RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 MRPS23Q9Y3D9 190 aaKnown RBP8.08□□□□□ -1.12
SPEN-202ENST00000438066 INSRP06213 1382 aa8.07□□□□□ -1.12
SPEN-202ENST00000438066 A0A1W2PQU0 124 aa8.07□□□□□ -1.12
SPEN-202ENST00000438066 LINC01387J3KSC0 135 aa8.07□□□□□ -1.12
SPEN-202ENST00000438066 CTSBP07858 339 aa8.07□□□□□ -1.12
SPEN-202ENST00000438066 ARAFP10398 606 aa8.07□□□□□ -1.12
SPEN-202ENST00000438066 ARL4DP49703 201 aa8.07□□□□□ -1.12
SPEN-202ENST00000438066 CNGB1Q14028 1251 aaPredicted RBP8.07□□□□□ -1.12
SPEN-202ENST00000438066 CNNM4Q6P4Q7 775 aa8.07□□□□□ -1.12
SPEN-202ENST00000438066 WDR75Q8IWA0 830 aaKnown RBP8.07□□□□□ -1.12
SPEN-202ENST00000438066 TARS2Q9BW92 718 aaKnown RBP8.07□□□□□ -1.12
SPEN-202ENST00000438066 GSG1L2A8MUP6 293 aa8.06□□□□□ -1.12
SPEN-202ENST00000438066 ALG1L2C9J202 215 aa8.06□□□□□ -1.12
SPEN-202ENST00000438066 PLD2O14939 933 aa8.06□□□□□ -1.12
SPEN-202ENST00000438066 ST8SIA5O15466 376 aa8.06□□□□□ -1.12
SPEN-202ENST00000438066 ALDH1L1O75891 902 aa8.06□□□□□ -1.12
SPEN-202ENST00000438066 RGS9O75916 674 aaPredicted RBP8.06□□□□□ -1.12
SPEN-202ENST00000438066 CRIPAKQ8N1N5 446 aa8.06□□□□□ -1.12
SPEN-202ENST00000438066 ATL2Q8NHH9 583 aa8.06□□□□□ -1.12
SPEN-202ENST00000438066 ACSF2Q96CM8 615 aaPredicted RBP8.06□□□□□ -1.12
SPEN-202ENST00000438066 IPO9Q96P70 1041 aaKnown RBP8.06□□□□□ -1.12
SPEN-202ENST00000438066 RUSC1Q9BVN2 902 aa8.06□□□□□ -1.12
SPEN-202ENST00000438066 KNSTRNQ9Y448 316 aa8.06□□□□□ -1.12
SPEN-202ENST00000438066 CPS1P31327 1500 aa8.06□□□□□ -1.12
SPEN-202ENST00000438066 TP53P04637 393 aaPredicted RBP8.06□□□□□ -1.12
SPEN-202ENST00000438066 ETF1P62495 437 aaKnown RBP8.06□□□□□ -1.12
SPEN-202ENST00000438066 PIP4K2BP78356 416 aa8.06□□□□□ -1.12
SPEN-202ENST00000438066 AKAP4Q5JQC9 854 aa8.06□□□□□ -1.12
SPEN-202ENST00000438066 CC2D1BQ5T0F9 858 aaKnown RBP8.06□□□□□ -1.12
SPEN-202ENST00000438066 TDRD10Q5VZ19 366 aaKnown RBP8.06□□□□□ -1.12
SPEN-202ENST00000438066 EXOC8Q8IYI6 725 aa8.06□□□□□ -1.12
SPEN-202ENST00000438066 PPP1R14AQ96A00 147 aa8.06□□□□□ -1.12
SPEN-202ENST00000438066 DACH1Q9UI36 760 aa8.06□□□□□ -1.12
SPEN-202ENST00000438066 TACC3Q9Y6A5 838 aa8.06□□□□□ -1.12
SPEN-202ENST00000438066 BLMP54132 1417 aaPredicted RBP8.05□□□□□ -1.12
SPEN-202ENST00000438066 TRBV23-1A0A0A0MS06 115 aa8.05□□□□□ -1.12
SPEN-202ENST00000438066 PRC1O43663 620 aa8.05□□□□□ -1.12
SPEN-202ENST00000438066 DGAT1O75907 488 aa8.05□□□□□ -1.12
SPEN-202ENST00000438066 ADH6P28332 368 aa8.05□□□□□ -1.12
SPEN-202ENST00000438066 FNDC3BQ53EP0 1204 aaKnown RBP8.05□□□□□ -1.12
SPEN-202ENST00000438066 GORABQ5T7V8 394 aa8.05□□□□□ -1.12
SPEN-202ENST00000438066 FAM117BQ6P1L5 589 aa8.05□□□□□ -1.12
SPEN-202ENST00000438066 LRRTM3Q86VH5 581 aa8.05□□□□□ -1.12
SPEN-202ENST00000438066 PHACTR4Q8IZ21 702 aa8.05□□□□□ -1.12
SPEN-202ENST00000438066 FAM13CQ8NE31 585 aa8.05□□□□□ -1.12
SPEN-202ENST00000438066 CARD10Q9BWT7 1032 aa8.05□□□□□ -1.12
SPEN-202ENST00000438066 LRP2BPQ9P2M1 347 aa8.05□□□□□ -1.12
SPEN-202ENST00000438066 MAGEC2Q9UBF1 373 aaPredicted RBP8.05□□□□□ -1.12
SPEN-202ENST00000438066 MAPRE3Q9UPY8 281 aa8.05□□□□□ -1.12
SPEN-202ENST00000438066 TECPR2O15040 1411 aa8.05□□□□□ -1.12
SPEN-202ENST00000438066 ANKRD26Q9UPS8 1709 aa8.05□□□□□ -1.12
SPEN-202ENST00000438066 TMEM2Q9UHN6 1383 aa8.05□□□□□ -1.12
SPEN-202ENST00000438066 SLIT1O75093 1534 aa8.05□□□□□ -1.12
SPEN-202ENST00000438066 EVC2Q86UK5 1308 aa8.04□□□□□ -1.12
SPEN-202ENST00000438066 TRAV20A0A0B4J274 112 aa8.04□□□□□ -1.12
SPEN-202ENST00000438066 ADARB2-AS1A8MUL3 147 aa8.04□□□□□ -1.12
SPEN-202ENST00000438066 SDSP20132 328 aa8.04□□□□□ -1.12
SPEN-202ENST00000438066 PMLP29590 882 aa8.04□□□□□ -1.12
SPEN-202ENST00000438066 GUCY2FP51841 1108 aa8.04□□□□□ -1.12
SPEN-202ENST00000438066 TTF1Q15361 905 aaPredicted RBP8.04□□□□□ -1.12
SPEN-202ENST00000438066 WWC2Q6AWC2 1192 aa8.04□□□□□ -1.12
SPEN-202ENST00000438066 VWA5B2Q8N398 1253 aa8.04□□□□□ -1.12
SPEN-202ENST00000438066 AFAP1L2Q8N4X5 818 aa8.04□□□□□ -1.12
SPEN-202ENST00000438066 SLC6A18Q96N87 628 aa8.04□□□□□ -1.12
SPEN-202ENST00000438066 LGR4Q9BXB1 951 aa8.04□□□□□ -1.12
SPEN-202ENST00000438066 AVENQ9NQS1 362 aaPredicted RBP8.04□□□□□ -1.12
SPEN-202ENST00000438066 ADAM30Q9UKF2 790 aa8.04□□□□□ -1.12
SPEN-202ENST00000438066 NINLQ9Y2I6 1382 aa8.04□□□□□ -1.12
SPEN-202ENST00000438066 ARHGAP23Q9P227 1491 aa8.04□□□□□ -1.12
SPEN-202ENST00000438066 NSD3Q9BZ95 1437 aa8.04□□□□□ -1.12
SPEN-202ENST00000438066 EPHX1P07099 455 aa8.03□□□□□ -1.12
SPEN-202ENST00000438066 PPP2R2AP63151 447 aa8.03□□□□□ -1.12
SPEN-202ENST00000438066 HSP90AA2PQ14568 343 aaPredicted RBP8.03□□□□□ -1.12
SPEN-202ENST00000438066 BBS9Q3SYG4 887 aa8.03□□□□□ -1.12
SPEN-202ENST00000438066 STRA8Q7Z7C7 330 aa8.03□□□□□ -1.12
SPEN-202ENST00000438066 PPFIBP1Q86W92 1011 aa8.03□□□□□ -1.12
SPEN-202ENST00000438066 FCHSD1Q86WN1 690 aa8.03□□□□□ -1.12
SPEN-202ENST00000438066 CCAR1Q8IX12 1150 aaKnown RBP8.03□□□□□ -1.12
SPEN-202ENST00000438066 TMEM192Q8IY95 271 aa8.03□□□□□ -1.12
SPEN-202ENST00000438066 CACTIN-AS1Q8N1I8 211 aa8.03□□□□□ -1.12
SPEN-202ENST00000438066 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.03□□□□□ -1.12
SPEN-202ENST00000438066 TTC9Q92623 222 aa8.03□□□□□ -1.12
SPEN-202ENST00000438066 C8orf48Q96LL4 319 aa8.03□□□□□ -1.12
SPEN-202ENST00000438066 USP26Q9BXU7 913 aa8.03□□□□□ -1.12
SPEN-202ENST00000438066 ANKRD36BQ8N2N9 1353 aa8.03□□□□□ -1.12
SPEN-202ENST00000438066 ABCC11Q96J66 1382 aa8.03□□□□□ -1.12
SPEN-202ENST00000438066 ANKRD34BA5PLL1 514 aa8.03□□□□□ -1.12
SPEN-202ENST00000438066 NEURL1BA8MQ27 555 aa8.03□□□□□ -1.12
SPEN-202ENST00000438066 FSCN2O14926 492 aa8.03□□□□□ -1.12
SPEN-202ENST00000438066 KATNA1O75449 491 aa8.03□□□□□ -1.12
SPEN-202ENST00000438066 PPP2R1AP30153 589 aa8.03□□□□□ -1.12
SPEN-202ENST00000438066 BAG6P46379 1132 aa8.03□□□□□ -1.12
SPEN-202ENST00000438066 ZC3H12AQ5D1E8 599 aaKnown RBP8.03□□□□□ -1.12
SPEN-202ENST00000438066 PPM1JQ5JR12 505 aa8.03□□□□□ -1.12
SPEN-202ENST00000438066 DHRS1Q96LJ7 313 aa8.03□□□□□ -1.12
SPEN-202ENST00000438066 AARSD1Q9BTE6 412 aaKnown RBP8.03□□□□□ -1.12
SPEN-202ENST00000438066 JPH1Q9HDC5 661 aaPredicted RBP8.03□□□□□ -1.12
SPEN-202ENST00000438066 PICK1Q9NRD5 415 aa8.03□□□□□ -1.12
SPEN-202ENST00000438066 AAASQ9NRG9 546 aa8.03□□□□□ -1.12
SPEN-202ENST00000438066 HIF3AQ9Y2N7 669 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms