RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 STK11IPQ8N1F8 1099 aa15.18■□□□□ 0.02
SGCE-203ENST00000425444 CCDC17Q96LX7 622 aa15.18■□□□□ 0.02
SGCE-203ENST00000425444 LRFN3Q9BTN0 628 aa15.18■□□□□ 0.02
SGCE-203ENST00000425444 NACAP1Q9BZK3 213 aa15.18■□□□□ 0.02
SGCE-203ENST00000425444 SH2D4AQ9H788 454 aa15.18■□□□□ 0.02
SGCE-203ENST00000425444 CNMDO75829 334 aa15.17■□□□□ 0.02
SGCE-203ENST00000425444 GRB14Q14449 540 aa15.17■□□□□ 0.02
SGCE-203ENST00000425444 CLEC10AQ8IUN9 316 aa15.17■□□□□ 0.02
SGCE-203ENST00000425444 SEC62Q99442 399 aaKnown RBP15.17■□□□□ 0.02
SGCE-203ENST00000425444 TSPYL2Q9H2G4 693 aaPredicted RBP15.17■□□□□ 0.02
SGCE-203ENST00000425444 RPAP3Q9H6T3 665 aaPredicted RBP15.17■□□□□ 0.02
SGCE-203ENST00000425444 MKNK2Q9HBH9 465 aa15.17■□□□□ 0.02
SGCE-203ENST00000425444 EPB41L4AQ9HCS5 686 aaPredicted RBP15.17■□□□□ 0.02
SGCE-203ENST00000425444 A0A1W2PRG0 241 aa15.16■□□□□ 0.02
SGCE-203ENST00000425444 KIAA0355O15063 1070 aa15.16■□□□□ 0.02
SGCE-203ENST00000425444 SEPT4O43236 478 aa15.16■□□□□ 0.02
SGCE-203ENST00000425444 PQBP1O60828 265 aaKnown RBP15.16■□□□□ 0.02
SGCE-203ENST00000425444 PBX2P40425 430 aa15.16■□□□□ 0.02
SGCE-203ENST00000425444 ADGRE1Q14246 886 aa15.16■□□□□ 0.02
SGCE-203ENST00000425444 LRRC41Q15345 812 aa15.16■□□□□ 0.02
SGCE-203ENST00000425444 SBK1Q52WX2 424 aa15.16■□□□□ 0.02
SGCE-203ENST00000425444 CATSPERGQ6ZRH7 1159 aa15.16■□□□□ 0.02
SGCE-203ENST00000425444 DPP9Q86TI2 863 aa15.16■□□□□ 0.02
SGCE-203ENST00000425444 SMC5Q8IY18 1101 aa15.16■□□□□ 0.02
SGCE-203ENST00000425444 EVI5LQ96CN4 794 aa15.16■□□□□ 0.02
SGCE-203ENST00000425444 TANGO6Q9C0B7 1094 aa15.16■□□□□ 0.02
SGCE-203ENST00000425444 TMEM39AQ9NV64 488 aa15.16■□□□□ 0.02
SGCE-203ENST00000425444 PLXNA1Q9UIW2 1896 aa15.16■□□□□ 0.02
SGCE-203ENST00000425444 ROBO3Q96MS0 1386 aa15.15■□□□□ 0.02
SGCE-203ENST00000425444 WDFY4Q6ZS81 3184 aa15.15■□□□□ 0.02
SGCE-203ENST00000425444 PATL2C9JE40 543 aaKnown RBP15.15■□□□□ 0.02
SGCE-203ENST00000425444 ZMYM1Q5SVZ6 1142 aa15.15■□□□□ 0.02
SGCE-203ENST00000425444 IFNL3Q8IZI9 196 aa15.15■□□□□ 0.02
SGCE-203ENST00000425444 PBX4Q9BYU1 374 aa15.15■□□□□ 0.02
SGCE-203ENST00000425444 NAPBQ9H115 298 aa15.15■□□□□ 0.02
SGCE-203ENST00000425444 EPHX3Q9H6B9 360 aa15.15■□□□□ 0.02
SGCE-203ENST00000425444 SMCHD1A6NHR9 2005 aa15.14■□□□□ 0.01
SGCE-203ENST00000425444 GRXCR1A8MXD5 290 aa15.14■□□□□ 0.01
SGCE-203ENST00000425444 TRIM6-TRIM34B2RNG4 842 aa15.14■□□□□ 0.01
SGCE-203ENST00000425444 RAD21O60216 631 aa15.14■□□□□ 0.01
SGCE-203ENST00000425444 IGHDP01880 384 aa15.14■□□□□ 0.01
SGCE-203ENST00000425444 BMP1P13497 986 aa15.14■□□□□ 0.01
SGCE-203ENST00000425444 TMEM31Q5JXX7 168 aa15.14■□□□□ 0.01
SGCE-203ENST00000425444 ALYREFQ86V81 257 aaKnown RBP15.14■□□□□ 0.01
SGCE-203ENST00000425444 CHD1LQ86WJ1 897 aa15.14■□□□□ 0.01
SGCE-203ENST00000425444 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.14■□□□□ 0.01
SGCE-203ENST00000425444 KANSL2Q9H9L4 492 aa15.14■□□□□ 0.01
SGCE-203ENST00000425444 ZNF287Q9HBT7 754 aa15.14■□□□□ 0.01
SGCE-203ENST00000425444 CXXC1Q9P0U4 656 aaPredicted RBP15.14■□□□□ 0.01
SGCE-203ENST00000425444 IGHA2P01877 340 aa15.13■□□□□ 0.01
SGCE-203ENST00000425444 SLC3A2P08195 630 aaKnown RBP15.13■□□□□ 0.01
SGCE-203ENST00000425444 EEF2P13639 858 aaKnown RBP15.13■□□□□ 0.01
SGCE-203ENST00000425444 IRX6P78412 446 aaPredicted RBP15.13■□□□□ 0.01
SGCE-203ENST00000425444 TFF2Q03403 129 aa15.13■□□□□ 0.01
SGCE-203ENST00000425444 FAM47AQ5JRC9 791 aa15.13■□□□□ 0.01
SGCE-203ENST00000425444 OLFML2BQ68BL8 750 aa15.13■□□□□ 0.01
SGCE-203ENST00000425444 SPICE1Q8N0Z3 855 aa15.13■□□□□ 0.01
SGCE-203ENST00000425444 RILPL2Q969X0 211 aa15.13■□□□□ 0.01
SGCE-203ENST00000425444 VCPKMTQ9H867 229 aa15.13■□□□□ 0.01
SGCE-203ENST00000425444 BTBD7Q9P203 1132 aa15.13■□□□□ 0.01
SGCE-203ENST00000425444 TMX2Q9Y320 296 aa15.13■□□□□ 0.01
SGCE-203ENST00000425444 SPDYE16A6NNV3 312 aaPredicted RBP15.12■□□□□ 0.01
SGCE-203ENST00000425444 PRDM1O75626 825 aa15.12■□□□□ 0.01
SGCE-203ENST00000425444 RASA1P20936 1047 aa15.12■□□□□ 0.01
SGCE-203ENST00000425444 ADORA2AP29274 412 aa15.12■□□□□ 0.01
SGCE-203ENST00000425444 NUCB1Q02818 461 aa15.12■□□□□ 0.01
SGCE-203ENST00000425444 PRAMEF19Q5SWL8 479 aa15.12■□□□□ 0.01
SGCE-203ENST00000425444 SAMD1Q6SPF0 538 aaPredicted RBP15.12■□□□□ 0.01
SGCE-203ENST00000425444 ZNF444Q8N0Y2 327 aaPredicted RBP15.12■□□□□ 0.01
SGCE-203ENST00000425444 MICALL1Q8N3F8 863 aa15.12■□□□□ 0.01
SGCE-203ENST00000425444 GOPCQ9HD26 462 aa15.12■□□□□ 0.01
SGCE-203ENST00000425444 PHF24Q9UPV7 400 aa15.12■□□□□ 0.01
SGCE-203ENST00000425444 CACNA1AO00555 2505 aa15.12■□□□□ 0.01
SGCE-203ENST00000425444 PRRC2BQ5JSZ5 2229 aaKnown RBP15.12■□□□□ 0.01
SGCE-203ENST00000425444 WDR46O15213 610 aaKnown RBP15.11■□□□□ 0.01
SGCE-203ENST00000425444 FLOT1O75955 427 aa15.11■□□□□ 0.01
SGCE-203ENST00000425444 COG2Q14746 738 aa15.11■□□□□ 0.01
SGCE-203ENST00000425444 AAK1Q2M2I8 961 aa15.11■□□□□ 0.01
SGCE-203ENST00000425444 KIAA1755Q5JYT7 1200 aa15.11■□□□□ 0.01
SGCE-203ENST00000425444 CCDC174Q6PII3 467 aa15.11■□□□□ 0.01
SGCE-203ENST00000425444 LBX2Q6XYB7 198 aa15.11■□□□□ 0.01
SGCE-203ENST00000425444 SIAH1Q8IUQ4 282 aa15.11■□□□□ 0.01
SGCE-203ENST00000425444 HOXC10Q9NYD6 342 aa15.11■□□□□ 0.01
SGCE-203ENST00000425444 MSRAQ9UJ68 235 aa15.11■□□□□ 0.01
SGCE-203ENST00000425444 DCDC2CA8MYV0 355 aa15.1■□□□□ 0.01
SGCE-203ENST00000425444 TIMP1P01033 207 aa15.1■□□□□ 0.01
SGCE-203ENST00000425444 KCNQ1P51787 676 aa15.1■□□□□ 0.01
SGCE-203ENST00000425444 PDE4BQ07343 736 aa15.1■□□□□ 0.01
SGCE-203ENST00000425444 PPARAQ07869 468 aa15.1■□□□□ 0.01
SGCE-203ENST00000425444 FAAP100Q0VG06 881 aa15.1■□□□□ 0.01
SGCE-203ENST00000425444 SKIV2LQ15477 1246 aaKnown RBP15.1■□□□□ 0.01
SGCE-203ENST00000425444 RNF180Q86T96 592 aa15.1■□□□□ 0.01
SGCE-203ENST00000425444 XPNPEP3Q9NQH7 507 aa15.1■□□□□ 0.01
SGCE-203ENST00000425444 HELLSQ9NRZ9 838 aa15.1■□□□□ 0.01
SGCE-203ENST00000425444 A0A0D9SFI3 127 aa15.09■□□□□ 0.01
SGCE-203ENST00000425444 A0A1W2PQ45 241 aaPredicted RBP15.09■□□□□ 0.01
SGCE-203ENST00000425444 A0A1W2PQY0 241 aa15.09■□□□□ 0.01
SGCE-203ENST00000425444 STRNO43815 780 aa15.09■□□□□ 0.01
SGCE-203ENST00000425444 TSPY3P0CV98 308 aa15.09■□□□□ 0.01
SGCE-203ENST00000425444 TSPY8P0CW00 308 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms