RNA–Protein interactions for RNA: ENST00000430548.5

AC004540.1-202, humanhuman

TSL 4

Gene AC004540.1, Length 576 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-202ENST00000430548 MKNK2Q9HBH9 465 aa22.27■■□□□ 1.16
AC004540.1-202ENST00000430548 RAD21O60216 631 aa22.26■■□□□ 1.15
AC004540.1-202ENST00000430548 SNRNP48Q6IEG0 339 aaKnown RBP22.26■■□□□ 1.15
AC004540.1-202ENST00000430548 MAMDC4Q6UXC1 1216 aa22.26■■□□□ 1.15
AC004540.1-202ENST00000430548 RNF180Q86T96 592 aa22.26■■□□□ 1.15
AC004540.1-202ENST00000430548 MKL1Q969V6 931 aa22.26■■□□□ 1.15
AC004540.1-202ENST00000430548 FERMT2Q96AC1 680 aa22.26■■□□□ 1.15
AC004540.1-202ENST00000430548 PRDM5Q9NQX1 630 aaPredicted RBP22.26■■□□□ 1.15
AC004540.1-202ENST00000430548 EYSQ5T1H1 3165 aa22.26■■□□□ 1.15
AC004540.1-202ENST00000430548 TTC41PQ6P2S7 1318 aa22.26■■□□□ 1.15
AC004540.1-202ENST00000430548 TRIM43BA6NCK2 446 aa22.25■■□□□ 1.15
AC004540.1-202ENST00000430548 MINDY4BA8MYZ0 360 aa22.25■■□□□ 1.15
AC004540.1-202ENST00000430548 DLL1O00548 723 aa22.25■■□□□ 1.15
AC004540.1-202ENST00000430548 SH3RF1Q7Z6J0 888 aa22.25■■□□□ 1.15
AC004540.1-202ENST00000430548 PRPF38AQ8NAV1 312 aaKnown RBP22.25■■□□□ 1.15
AC004540.1-202ENST00000430548 TRIM43Q96BQ3 446 aaPredicted RBP22.25■■□□□ 1.15
AC004540.1-202ENST00000430548 CEP95Q96GE4 821 aa22.25■■□□□ 1.15
AC004540.1-202ENST00000430548 RIPK3Q9Y572 518 aa22.25■■□□□ 1.15
AC004540.1-202ENST00000430548 A0A1W2PQ45 241 aaPredicted RBP22.24■■□□□ 1.15
AC004540.1-202ENST00000430548 A0A1W2PQY0 241 aa22.24■■□□□ 1.15
AC004540.1-202ENST00000430548 PGK1P00558 417 aa22.24■■□□□ 1.15
AC004540.1-202ENST00000430548 MYCNP04198 464 aaPredicted RBP22.24■■□□□ 1.15
AC004540.1-202ENST00000430548 TDO2P48775 406 aa22.24■■□□□ 1.15
AC004540.1-202ENST00000430548 SHHQ15465 462 aa22.24■■□□□ 1.15
AC004540.1-202ENST00000430548 C9orf50Q5SZB4 431 aa22.24■■□□□ 1.15
AC004540.1-202ENST00000430548 ZNF467Q7Z7K2 595 aaPredicted RBP22.24■■□□□ 1.15
AC004540.1-202ENST00000430548 GMCL1P1Q8NEA9 526 aa22.24■■□□□ 1.15
AC004540.1-202ENST00000430548 BADQ92934 168 aa22.24■■□□□ 1.15
AC004540.1-202ENST00000430548 LENG1Q96BZ8 264 aaPredicted RBP22.24■■□□□ 1.15
AC004540.1-202ENST00000430548 SLC38A10Q9HBR0 1119 aa22.24■■□□□ 1.15
AC004540.1-202ENST00000430548 ZNF287Q9HBT7 754 aa22.24■■□□□ 1.15
AC004540.1-202ENST00000430548 MTMR4Q9NYA4 1195 aa22.24■■□□□ 1.15
AC004540.1-202ENST00000430548 CNPY2Q9Y2B0 182 aa22.24■■□□□ 1.15
AC004540.1-202ENST00000430548 SYNRGQ9UMZ2 1314 aa22.24■■□□□ 1.15
AC004540.1-202ENST00000430548 TLE2Q04725 743 aa22.23■■□□□ 1.15
AC004540.1-202ENST00000430548 STK11IPQ8N1F8 1099 aa22.23■■□□□ 1.15
AC004540.1-202ENST00000430548 PI4K2BQ8TCG2 481 aa22.23■■□□□ 1.15
AC004540.1-202ENST00000430548 FGD4Q96M96 766 aa22.23■■□□□ 1.15
AC004540.1-202ENST00000430548 TSEN34Q9BSV6 310 aaKnown RBP22.23■■□□□ 1.15
AC004540.1-202ENST00000430548 PRDM1O75626 825 aa22.22■■□□□ 1.15
AC004540.1-202ENST00000430548 SNAI1O95863 264 aaPredicted RBP22.22■■□□□ 1.15
AC004540.1-202ENST00000430548 CLTBP09497 229 aa22.22■■□□□ 1.15
AC004540.1-202ENST00000430548 OAZ1P54368 228 aa22.22■■□□□ 1.15
AC004540.1-202ENST00000430548 LRRFIP1Q32MZ4 808 aaKnown RBP22.22■■□□□ 1.15
AC004540.1-202ENST00000430548 IFNL3Q8IZI9 196 aa22.22■■□□□ 1.15
AC004540.1-202ENST00000430548 CLIP2Q9UDT6 1046 aa22.22■■□□□ 1.15
AC004540.1-202ENST00000430548 PATL2C9JE40 543 aaKnown RBP22.21■■□□□ 1.15
AC004540.1-202ENST00000430548 KIAA0355O15063 1070 aa22.21■■□□□ 1.15
AC004540.1-202ENST00000430548 TTLL1O95922 423 aa22.21■■□□□ 1.15
AC004540.1-202ENST00000430548 ITGB8P26012 769 aa22.21■■□□□ 1.15
AC004540.1-202ENST00000430548 CST5P28325 142 aaPredicted RBP22.21■■□□□ 1.15
AC004540.1-202ENST00000430548 ZNF697Q5TEC3 545 aa22.21■■□□□ 1.15
AC004540.1-202ENST00000430548 CCSAPQ6IQ19 270 aaPredicted RBP22.21■■□□□ 1.15
AC004540.1-202ENST00000430548 KLHDC9Q8NEP7 349 aa22.21■■□□□ 1.15
AC004540.1-202ENST00000430548 NEDD1Q8NHV4 660 aa22.21■■□□□ 1.15
AC004540.1-202ENST00000430548 FEM1BQ9UK73 627 aa22.21■■□□□ 1.15
AC004540.1-202ENST00000430548 TACC3Q9Y6A5 838 aa22.21■■□□□ 1.15
AC004540.1-202ENST00000430548 MOXD2PA6NHM9 499 aa22.2■■□□□ 1.14
AC004540.1-202ENST00000430548 ANKRD33Q7Z3H0 272 aa22.2■■□□□ 1.14
AC004540.1-202ENST00000430548 ZNF444Q8N0Y2 327 aaPredicted RBP22.2■■□□□ 1.14
AC004540.1-202ENST00000430548 LRRC47Q8N1G4 583 aaKnown RBP22.2■■□□□ 1.14
AC004540.1-202ENST00000430548 DDX11Q96FC9 970 aa22.2■■□□□ 1.14
AC004540.1-202ENST00000430548 FBXO40Q9UH90 709 aa22.2■■□□□ 1.14
AC004540.1-202ENST00000430548 SALL3Q9BXA9 1300 aa22.2■■□□□ 1.14
AC004540.1-202ENST00000430548 ZBED4O75132 1171 aa22.19■■□□□ 1.14
AC004540.1-202ENST00000430548 ACLYP53396 1101 aa22.19■■□□□ 1.14
AC004540.1-202ENST00000430548 SMAD3P84022 425 aaKnown RBP22.19■■□□□ 1.14
AC004540.1-202ENST00000430548 ZMYM1Q5SVZ6 1142 aa22.19■■□□□ 1.14
AC004540.1-202ENST00000430548 CPXCR1Q8N123 301 aa22.19■■□□□ 1.14
AC004540.1-202ENST00000430548 CHST13Q8NET6 341 aa22.19■■□□□ 1.14
AC004540.1-202ENST00000430548 KIFC2Q96AC6 838 aa22.19■■□□□ 1.14
AC004540.1-202ENST00000430548 TOX2Q96NM4 488 aa22.19■■□□□ 1.14
AC004540.1-202ENST00000430548 SEC62Q99442 399 aaKnown RBP22.19■■□□□ 1.14
AC004540.1-202ENST00000430548 RAVER2Q9HCJ3 691 aaKnown RBP22.19■■□□□ 1.14
AC004540.1-202ENST00000430548 FAM184BQ9ULE4 1060 aa22.19■■□□□ 1.14
AC004540.1-202ENST00000430548 ERC2O15083 957 aa22.18■■□□□ 1.14
AC004540.1-202ENST00000430548 FOXP2O15409 715 aa22.18■■□□□ 1.14
AC004540.1-202ENST00000430548 ADCY6O43306 1168 aa22.18■■□□□ 1.14
AC004540.1-202ENST00000430548 DUSP11O75319 330 aaKnown RBP22.18■■□□□ 1.14
AC004540.1-202ENST00000430548 PDE4BQ07343 736 aa22.18■■□□□ 1.14
AC004540.1-202ENST00000430548 NACAP1Q9BZK3 213 aa22.18■■□□□ 1.14
AC004540.1-202ENST00000430548 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.18■■□□□ 1.14
AC004540.1-202ENST00000430548 ZHX1Q9UKY1 873 aaPredicted RBP22.18■■□□□ 1.14
AC004540.1-202ENST00000430548 MYADML2A6NDP7 307 aa22.17■■□□□ 1.14
AC004540.1-202ENST00000430548 PQBP1O60828 265 aaKnown RBP22.17■■□□□ 1.14
AC004540.1-202ENST00000430548 APPP05067 770 aa22.17■■□□□ 1.14
AC004540.1-202ENST00000430548 FDX1P10109 184 aa22.17■■□□□ 1.14
AC004540.1-202ENST00000430548 BMP3P12645 472 aa22.17■■□□□ 1.14
AC004540.1-202ENST00000430548 PPARAQ07869 468 aa22.17■■□□□ 1.14
AC004540.1-202ENST00000430548 OTUD7AQ8TE49 926 aaPredicted RBP22.17■■□□□ 1.14
AC004540.1-202ENST00000430548 NUP133Q8WUM0 1156 aa22.17■■□□□ 1.14
AC004540.1-202ENST00000430548 GMCL1Q96IK5 515 aa22.17■■□□□ 1.14
AC004540.1-202ENST00000430548 KATNBL1Q9H079 304 aa22.17■■□□□ 1.14
AC004540.1-202ENST00000430548 UPF3AQ9H1J1 476 aaKnown RBP22.17■■□□□ 1.14
AC004540.1-202ENST00000430548 STARD7Q9NQZ5 370 aa22.17■■□□□ 1.14
AC004540.1-202ENST00000430548 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.17■■□□□ 1.14
AC004540.1-202ENST00000430548 PCDHB15Q9Y5E8 787 aa22.17■■□□□ 1.14
AC004540.1-202ENST00000430548 LAMA4Q16363 1823 aa22.16■■□□□ 1.14
AC004540.1-202ENST00000430548 TSPY3P0CV98 308 aa22.16■■□□□ 1.14
AC004540.1-202ENST00000430548 TSPY8P0CW00 308 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms