RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 TTBK2Q6IQ55 1244 aa15.09■□□□□ 0.01
GPC1-204ENST00000426280 PAWRQ96IZ0 340 aaKnown RBP15.09■□□□□ 0.01
GPC1-204ENST00000426280 TMEM47Q9BQJ4 181 aa15.09■□□□□ 0.01
GPC1-204ENST00000426280 PPP4R2Q9NY27 417 aa15.09■□□□□ 0.01
GPC1-204ENST00000426280 TAF6LQ9Y6J9 622 aa15.09■□□□□ 0.01
GPC1-204ENST00000426280 IVNS1ABPQ9Y6Y0 642 aa15.09■□□□□ 0.01
GPC1-204ENST00000426280 ZMYM6O95789 1325 aa15.09■□□□□ 0.01
GPC1-204ENST00000426280 STRNO43815 780 aa15.08■□□□□ 0
GPC1-204ENST00000426280 FARP2O94887 1054 aaPredicted RBP15.08■□□□□ 0
GPC1-204ENST00000426280 BMP3P12645 472 aa15.08■□□□□ 0
GPC1-204ENST00000426280 ERICH6BQ5W0A0 696 aa15.08■□□□□ 0
GPC1-204ENST00000426280 DPP9Q86TI2 863 aa15.08■□□□□ 0
GPC1-204ENST00000426280 PRPF38AQ8NAV1 312 aaKnown RBP15.08■□□□□ 0
GPC1-204ENST00000426280 STAG1Q8WVM7 1258 aa15.08■□□□□ 0
GPC1-204ENST00000426280 MROH8Q9H579 483 aa15.08■□□□□ 0
GPC1-204ENST00000426280 ZNF536O15090 1300 aa15.08■□□□□ 0
GPC1-204ENST00000426280 ZNF792Q3KQV3 632 aa15.07■□□□□ 0
GPC1-204ENST00000426280 PRPF38BQ5VTL8 546 aaKnown RBP15.07■□□□□ 0
GPC1-204ENST00000426280 SNRNP48Q6IEG0 339 aaKnown RBP15.07■□□□□ 0
GPC1-204ENST00000426280 MFSD6Q6ZSS7 791 aa15.07■□□□□ 0
GPC1-204ENST00000426280 DSCC1Q9BVC3 393 aa15.07■□□□□ 0
GPC1-204ENST00000426280 SLC38A10Q9HBR0 1119 aa15.07■□□□□ 0
GPC1-204ENST00000426280 TCP11L1Q9NUJ3 509 aa15.07■□□□□ 0
GPC1-204ENST00000426280 FEM1BQ9UK73 627 aa15.07■□□□□ 0
GPC1-204ENST00000426280 OGDHLQ9ULD0 1010 aa15.07■□□□□ 0
GPC1-204ENST00000426280 B4E1Z4 1266 aa15.06■□□□□ 0
GPC1-204ENST00000426280 ZNF213O14771 459 aa15.06■□□□□ 0
GPC1-204ENST00000426280 SLC25A27O95847 323 aa15.06■□□□□ 0
GPC1-204ENST00000426280 SLC16A2P36021 539 aa15.06■□□□□ 0
GPC1-204ENST00000426280 ANO1Q5XXA6 986 aa15.06■□□□□ 0
GPC1-204ENST00000426280 GMCL1Q96IK5 515 aa15.06■□□□□ 0
GPC1-204ENST00000426280 MAML3Q96JK9 1138 aa15.06■□□□□ 0
GPC1-204ENST00000426280 AGBL1Q96MI9 1066 aa15.06■□□□□ 0
GPC1-204ENST00000426280 MMP19Q99542 508 aa15.06■□□□□ 0
GPC1-204ENST00000426280 SYNPO2Q9UMS6 1093 aa15.06■□□□□ 0
GPC1-204ENST00000426280 H0YGN5 161 aa15.05■□□□□ -0
GPC1-204ENST00000426280 HIP1O00291 1037 aa15.05■□□□□ -0
GPC1-204ENST00000426280 ATP2A1O14983 1001 aa15.05■□□□□ -0
GPC1-204ENST00000426280 ZBED4O75132 1171 aa15.05■□□□□ -0
GPC1-204ENST00000426280 KDM4AO75164 1064 aa15.05■□□□□ -0
GPC1-204ENST00000426280 FCER1AP12319 257 aa15.05■□□□□ -0
GPC1-204ENST00000426280 CYBAP13498 195 aa15.05■□□□□ -0
GPC1-204ENST00000426280 SLC1A4P43007 532 aa15.05■□□□□ -0
GPC1-204ENST00000426280 TRMT44Q8IYL2 757 aaKnown RBP15.05■□□□□ -0
GPC1-204ENST00000426280 FGD4Q96M96 766 aa15.05■□□□□ -0
GPC1-204ENST00000426280 ZSWIM5Q9P217 1185 aa15.05■□□□□ -0
GPC1-204ENST00000426280 PRR12Q9ULL5 1215 aa15.05■□□□□ -0
GPC1-204ENST00000426280 DDX49Q9Y6V7 483 aaKnown RBP15.05■□□□□ -0
GPC1-204ENST00000426280 FRMPD2Q68DX3 1309 aaPredicted RBP15.05■□□□□ -0
GPC1-204ENST00000426280 ZNFX1Q9P2E3 1918 aaKnown RBP15.04■□□□□ -0
GPC1-204ENST00000426280 ZNF236Q9UL36 1845 aa15.04■□□□□ -0
GPC1-204ENST00000426280 TOP1P11387 765 aaKnown RBP15.04■□□□□ -0
GPC1-204ENST00000426280 MFAP1P55081 439 aaKnown RBP15.04■□□□□ -0
GPC1-204ENST00000426280 COL9A3Q14050 684 aaPredicted RBP15.04■□□□□ -0
GPC1-204ENST00000426280 MFSD14CQ5VZR4 134 aa15.04■□□□□ -0
GPC1-204ENST00000426280 OLFML2BQ68BL8 750 aa15.04■□□□□ -0
GPC1-204ENST00000426280 CYB5R4Q7L1T6 521 aa15.04■□□□□ -0
GPC1-204ENST00000426280 ABRAQ8N0Z2 381 aa15.04■□□□□ -0
GPC1-204ENST00000426280 DPF3Q92784 378 aa15.04■□□□□ -0
GPC1-204ENST00000426280 TEX13BQ9BXU2 312 aa15.04■□□□□ -0
GPC1-204ENST00000426280 CPVLQ9H3G5 476 aa15.04■□□□□ -0
GPC1-204ENST00000426280 GPCPD1Q9NPB8 672 aa15.04■□□□□ -0
GPC1-204ENST00000426280 ISY1Q9ULR0 285 aaKnown RBP15.04■□□□□ -0
GPC1-204ENST00000426280 PFASO15067 1338 aa15.03■□□□□ -0
GPC1-204ENST00000426280 DNAJC25-GNG10A0A024R161 153 aa15.03■□□□□ -0
GPC1-204ENST00000426280 SGSM2O43147 1006 aa15.03■□□□□ -0
GPC1-204ENST00000426280 CNGA1P29973 690 aa15.03■□□□□ -0
GPC1-204ENST00000426280 MUM1L1Q5H9M0 696 aa15.03■□□□□ -0
GPC1-204ENST00000426280 CCDC174Q6PII3 467 aa15.03■□□□□ -0
GPC1-204ENST00000426280 PURBQ96QR8 312 aaKnown RBP15.03■□□□□ -0
GPC1-204ENST00000426280 PLA2G6O60733 806 aa15.02■□□□□ -0
GPC1-204ENST00000426280 SNAI1O95863 264 aaPredicted RBP15.02■□□□□ -0
GPC1-204ENST00000426280 CYP21A2P08686 494 aa15.02■□□□□ -0
GPC1-204ENST00000426280 GOLGA8HP0CJ92 632 aa15.02■□□□□ -0
GPC1-204ENST00000426280 PDHBP11177 359 aa15.02■□□□□ -0
GPC1-204ENST00000426280 COL6A1P12109 1028 aa15.02■□□□□ -0
GPC1-204ENST00000426280 STAT2P52630 851 aa15.02■□□□□ -0
GPC1-204ENST00000426280 KCTD2Q14681 263 aa15.02■□□□□ -0
GPC1-204ENST00000426280 CCDC96Q2M329 555 aa15.02■□□□□ -0
GPC1-204ENST00000426280 BTNL9Q6UXG8 535 aa15.02■□□□□ -0
GPC1-204ENST00000426280 STOX1Q6ZVD7 989 aa15.02■□□□□ -0
GPC1-204ENST00000426280 CHURC1Q8WUH1 139 aa15.02■□□□□ -0
GPC1-204ENST00000426280 SENP2Q9HC62 589 aa15.02■□□□□ -0
GPC1-204ENST00000426280 HOMER2Q9NSB8 354 aa15.02■□□□□ -0
GPC1-204ENST00000426280 DDX20Q9UHI6 824 aaKnown RBP15.02■□□□□ -0
GPC1-204ENST00000426280 SNHG28P0DPA3 235 aa15.01□□□□□ -0.01
GPC1-204ENST00000426280 CNTN2Q02246 1040 aa15.01□□□□□ -0.01
GPC1-204ENST00000426280 IMMTQ16891 758 aaKnown RBP15.01□□□□□ -0.01
GPC1-204ENST00000426280 FAM160B2Q86V87 743 aa15.01□□□□□ -0.01
GPC1-204ENST00000426280 DCAF4Q8WV16 495 aa15.01□□□□□ -0.01
GPC1-204ENST00000426280 ANKS1AQ92625 1134 aa15.01□□□□□ -0.01
GPC1-204ENST00000426280 ESR2Q92731 530 aa15.01□□□□□ -0.01
GPC1-204ENST00000426280 LENG1Q96BZ8 264 aaPredicted RBP15.01□□□□□ -0.01
GPC1-204ENST00000426280 TTC14Q96N46 770 aa15.01□□□□□ -0.01
GPC1-204ENST00000426280 TINF2Q9BSI4 451 aa15.01□□□□□ -0.01
GPC1-204ENST00000426280 RNF41Q9H4P4 317 aaPredicted RBP15.01□□□□□ -0.01
GPC1-204ENST00000426280 PDE4DIPQ5VU43 2346 aa15□□□□□ -0.01
GPC1-204ENST00000426280 ALPK3Q96L96 1907 aa15□□□□□ -0.01
GPC1-204ENST00000426280 ASTN1O14525 1302 aa15□□□□□ -0.01
GPC1-204ENST00000426280 SOWAHBA6NEL2 793 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms