RNA–Protein interactions for RNA: ENST00000431611.5

CSNK1E-208, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-208ENST00000431611 KIFC2Q96AC6 838 aa18.05■□□□□ 0.48
CSNK1E-208ENST00000431611 CEP95Q96GE4 821 aa18.05■□□□□ 0.48
CSNK1E-208ENST00000431611 NACAP1Q9BZK3 213 aa18.05■□□□□ 0.48
CSNK1E-208ENST00000431611 PDLIM7Q9NR12 457 aa18.05■□□□□ 0.48
CSNK1E-208ENST00000431611 MTMR4Q9NYA4 1195 aa18.05■□□□□ 0.48
CSNK1E-208ENST00000431611 MYH7P12883 1935 aa18.04■□□□□ 0.48
CSNK1E-208ENST00000431611 POTEB2H3BUK9 544 aa18.04■□□□□ 0.48
CSNK1E-208ENST00000431611 DLL1O00548 723 aa18.04■□□□□ 0.48
CSNK1E-208ENST00000431611 ATP2A1O14983 1001 aa18.04■□□□□ 0.48
CSNK1E-208ENST00000431611 TLE2Q04725 743 aa18.04■□□□□ 0.48
CSNK1E-208ENST00000431611 BADQ92934 168 aa18.04■□□□□ 0.48
CSNK1E-208ENST00000431611 FEM1BQ9UK73 627 aa18.04■□□□□ 0.48
CSNK1E-208ENST00000431611 SYNPO2Q9UMS6 1093 aa18.04■□□□□ 0.48
CSNK1E-208ENST00000431611 PARP14Q460N5 1801 aa18.03■□□□□ 0.48
CSNK1E-208ENST00000431611 DNAJC25-GNG10A0A024R161 153 aa18.03■□□□□ 0.48
CSNK1E-208ENST00000431611 TTLL1O95922 423 aa18.03■□□□□ 0.48
CSNK1E-208ENST00000431611 TSPY3P0CV98 308 aa18.03■□□□□ 0.48
CSNK1E-208ENST00000431611 TSPY8P0CW00 308 aa18.03■□□□□ 0.48
CSNK1E-208ENST00000431611 PDE4BQ07343 736 aa18.03■□□□□ 0.48
CSNK1E-208ENST00000431611 SHHQ15465 462 aa18.03■□□□□ 0.48
CSNK1E-208ENST00000431611 FAM109BQ6ICB4 259 aaPredicted RBP18.03■□□□□ 0.48
CSNK1E-208ENST00000431611 SH3RF1Q7Z6J0 888 aa18.03■□□□□ 0.48
CSNK1E-208ENST00000431611 LRRC47Q8N1G4 583 aaKnown RBP18.03■□□□□ 0.48
CSNK1E-208ENST00000431611 NEDD1Q8NHV4 660 aa18.03■□□□□ 0.48
CSNK1E-208ENST00000431611 PI4K2BQ8TCG2 481 aa18.03■□□□□ 0.48
CSNK1E-208ENST00000431611 SEC62Q99442 399 aaKnown RBP18.03■□□□□ 0.48
CSNK1E-208ENST00000431611 FSD1Q9BTV5 496 aa18.03■□□□□ 0.48
CSNK1E-208ENST00000431611 NAPBQ9H115 298 aa18.03■□□□□ 0.48
CSNK1E-208ENST00000431611 SLC38A10Q9HBR0 1119 aa18.03■□□□□ 0.48
CSNK1E-208ENST00000431611 RAVER2Q9HCJ3 691 aaKnown RBP18.03■□□□□ 0.48
CSNK1E-208ENST00000431611 FAM184BQ9ULE4 1060 aa18.03■□□□□ 0.48
CSNK1E-208ENST00000431611 PCDHB15Q9Y5E8 787 aa18.03■□□□□ 0.48
CSNK1E-208ENST00000431611 TACC3Q9Y6A5 838 aa18.03■□□□□ 0.48
CSNK1E-208ENST00000431611 SYNGAP1Q96PV0 1343 aa18.02■□□□□ 0.48
CSNK1E-208ENST00000431611 TRIM43BA6NCK2 446 aa18.02■□□□□ 0.48
CSNK1E-208ENST00000431611 ADAMTS4O75173 837 aa18.02■□□□□ 0.48
CSNK1E-208ENST00000431611 SNAI1O95863 264 aaPredicted RBP18.02■□□□□ 0.48
CSNK1E-208ENST00000431611 SLC3A2P08195 630 aaKnown RBP18.02■□□□□ 0.48
CSNK1E-208ENST00000431611 SLFN13Q68D06 897 aa18.02■□□□□ 0.48
CSNK1E-208ENST00000431611 MAMDC4Q6UXC1 1216 aa18.02■□□□□ 0.48
CSNK1E-208ENST00000431611 ANKRD35Q8N283 1001 aa18.02■□□□□ 0.48
CSNK1E-208ENST00000431611 GMCL1P1Q8NEA9 526 aa18.02■□□□□ 0.48
CSNK1E-208ENST00000431611 OTUD7AQ8TE49 926 aaPredicted RBP18.02■□□□□ 0.48
CSNK1E-208ENST00000431611 TRIM43Q96BQ3 446 aaPredicted RBP18.02■□□□□ 0.48
CSNK1E-208ENST00000431611 LENG1Q96BZ8 264 aaPredicted RBP18.02■□□□□ 0.48
CSNK1E-208ENST00000431611 GREB1LQ9C091 1923 aaPredicted RBP18.02■□□□□ 0.47
CSNK1E-208ENST00000431611 A0A1W2PQ45 241 aaPredicted RBP18.01■□□□□ 0.47
CSNK1E-208ENST00000431611 A0A1W2PQY0 241 aa18.01■□□□□ 0.47
CSNK1E-208ENST00000431611 BMP3P12645 472 aa18.01■□□□□ 0.47
CSNK1E-208ENST00000431611 TFAP4Q01664 338 aa18.01■□□□□ 0.47
CSNK1E-208ENST00000431611 ZMYM1Q5SVZ6 1142 aa18.01■□□□□ 0.47
CSNK1E-208ENST00000431611 C9orf50Q5SZB4 431 aa18.01■□□□□ 0.47
CSNK1E-208ENST00000431611 ZNF467Q7Z7K2 595 aaPredicted RBP18.01■□□□□ 0.47
CSNK1E-208ENST00000431611 TSEN34Q9BSV6 310 aaKnown RBP18.01■□□□□ 0.47
CSNK1E-208ENST00000431611 FBXO40Q9UH90 709 aa18.01■□□□□ 0.47
CSNK1E-208ENST00000431611 ZHX1Q9UKY1 873 aaPredicted RBP18.01■□□□□ 0.47
CSNK1E-208ENST00000431611 COL11A1P12107 1806 aaPredicted RBP18■□□□□ 0.47
CSNK1E-208ENST00000431611 CLTBP09497 229 aa18■□□□□ 0.47
CSNK1E-208ENST00000431611 ACLYP53396 1101 aa18■□□□□ 0.47
CSNK1E-208ENST00000431611 OAZ1P54368 228 aa18■□□□□ 0.47
CSNK1E-208ENST00000431611 PPARAQ07869 468 aa18■□□□□ 0.47
CSNK1E-208ENST00000431611 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18■□□□□ 0.47
CSNK1E-208ENST00000431611 CHST13Q8NET6 341 aa18■□□□□ 0.47
CSNK1E-208ENST00000431611 FAM161BQ96MY7 647 aa18■□□□□ 0.47
CSNK1E-208ENST00000431611 ISY1Q9ULR0 285 aaKnown RBP18■□□□□ 0.47
CSNK1E-208ENST00000431611 PLIN4Q96Q06 1357 aa18■□□□□ 0.47
CSNK1E-208ENST00000431611 SYNRGQ9UMZ2 1314 aa17.99■□□□□ 0.47
CSNK1E-208ENST00000431611 DNAH12Q6ZR08 3092 aa17.99■□□□□ 0.47
CSNK1E-208ENST00000431611 PQBP1O60828 265 aaKnown RBP17.99■□□□□ 0.47
CSNK1E-208ENST00000431611 FDX1P10109 184 aa17.99■□□□□ 0.47
CSNK1E-208ENST00000431611 MX1P20591 662 aa17.99■□□□□ 0.47
CSNK1E-208ENST00000431611 ACVR2BQ13705 512 aa17.99■□□□□ 0.47
CSNK1E-208ENST00000431611 ZNF697Q5TEC3 545 aa17.99■□□□□ 0.47
CSNK1E-208ENST00000431611 KLHDC9Q8NEP7 349 aa17.99■□□□□ 0.47
CSNK1E-208ENST00000431611 NUP133Q8WUM0 1156 aa17.99■□□□□ 0.47
CSNK1E-208ENST00000431611 GUCD1Q96NT3 240 aa17.99■□□□□ 0.47
CSNK1E-208ENST00000431611 STARD7Q9NQZ5 370 aa17.99■□□□□ 0.47
CSNK1E-208ENST00000431611 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.99■□□□□ 0.47
CSNK1E-208ENST00000431611 COL6A3P12111 3177 aa17.98■□□□□ 0.47
CSNK1E-208ENST00000431611 MOXD2PA6NHM9 499 aa17.98■□□□□ 0.47
CSNK1E-208ENST00000431611 TMEM232C9JQI7 657 aa17.98■□□□□ 0.47
CSNK1E-208ENST00000431611 KIAA0355O15063 1070 aa17.98■□□□□ 0.47
CSNK1E-208ENST00000431611 DUSP11O75319 330 aaKnown RBP17.98■□□□□ 0.47
CSNK1E-208ENST00000431611 RAG1P15918 1043 aa17.98■□□□□ 0.47
CSNK1E-208ENST00000431611 ITGB8P26012 769 aa17.98■□□□□ 0.47
CSNK1E-208ENST00000431611 ABHD16BQ9H3Z7 469 aa17.98■□□□□ 0.47
CSNK1E-208ENST00000431611 TMEM39AQ9NV64 488 aa17.98■□□□□ 0.47
CSNK1E-208ENST00000431611 STAT2P52630 851 aa17.97■□□□□ 0.47
CSNK1E-208ENST00000431611 IKQ13123 557 aaPredicted RBP17.97■□□□□ 0.47
CSNK1E-208ENST00000431611 KCNA10Q16322 511 aa17.97■□□□□ 0.47
CSNK1E-208ENST00000431611 PPP4R3BQ5MIZ7 849 aa17.97■□□□□ 0.47
CSNK1E-208ENST00000431611 ANKRD33Q7Z3H0 272 aa17.97■□□□□ 0.47
CSNK1E-208ENST00000431611 FAM160B2Q86V87 743 aa17.97■□□□□ 0.47
CSNK1E-208ENST00000431611 CHURC1Q8WUH1 139 aa17.97■□□□□ 0.47
CSNK1E-208ENST00000431611 STAG1Q8WVM7 1258 aa17.97■□□□□ 0.47
CSNK1E-208ENST00000431611 GMCL1Q96IK5 515 aa17.97■□□□□ 0.47
CSNK1E-208ENST00000431611 FGD4Q96M96 766 aa17.97■□□□□ 0.47
CSNK1E-208ENST00000431611 TOX2Q96NM4 488 aa17.97■□□□□ 0.47
CSNK1E-208ENST00000431611 HOMER2Q9NSB8 354 aa17.97■□□□□ 0.47
CSNK1E-208ENST00000431611 ZBTB47Q9UFB7 747 aaPredicted RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms