RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 ALPK3Q96L96 1907 aa5.75□□□□□ -1.49
RIF1-203ENST00000428287 ANKRD18BA2A2Z9 1011 aa5.75□□□□□ -1.49
RIF1-203ENST00000428287 PPP1R3GB7ZBB8 358 aa5.75□□□□□ -1.49
RIF1-203ENST00000428287 H7C1D1 291 aa5.75□□□□□ -1.49
RIF1-203ENST00000428287 ABLIM1O14639 778 aa5.75□□□□□ -1.49
RIF1-203ENST00000428287 DDX58O95786 925 aaKnown RBP5.75□□□□□ -1.49
RIF1-203ENST00000428287 ANTXR2P58335 489 aa5.75□□□□□ -1.49
RIF1-203ENST00000428287 OS9Q13438 667 aaPredicted RBP5.75□□□□□ -1.49
RIF1-203ENST00000428287 NCAPH2Q6IBW4 605 aa5.75□□□□□ -1.49
RIF1-203ENST00000428287 MICALCLQ6ZW33 695 aa5.75□□□□□ -1.49
RIF1-203ENST00000428287 CCDC155Q8N6L0 562 aa5.75□□□□□ -1.49
RIF1-203ENST00000428287 ZNF317Q96PQ6 595 aaPredicted RBP5.75□□□□□ -1.49
RIF1-203ENST00000428287 ERGIC2Q96RQ1 377 aa5.75□□□□□ -1.49
RIF1-203ENST00000428287 KDM4CQ9H3R0 1056 aa5.75□□□□□ -1.49
RIF1-203ENST00000428287 TMEM59LQ9UK28 342 aa5.75□□□□□ -1.49
RIF1-203ENST00000428287 FAM186AA6NE01 2351 aa5.75□□□□□ -1.49
RIF1-203ENST00000428287 CTDSPL2Q05D32 466 aa5.75□□□□□ -1.49
RIF1-203ENST00000428287 RBL2Q08999 1139 aa5.75□□□□□ -1.49
RIF1-203ENST00000428287 ALX1Q15699 326 aa5.75□□□□□ -1.49
RIF1-203ENST00000428287 CWF19L2Q2TBE0 894 aaKnown RBP5.75□□□□□ -1.49
RIF1-203ENST00000428287 INPP4AQ96PE3 977 aaPredicted RBP5.75□□□□□ -1.49
RIF1-203ENST00000428287 PJA2O43164 708 aa5.75□□□□□ -1.49
RIF1-203ENST00000428287 FBXO31Q5XUX0 539 aaPredicted RBP5.75□□□□□ -1.49
RIF1-203ENST00000428287 TSEN2Q8NCE0 465 aaKnown RBP5.75□□□□□ -1.49
RIF1-203ENST00000428287 TRIM58Q8NG06 486 aa5.75□□□□□ -1.49
RIF1-203ENST00000428287 ZFAND2BQ8WV99 257 aa5.75□□□□□ -1.49
RIF1-203ENST00000428287 DBNDD2Q9BQY9 259 aa5.75□□□□□ -1.49
RIF1-203ENST00000428287 TLR10Q9BXR5 811 aa5.75□□□□□ -1.49
RIF1-203ENST00000428287 PAPPAQ13219 1627 aa5.75□□□□□ -1.49
RIF1-203ENST00000428287 PPIP5K2O43314 1243 aa5.75□□□□□ -1.49
RIF1-203ENST00000428287 GOLGA8FQ08AF8 430 aa5.75□□□□□ -1.49
RIF1-203ENST00000428287 GOLGA8DPQ0D2H9 430 aa5.75□□□□□ -1.49
RIF1-203ENST00000428287 BIRC3Q13489 604 aa5.75□□□□□ -1.49
RIF1-203ENST00000428287 SLC5A9Q2M3M2 681 aa5.75□□□□□ -1.49
RIF1-203ENST00000428287 MMS19Q96T76 1030 aa5.75□□□□□ -1.49
RIF1-203ENST00000428287 GPHNQ9NQX3 736 aaPredicted RBP5.75□□□□□ -1.49
RIF1-203ENST00000428287 ZNF263O14978 683 aa5.75□□□□□ -1.49
RIF1-203ENST00000428287 VAV2P52735 878 aa5.75□□□□□ -1.49
RIF1-203ENST00000428287 IFFO1Q0D2I5 559 aa5.75□□□□□ -1.49
RIF1-203ENST00000428287 KRT31Q15323 416 aa5.75□□□□□ -1.49
RIF1-203ENST00000428287 SPRED3Q2MJR0 410 aa5.75□□□□□ -1.49
RIF1-203ENST00000428287 IQCEQ6IPM2 695 aa5.75□□□□□ -1.49
RIF1-203ENST00000428287 APPBP2Q92624 585 aa5.75□□□□□ -1.49
RIF1-203ENST00000428287 TMEM87BQ96K49 555 aa5.75□□□□□ -1.49
RIF1-203ENST00000428287 MYO7BQ6PIF6 2116 aa5.74□□□□□ -1.49
RIF1-203ENST00000428287 H0YGN5 161 aa5.74□□□□□ -1.49
RIF1-203ENST00000428287 IFIT3O14879 490 aaKnown RBP5.74□□□□□ -1.49
RIF1-203ENST00000428287 EEF1GP26641 437 aaKnown RBP5.74□□□□□ -1.49
RIF1-203ENST00000428287 DNM2P50570 870 aa5.74□□□□□ -1.49
RIF1-203ENST00000428287 GRIN1Q05586 938 aa5.74□□□□□ -1.49
RIF1-203ENST00000428287 KRT40Q6A162 431 aa5.74□□□□□ -1.49
RIF1-203ENST00000428287 NFS1Q9Y697 457 aa5.74□□□□□ -1.49
RIF1-203ENST00000428287 TRIM28Q13263 835 aaKnown RBP5.74□□□□□ -1.49
RIF1-203ENST00000428287 PROSER3Q2NL68 480 aa5.74□□□□□ -1.49
RIF1-203ENST00000428287 FILIP1LQ4L180 1135 aa5.74□□□□□ -1.49
RIF1-203ENST00000428287 WHAMMQ8TF30 809 aa5.74□□□□□ -1.49
RIF1-203ENST00000428287 BCL9O00512 1426 aa5.74□□□□□ -1.49
RIF1-203ENST00000428287 ABCB11O95342 1321 aa5.74□□□□□ -1.49
RIF1-203ENST00000428287 LGALS16A8MUM7 142 aa5.74□□□□□ -1.49
RIF1-203ENST00000428287 KRT83P78385 493 aa5.74□□□□□ -1.49
RIF1-203ENST00000428287 TMED8Q6PL24 325 aaPredicted RBP5.74□□□□□ -1.49
RIF1-203ENST00000428287 DDX46Q7L014 1031 aaKnown RBP5.74□□□□□ -1.49
RIF1-203ENST00000428287 OSBP2Q969R2 916 aa5.74□□□□□ -1.49
RIF1-203ENST00000428287 ITFG2Q969R8 447 aa5.74□□□□□ -1.49
RIF1-203ENST00000428287 CENPTQ96BT3 561 aa5.74□□□□□ -1.49
RIF1-203ENST00000428287 IQCDQ96DY2 449 aa5.74□□□□□ -1.49
RIF1-203ENST00000428287 EDEM3Q9BZQ6 932 aa5.74□□□□□ -1.49
RIF1-203ENST00000428287 PRPHP41219 470 aa5.74□□□□□ -1.49
RIF1-203ENST00000428287 PDCLQ13371 301 aa5.74□□□□□ -1.49
RIF1-203ENST00000428287 AMOTQ4VCS5 1084 aa5.74□□□□□ -1.49
RIF1-203ENST00000428287 HDAC7Q8WUI4 952 aa5.74□□□□□ -1.49
RIF1-203ENST00000428287 OSBPL9Q96SU4 736 aa5.74□□□□□ -1.49
RIF1-203ENST00000428287 METTL22Q9BUU2 404 aaPredicted RBP5.74□□□□□ -1.49
RIF1-203ENST00000428287 PAG1Q9NWQ8 432 aa5.74□□□□□ -1.49
RIF1-203ENST00000428287 MYO1FO00160 1098 aa5.74□□□□□ -1.49
RIF1-203ENST00000428287 CD44P16070 742 aaKnown RBP5.74□□□□□ -1.49
RIF1-203ENST00000428287 PPP2R5BQ15173 497 aa5.74□□□□□ -1.49
RIF1-203ENST00000428287 ACRBPQ8NEB7 543 aa5.74□□□□□ -1.49
RIF1-203ENST00000428287 FERMT2Q96AC1 680 aa5.74□□□□□ -1.49
RIF1-203ENST00000428287 AIFM3Q96NN9 605 aa5.74□□□□□ -1.49
RIF1-203ENST00000428287 ALG1Q9BT22 464 aa5.74□□□□□ -1.49
RIF1-203ENST00000428287 MAST2Q6P0Q8 1798 aa5.74□□□□□ -1.49
RIF1-203ENST00000428287 KIAA0754O94854 1291 aa5.74□□□□□ -1.49
RIF1-203ENST00000428287 BMP15O95972 392 aa5.74□□□□□ -1.49
RIF1-203ENST00000428287 MDH1P40925 334 aaKnown RBP5.74□□□□□ -1.49
RIF1-203ENST00000428287 LEMD3Q9Y2U8 911 aa5.74□□□□□ -1.49
RIF1-203ENST00000428287 LUC7L2Q9Y383 392 aaKnown RBP5.74□□□□□ -1.49
RIF1-203ENST00000428287 HEATR5AQ86XA9 2040 aa5.74□□□□□ -1.49
RIF1-203ENST00000428287 ANKRD36A6QL64 1941 aa5.73□□□□□ -1.49
RIF1-203ENST00000428287 TMEM2Q9UHN6 1383 aa5.73□□□□□ -1.49
RIF1-203ENST00000428287 HEATR5BQ9P2D3 2071 aa5.73□□□□□ -1.49
RIF1-203ENST00000428287 A6NHS1 94 aa5.73□□□□□ -1.49
RIF1-203ENST00000428287 FOXN1O15353 648 aa5.73□□□□□ -1.49
RIF1-203ENST00000428287 NR1D1P20393 614 aa5.73□□□□□ -1.49
RIF1-203ENST00000428287 HOXC9P31274 260 aa5.73□□□□□ -1.49
RIF1-203ENST00000428287 ASTE1Q2TB18 679 aaPredicted RBP5.73□□□□□ -1.49
RIF1-203ENST00000428287 TTMPQ5BVD1 217 aa5.73□□□□□ -1.49
RIF1-203ENST00000428287 AKAP4Q5JQC9 854 aa5.73□□□□□ -1.49
RIF1-203ENST00000428287 AEBP2Q6ZN18 517 aaPredicted RBP5.73□□□□□ -1.49
RIF1-203ENST00000428287 IP6K1Q92551 441 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms