RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 PRDM5Q9NQX1 630 aaPredicted RBP21.68■■□□□ 1.06
GTF3A-204ENST00000438571 GNAT2P19087 354 aa21.67■■□□□ 1.06
GTF3A-204ENST00000438571 ZMYM1Q5SVZ6 1142 aa21.67■■□□□ 1.06
GTF3A-204ENST00000438571 GPR153Q6NV75 609 aa21.67■■□□□ 1.06
GTF3A-204ENST00000438571 ZNF444Q8N0Y2 327 aaPredicted RBP21.67■■□□□ 1.06
GTF3A-204ENST00000438571 KIFC2Q96AC6 838 aa21.67■■□□□ 1.06
GTF3A-204ENST00000438571 CHMP4CQ96CF2 233 aa21.67■■□□□ 1.06
GTF3A-204ENST00000438571 RAVER2Q9HCJ3 691 aaKnown RBP21.67■■□□□ 1.06
GTF3A-204ENST00000438571 XPNPEP3Q9NQH7 507 aa21.67■■□□□ 1.06
GTF3A-204ENST00000438571 PDLIM7Q9NR12 457 aa21.67■■□□□ 1.06
GTF3A-204ENST00000438571 MTMR4Q9NYA4 1195 aa21.67■■□□□ 1.06
GTF3A-204ENST00000438571 DIS3Q9Y2L1 958 aaKnown RBP21.67■■□□□ 1.06
GTF3A-204ENST00000438571 RASGRP2Q7LDG7 609 aa21.66■■□□□ 1.06
GTF3A-204ENST00000438571 FGD4Q96M96 766 aa21.66■■□□□ 1.06
GTF3A-204ENST00000438571 LBHD1Q9BQE6 289 aaPredicted RBP21.66■■□□□ 1.06
GTF3A-204ENST00000438571 MTMR10Q9NXD2 777 aa21.66■■□□□ 1.06
GTF3A-204ENST00000438571 TACC3Q9Y6A5 838 aa21.66■■□□□ 1.06
GTF3A-204ENST00000438571 RARBP10826 455 aa21.65■■□□□ 1.06
GTF3A-204ENST00000438571 COPB2P35606 906 aa21.65■■□□□ 1.06
GTF3A-204ENST00000438571 IRX5P78411 483 aaPredicted RBP21.65■■□□□ 1.06
GTF3A-204ENST00000438571 PRPF38AQ8NAV1 312 aaKnown RBP21.65■■□□□ 1.06
GTF3A-204ENST00000438571 MKL1Q969V6 931 aa21.65■■□□□ 1.06
GTF3A-204ENST00000438571 INCENPQ9NQS7 918 aa21.65■■□□□ 1.06
GTF3A-204ENST00000438571 PHF24Q9UPV7 400 aa21.65■■□□□ 1.06
GTF3A-204ENST00000438571 DNAJC25-GNG10A0A024R161 153 aa21.64■■□□□ 1.05
GTF3A-204ENST00000438571 TRIM43BA6NCK2 446 aa21.64■■□□□ 1.05
GTF3A-204ENST00000438571 ERC2O15083 957 aa21.64■■□□□ 1.05
GTF3A-204ENST00000438571 ADAMTS4O75173 837 aa21.64■■□□□ 1.05
GTF3A-204ENST00000438571 SNAI1O95863 264 aaPredicted RBP21.64■■□□□ 1.05
GTF3A-204ENST00000438571 MX1P20591 662 aa21.64■■□□□ 1.05
GTF3A-204ENST00000438571 RRP1P56182 461 aaKnown RBP21.64■■□□□ 1.05
GTF3A-204ENST00000438571 PPARAQ07869 468 aa21.64■■□□□ 1.05
GTF3A-204ENST00000438571 C9orf50Q5SZB4 431 aa21.64■■□□□ 1.05
GTF3A-204ENST00000438571 PIAS4Q8N2W9 510 aaPredicted RBP21.64■■□□□ 1.05
GTF3A-204ENST00000438571 NEDD1Q8NHV4 660 aa21.64■■□□□ 1.05
GTF3A-204ENST00000438571 TRIM43Q96BQ3 446 aaPredicted RBP21.64■■□□□ 1.05
GTF3A-204ENST00000438571 NAPBQ9H115 298 aa21.64■■□□□ 1.05
GTF3A-204ENST00000438571 SLC38A10Q9HBR0 1119 aa21.64■■□□□ 1.05
GTF3A-204ENST00000438571 PRKAG2Q9UGJ0 569 aa21.64■■□□□ 1.05
GTF3A-204ENST00000438571 NRBP1Q9UHY1 535 aa21.64■■□□□ 1.05
GTF3A-204ENST00000438571 SYNRGQ9UMZ2 1314 aa21.63■■□□□ 1.05
GTF3A-204ENST00000438571 ADCY6O43306 1168 aa21.63■■□□□ 1.05
GTF3A-204ENST00000438571 TTLL1O95922 423 aa21.63■■□□□ 1.05
GTF3A-204ENST00000438571 AKR1A1P14550 325 aa21.63■■□□□ 1.05
GTF3A-204ENST00000438571 ITGB8P26012 769 aa21.63■■□□□ 1.05
GTF3A-204ENST00000438571 SLFN13Q68D06 897 aa21.63■■□□□ 1.05
GTF3A-204ENST00000438571 SLC17A8Q8NDX2 589 aa21.63■■□□□ 1.05
GTF3A-204ENST00000438571 BADQ92934 168 aa21.63■■□□□ 1.05
GTF3A-204ENST00000438571 CRBNQ96SW2 442 aa21.63■■□□□ 1.05
GTF3A-204ENST00000438571 LAMA4Q16363 1823 aa21.63■■□□□ 1.05
GTF3A-204ENST00000438571 A0A1W2PQ45 241 aaPredicted RBP21.62■■□□□ 1.05
GTF3A-204ENST00000438571 A0A1W2PQY0 241 aa21.62■■□□□ 1.05
GTF3A-204ENST00000438571 MYADML2A6NDP7 307 aa21.62■■□□□ 1.05
GTF3A-204ENST00000438571 ATP2A1O14983 1001 aa21.62■■□□□ 1.05
GTF3A-204ENST00000438571 TSPY3P0CV98 308 aa21.62■■□□□ 1.05
GTF3A-204ENST00000438571 TSPY8P0CW00 308 aa21.62■■□□□ 1.05
GTF3A-204ENST00000438571 TFAP4Q01664 338 aa21.62■■□□□ 1.05
GTF3A-204ENST00000438571 TLE2Q04725 743 aa21.62■■□□□ 1.05
GTF3A-204ENST00000438571 CTDSPL2Q05D32 466 aa21.62■■□□□ 1.05
GTF3A-204ENST00000438571 SHHQ15465 462 aa21.62■■□□□ 1.05
GTF3A-204ENST00000438571 VPS53Q5VIR6 699 aa21.62■■□□□ 1.05
GTF3A-204ENST00000438571 GMCL1P1Q8NEA9 526 aa21.62■■□□□ 1.05
GTF3A-204ENST00000438571 DDX11Q96FC9 970 aa21.62■■□□□ 1.05
GTF3A-204ENST00000438571 ZHX1Q9UKY1 873 aaPredicted RBP21.62■■□□□ 1.05
GTF3A-204ENST00000438571 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.62■■□□□ 1.05
GTF3A-204ENST00000438571 GBF1Q92538 1859 aa21.61■■□□□ 1.05
GTF3A-204ENST00000438571 ZBED4O75132 1171 aa21.61■■□□□ 1.05
GTF3A-204ENST00000438571 C1orf53Q5VUE5 145 aa21.61■■□□□ 1.05
GTF3A-204ENST00000438571 FAM161BQ96MY7 647 aa21.61■■□□□ 1.05
GTF3A-204ENST00000438571 NACAP1Q9BZK3 213 aa21.61■■□□□ 1.05
GTF3A-204ENST00000438571 HOMER2Q9NSB8 354 aa21.61■■□□□ 1.05
GTF3A-204ENST00000438571 FEM1BQ9UK73 627 aa21.61■■□□□ 1.05
GTF3A-204ENST00000438571 CNPY2Q9Y2B0 182 aa21.61■■□□□ 1.05
GTF3A-204ENST00000438571 CDH23Q9H251 3354 aa21.61■■□□□ 1.05
GTF3A-204ENST00000438571 SYNGAP1Q96PV0 1343 aa21.6■■□□□ 1.05
GTF3A-204ENST00000438571 NMT2O60551 498 aa21.6■■□□□ 1.05
GTF3A-204ENST00000438571 BMP3P12645 472 aa21.6■■□□□ 1.05
GTF3A-204ENST00000438571 PDE4BQ07343 736 aa21.6■■□□□ 1.05
GTF3A-204ENST00000438571 LRRFIP1Q32MZ4 808 aaKnown RBP21.6■■□□□ 1.05
GTF3A-204ENST00000438571 MAMDC4Q6UXC1 1216 aa21.6■■□□□ 1.05
GTF3A-204ENST00000438571 RNF180Q86T96 592 aa21.6■■□□□ 1.05
GTF3A-204ENST00000438571 ZNF287Q9HBT7 754 aa21.6■■□□□ 1.05
GTF3A-204ENST00000438571 ISY1Q9ULR0 285 aaKnown RBP21.6■■□□□ 1.05
GTF3A-204ENST00000438571 ZNF536O15090 1300 aa21.59■■□□□ 1.05
GTF3A-204ENST00000438571 MYH6P13533 1939 aa21.59■■□□□ 1.05
GTF3A-204ENST00000438571 TMEM232C9JQI7 657 aa21.59■■□□□ 1.05
GTF3A-204ENST00000438571 POTEB2H3BUK9 544 aa21.59■■□□□ 1.05
GTF3A-204ENST00000438571 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.59■■□□□ 1.05
GTF3A-204ENST00000438571 GUCD1Q96NT3 240 aa21.59■■□□□ 1.05
GTF3A-204ENST00000438571 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.59■■□□□ 1.05
GTF3A-204ENST00000438571 STXBP5LQ9Y2K9 1186 aa21.59■■□□□ 1.05
GTF3A-204ENST00000438571 CTDP1Q9Y5B0 961 aaPredicted RBP21.59■■□□□ 1.05
GTF3A-204ENST00000438571 DDX49Q9Y6V7 483 aaKnown RBP21.59■■□□□ 1.05
GTF3A-204ENST00000438571 EYSQ5T1H1 3165 aa21.59■■□□□ 1.05
GTF3A-204ENST00000438571 PQBP1O60828 265 aaKnown RBP21.58■■□□□ 1.05
GTF3A-204ENST00000438571 SNAP25P60880 206 aa21.58■■□□□ 1.05
GTF3A-204ENST00000438571 CNTN2Q02246 1040 aa21.58■■□□□ 1.05
GTF3A-204ENST00000438571 ANKRD45Q5TZF3 282 aa21.58■■□□□ 1.05
GTF3A-204ENST00000438571 ANKRD35Q8N283 1001 aa21.58■■□□□ 1.05
GTF3A-204ENST00000438571 MSL3Q8N5Y2 521 aaKnown RBP21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms