RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 LAD1O00515 517 aa11.82□□□□□ -0.52
CPNE1-218ENST00000439806 ADAMTS3O15072 1205 aa11.82□□□□□ -0.52
CPNE1-218ENST00000439806 CYTH3O43739 400 aa11.82□□□□□ -0.52
CPNE1-218ENST00000439806 SRGNP10124 158 aa11.82□□□□□ -0.52
CPNE1-218ENST00000439806 GNA11P29992 359 aa11.82□□□□□ -0.52
CPNE1-218ENST00000439806 STAT6P42226 847 aa11.82□□□□□ -0.52
CPNE1-218ENST00000439806 NONOQ15233 471 aaKnown RBP eCLIP11.82□□□□□ -0.52
CPNE1-218ENST00000439806 E2F4Q16254 413 aa11.82□□□□□ -0.52
CPNE1-218ENST00000439806 INF2Q27J81 1249 aa11.82□□□□□ -0.52
CPNE1-218ENST00000439806 SLC35G1Q2M3R5 365 aa11.82□□□□□ -0.52
CPNE1-218ENST00000439806 HSP90AA4PQ58FG1 418 aa11.82□□□□□ -0.52
CPNE1-218ENST00000439806 SPATA1Q5VX52 437 aa11.82□□□□□ -0.52
CPNE1-218ENST00000439806 KLHL10Q6JEL2 608 aa11.82□□□□□ -0.52
CPNE1-218ENST00000439806 TYW1BQ6NUM6 668 aa11.82□□□□□ -0.52
CPNE1-218ENST00000439806 DTHD1Q6ZMT9 781 aa11.82□□□□□ -0.52
CPNE1-218ENST00000439806 COL23A1Q86Y22 540 aaPredicted RBP11.82□□□□□ -0.52
CPNE1-218ENST00000439806 HOMER1Q86YM7 354 aa11.82□□□□□ -0.52
CPNE1-218ENST00000439806 CEP95Q96GE4 821 aa11.82□□□□□ -0.52
CPNE1-218ENST00000439806 USP40Q9NVE5 1235 aa11.82□□□□□ -0.52
CPNE1-218ENST00000439806 SWAP70Q9UH65 585 aa11.82□□□□□ -0.52
CPNE1-218ENST00000439806 CTNND2Q9UQB3 1225 aa11.82□□□□□ -0.52
CPNE1-218ENST00000439806 SMCO2A6NFE2 343 aa11.81□□□□□ -0.52
CPNE1-218ENST00000439806 hCG_1984214I3L0E3 225 aa11.81□□□□□ -0.52
CPNE1-218ENST00000439806 APBA3O96018 575 aa11.81□□□□□ -0.52
CPNE1-218ENST00000439806 HLA-DOAP06340 250 aa11.81□□□□□ -0.52
CPNE1-218ENST00000439806 ZNF18P17022 549 aa11.81□□□□□ -0.52
CPNE1-218ENST00000439806 CASP1P29466 404 aa11.81□□□□□ -0.52
CPNE1-218ENST00000439806 IL17AQ16552 155 aa11.81□□□□□ -0.52
CPNE1-218ENST00000439806 DOK7Q18PE1 504 aa11.81□□□□□ -0.52
CPNE1-218ENST00000439806 ASPRV1Q53RT3 343 aa11.81□□□□□ -0.52
CPNE1-218ENST00000439806 RRAGBQ5VZM2 374 aa11.81□□□□□ -0.52
CPNE1-218ENST00000439806 PDXDC2PQ6P474 469 aa11.81□□□□□ -0.52
CPNE1-218ENST00000439806 USP17L2Q6R6M4 530 aa11.81□□□□□ -0.52
CPNE1-218ENST00000439806 PROM2Q8N271 834 aa11.81□□□□□ -0.52
CPNE1-218ENST00000439806 ZNF713Q8N859 430 aaPredicted RBP11.81□□□□□ -0.52
CPNE1-218ENST00000439806 C4orf32Q8N8J7 132 aa11.81□□□□□ -0.52
CPNE1-218ENST00000439806 STAMQ92783 540 aa11.81□□□□□ -0.52
CPNE1-218ENST00000439806 MASTLQ96GX5 879 aa11.81□□□□□ -0.52
CPNE1-218ENST00000439806 ZMYND12Q9H0C1 365 aa11.81□□□□□ -0.52
CPNE1-218ENST00000439806 BLZF1Q9H2G9 400 aa11.81□□□□□ -0.52
CPNE1-218ENST00000439806 VAT1LQ9HCJ6 419 aa11.81□□□□□ -0.52
CPNE1-218ENST00000439806 GREB1LQ9C091 1923 aaPredicted RBP11.81□□□□□ -0.52
CPNE1-218ENST00000439806 MYO3BQ8WXR4 1341 aa11.81□□□□□ -0.52
CPNE1-218ENST00000439806 C10orf71Q711Q0 1435 aa11.8□□□□□ -0.52
CPNE1-218ENST00000439806 PLSCR1O15162 318 aa11.8□□□□□ -0.52
CPNE1-218ENST00000439806 OR52Z1P0C646 297 aa11.8□□□□□ -0.52
CPNE1-218ENST00000439806 AKR1B1P15121 316 aa11.8□□□□□ -0.52
CPNE1-218ENST00000439806 PRPHP41219 470 aa11.8□□□□□ -0.52
CPNE1-218ENST00000439806 SCNN1DP51172 638 aa11.8□□□□□ -0.52
CPNE1-218ENST00000439806 STX17P56962 302 aa11.8□□□□□ -0.52
CPNE1-218ENST00000439806 CUL4BQ13620 913 aa11.8□□□□□ -0.52
CPNE1-218ENST00000439806 FILIP1LQ4L180 1135 aa11.8□□□□□ -0.52
CPNE1-218ENST00000439806 NYAP1Q6ZVC0 841 aa11.8□□□□□ -0.52
CPNE1-218ENST00000439806 RASGRP2Q7LDG7 609 aa11.8□□□□□ -0.52
CPNE1-218ENST00000439806 CERS5Q8N5B7 392 aa11.8□□□□□ -0.52
CPNE1-218ENST00000439806 UBE2Q2Q8WVN8 375 aa11.8□□□□□ -0.52
CPNE1-218ENST00000439806 ZNF622Q969S3 477 aaKnown RBP eCLIP11.8□□□□□ -0.522e-6■■■□□ 15.2
CPNE1-218ENST00000439806 TEKT1Q969V4 418 aa11.8□□□□□ -0.52
CPNE1-218ENST00000439806 AKT1S1Q96B36 256 aa11.8□□□□□ -0.52
CPNE1-218ENST00000439806 PIGSQ96S52 555 aa11.8□□□□□ -0.52
CPNE1-218ENST00000439806 CPVLQ9H3G5 476 aa11.8□□□□□ -0.52
CPNE1-218ENST00000439806 SAMSN1Q9NSI8 373 aaKnown RBP11.8□□□□□ -0.52
CPNE1-218ENST00000439806 FRMPD2Q68DX3 1309 aaPredicted RBP11.8□□□□□ -0.52
CPNE1-218ENST00000439806 ESYT2A0FGR8 921 aa11.79□□□□□ -0.52
CPNE1-218ENST00000439806 USP17L5A8MUK1 530 aa11.79□□□□□ -0.52
CPNE1-218ENST00000439806 PPP1R3GB7ZBB8 358 aa11.79□□□□□ -0.52
CPNE1-218ENST00000439806 TUBB4AP04350 444 aa11.79□□□□□ -0.52
CPNE1-218ENST00000439806 RPN1P04843 607 aaKnown RBP11.79□□□□□ -0.52
CPNE1-218ENST00000439806 MMP10P09238 476 aa11.79□□□□□ -0.52
CPNE1-218ENST00000439806 CD44P16070 742 aaKnown RBP11.79□□□□□ -0.52
CPNE1-218ENST00000439806 UBA7P41226 1012 aa11.79□□□□□ -0.52
CPNE1-218ENST00000439806 NOVP48745 357 aa11.79□□□□□ -0.52
CPNE1-218ENST00000439806 GABPAQ06546 454 aa11.79□□□□□ -0.52
CPNE1-218ENST00000439806 KARSQ15046 597 aaKnown RBP11.79□□□□□ -0.52
CPNE1-218ENST00000439806 PPP4R3BQ5MIZ7 849 aa11.79□□□□□ -0.52
CPNE1-218ENST00000439806 ZNF658Q5TYW1 1059 aaPredicted RBP11.79□□□□□ -0.52
CPNE1-218ENST00000439806 E4F1Q66K89 784 aaPredicted RBP11.79□□□□□ -0.52
CPNE1-218ENST00000439806 HHIPL2Q6UWX4 724 aa11.79□□□□□ -0.52
CPNE1-218ENST00000439806 NEK8Q86SG6 692 aa11.79□□□□□ -0.52
CPNE1-218ENST00000439806 FCHSD1Q86WN1 690 aa11.79□□□□□ -0.52
CPNE1-218ENST00000439806 LRRC47Q8N1G4 583 aaKnown RBP11.79□□□□□ -0.52
CPNE1-218ENST00000439806 ANKRD20A12PQ8NF67 263 aa11.79□□□□□ -0.52
CPNE1-218ENST00000439806 KIF18AQ8NI77 898 aa11.79□□□□□ -0.52
CPNE1-218ENST00000439806 CCDC47Q96A33 483 aaKnown RBP11.79□□□□□ -0.52
CPNE1-218ENST00000439806 PPP1R13BQ96KQ4 1090 aa11.79□□□□□ -0.52
CPNE1-218ENST00000439806 CTAGE1Q96RT6 745 aa11.79□□□□□ -0.52
CPNE1-218ENST00000439806 CCSER1Q9C0I3 900 aa11.79□□□□□ -0.52
CPNE1-218ENST00000439806 UBA5Q9GZZ9 404 aa11.79□□□□□ -0.52
CPNE1-218ENST00000439806 PDCL3Q9H2J4 239 aa11.79□□□□□ -0.52
CPNE1-218ENST00000439806 TMEM60Q9H2L4 133 aa11.79□□□□□ -0.52
CPNE1-218ENST00000439806 DISC1Q9NRI5 854 aa11.79□□□□□ -0.52
CPNE1-218ENST00000439806 INTS13Q9NVM9 706 aa11.79□□□□□ -0.52
CPNE1-218ENST00000439806 MTMR4Q9NYA4 1195 aa11.79□□□□□ -0.52
CPNE1-218ENST00000439806 ARFGEF1Q9Y6D6 1849 aa11.79□□□□□ -0.52
CPNE1-218ENST00000439806 TNS1Q9HBL0 1735 aaKnown RBP11.78□□□□□ -0.52
CPNE1-218ENST00000439806 RGPD3A6NKT7 1758 aaPredicted RBP11.78□□□□□ -0.52
CPNE1-218ENST00000439806 RGPD4Q7Z3J3 1758 aa11.78□□□□□ -0.52
CPNE1-218ENST00000439806 IGKV6D-41A0A0C4DH26 115 aa11.78□□□□□ -0.52
CPNE1-218ENST00000439806 A0A1B0GTH6 734 aa11.78□□□□□ -0.52
CPNE1-218ENST00000439806 MPHOSPH10O00566 681 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms