□□ 1.53
CPNE1-219ENST00000440240 TRIM43BA6NCK2 446 aa24.59■■□□□ 1.53
CPNE1-219ENST00000440240 MOXD2PA6NHM9 499 aa24.59■■□□□ 1.53
CPNE1-219ENST00000440240 PLA2G6O60733 806 aa24.59■■□□□ 1.53
CPNE1-219ENST00000440240 MCCP23508 829 aa24.59■■□□□ 1.53
CPNE1-219ENST00000440240 ACLYP53396 1101 aa24.59■■□□□ 1.53
CPNE1-219ENST00000440240 IKQ13123 557 aaPredicted RBP24.59■■□□□ 1.53
CPNE1-219ENST00000440240 SHHQ15465 462 aa24.59■■□□□ 1.53
CPNE1-219ENST00000440240 TICAM2Q86XR7 235 aa24.59■■□□□ 1.53
CPNE1-219ENST00000440240 TRIM43Q96BQ3 446 aaPredicted RBP24.59■■□□□ 1.53
CPNE1-219ENST00000440240 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.59■■□□□ 1.53
CPNE1-219ENST00000440240 ANAPC4Q9UJX5 808 aa24.59■■□□□ 1.53
CPNE1-219ENST00000440240 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.59■■□□□ 1.53
CPNE1-219ENST00000440240 SYNRGQ9UMZ2 1314 aa24.59■■□□□ 1.53
CPNE1-219ENST00000440240 LAMA2P24043 3122 aaKnown RBP24.58■■□□□ 1.53
CPNE1-219ENST00000440240 CLTBP09497 229 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms