RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 MCCP23508 829 aa11.01□□□□□ -0.65
NUP50-206ENST00000422489 COPB2P35606 906 aa11.01□□□□□ -0.65
NUP50-206ENST00000422489 IRX6P78412 446 aaPredicted RBP11.01□□□□□ -0.65
NUP50-206ENST00000422489 NUCB1Q02818 461 aa11.01□□□□□ -0.65
NUP50-206ENST00000422489 PLEKHM2Q8IWE5 1019 aa11.01□□□□□ -0.65
NUP50-206ENST00000422489 REPS2Q8NFH8 660 aa11.01□□□□□ -0.65
NUP50-206ENST00000422489 MAML3Q96JK9 1138 aa11.01□□□□□ -0.65
NUP50-206ENST00000422489 TEX13BQ9BXU2 312 aa11.01□□□□□ -0.65
NUP50-206ENST00000422489 ZNF214Q9UL59 606 aaPredicted RBP11.01□□□□□ -0.65
NUP50-206ENST00000422489 NMT2O60551 498 aa11□□□□□ -0.65
NUP50-206ENST00000422489 HSPD1P10809 573 aaKnown RBP11□□□□□ -0.65
NUP50-206ENST00000422489 SLC1A4P43007 532 aa11□□□□□ -0.65
NUP50-206ENST00000422489 ATN1P54259 1190 aaPredicted RBP11□□□□□ -0.65
NUP50-206ENST00000422489 HAND2P61296 217 aa11□□□□□ -0.65
NUP50-206ENST00000422489 ALX1Q15699 326 aa11□□□□□ -0.65
NUP50-206ENST00000422489 PPP4R3BQ5MIZ7 849 aa11□□□□□ -0.65
NUP50-206ENST00000422489 GJC2Q5T442 439 aaPredicted RBP11□□□□□ -0.65
NUP50-206ENST00000422489 ANKRD35Q8N283 1001 aa11□□□□□ -0.65
NUP50-206ENST00000422489 ARRDC4Q8NCT1 418 aa11□□□□□ -0.65
NUP50-206ENST00000422489 GMCL1P1Q8NEA9 526 aa11□□□□□ -0.65
NUP50-206ENST00000422489 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11□□□□□ -0.65
NUP50-206ENST00000422489 RIPK3Q9Y572 518 aa11□□□□□ -0.65
NUP50-206ENST00000422489 TACC3Q9Y6A5 838 aa11□□□□□ -0.65
NUP50-206ENST00000422489 SEPT4O43236 478 aa10.99□□□□□ -0.65
NUP50-206ENST00000422489 COL6A1P12109 1028 aa10.99□□□□□ -0.65
NUP50-206ENST00000422489 CYBAP13498 195 aa10.99□□□□□ -0.65
NUP50-206ENST00000422489 SNAP25P60880 206 aa10.99□□□□□ -0.65
NUP50-206ENST00000422489 LRRC26Q2I0M4 334 aa10.99□□□□□ -0.65
NUP50-206ENST00000422489 ZNF792Q3KQV3 632 aa10.99□□□□□ -0.65
NUP50-206ENST00000422489 KCTD1Q719H9 257 aa10.99□□□□□ -0.65
NUP50-206ENST00000422489 ZNF589Q86UQ0 364 aaPredicted RBP10.99□□□□□ -0.65
NUP50-206ENST00000422489 CHURC1Q8WUH1 139 aa10.99□□□□□ -0.65
NUP50-206ENST00000422489 STAG1Q8WVM7 1258 aa10.99□□□□□ -0.65
NUP50-206ENST00000422489 TINF2Q9BSI4 451 aa10.99□□□□□ -0.65
NUP50-206ENST00000422489 IL17RBQ9NRM6 502 aa10.99□□□□□ -0.65
NUP50-206ENST00000422489 DIAPH3Q9NSV4 1193 aa10.99□□□□□ -0.65
NUP50-206ENST00000422489 ANAPC4Q9UJX5 808 aa10.99□□□□□ -0.65
NUP50-206ENST00000422489 PDE4DIPQ5VU43 2346 aa10.99□□□□□ -0.65
NUP50-206ENST00000422489 PFASO15067 1338 aa10.99□□□□□ -0.65
NUP50-206ENST00000422489 KBTBD13C9JR72 458 aa10.98□□□□□ -0.65
NUP50-206ENST00000422489 IGHA2P01877 340 aa10.98□□□□□ -0.65
NUP50-206ENST00000422489 TAL1P17542 331 aaPredicted RBP10.98□□□□□ -0.65
NUP50-206ENST00000422489 FXR1P51114 621 aaKnown RBP eCLIP10.98□□□□□ -0.65
NUP50-206ENST00000422489 MFAP1P55081 439 aaKnown RBP10.98□□□□□ -0.65
NUP50-206ENST00000422489 CCDC96Q2M329 555 aa10.98□□□□□ -0.65
NUP50-206ENST00000422489 RCSD1Q6JBY9 416 aa10.98□□□□□ -0.65
NUP50-206ENST00000422489 CCDC174Q6PII3 467 aa10.98□□□□□ -0.65
NUP50-206ENST00000422489 CWC27Q6UX04 472 aaKnown RBP10.98□□□□□ -0.65
NUP50-206ENST00000422489 FAM160B2Q86V87 743 aa10.98□□□□□ -0.65
NUP50-206ENST00000422489 TICAM2Q86XR7 235 aa10.98□□□□□ -0.65
NUP50-206ENST00000422489 FERMT2Q96AC1 680 aa10.98□□□□□ -0.65
NUP50-206ENST00000422489 GMCL1Q96IK5 515 aa10.98□□□□□ -0.65
NUP50-206ENST00000422489 SLC38A10Q9HBR0 1119 aa10.98□□□□□ -0.65
NUP50-206ENST00000422489 HOMER2Q9NSB8 354 aa10.98□□□□□ -0.65
NUP50-206ENST00000422489 SYNPO2Q9UMS6 1093 aa10.98□□□□□ -0.65
NUP50-206ENST00000422489 DIS3Q9Y2L1 958 aaKnown RBP10.98□□□□□ -0.65
NUP50-206ENST00000422489 CCDC171Q6TFL3 1326 aa10.98□□□□□ -0.65
NUP50-206ENST00000422489 PLXNB2O15031 1838 aa10.98□□□□□ -0.65
NUP50-206ENST00000422489 BAZ2AQ9UIF9 1905 aaKnown RBP10.97□□□□□ -0.65
NUP50-206ENST00000422489 DNM1LO00429 736 aa10.97□□□□□ -0.65
NUP50-206ENST00000422489 ZNF213O14771 459 aa10.97□□□□□ -0.65
NUP50-206ENST00000422489 ATP2A1O14983 1001 aa10.97□□□□□ -0.65
NUP50-206ENST00000422489 ORC4O43929 436 aa10.97□□□□□ -0.65
NUP50-206ENST00000422489 FDX1P10109 184 aa10.97□□□□□ -0.65
NUP50-206ENST00000422489 STAT2P52630 851 aa10.97□□□□□ -0.65
NUP50-206ENST00000422489 MFSD6Q6ZSS7 791 aa10.97□□□□□ -0.65
NUP50-206ENST00000422489 AGBL1Q96MI9 1066 aa10.97□□□□□ -0.65
NUP50-206ENST00000422489 OSBPL3Q9H4L5 887 aa10.97□□□□□ -0.65
NUP50-206ENST00000422489 XPNPEP3Q9NQH7 507 aa10.97□□□□□ -0.65
NUP50-206ENST00000422489 PCDH10Q9P2E7 1040 aa10.97□□□□□ -0.65
NUP50-206ENST00000422489 FBXO40Q9UH90 709 aa10.97□□□□□ -0.65
NUP50-206ENST00000422489 CNPY2Q9Y2B0 182 aa10.97□□□□□ -0.65
NUP50-206ENST00000422489 HIP1O00291 1037 aa10.96□□□□□ -0.65
NUP50-206ENST00000422489 RARBP10826 455 aa10.96□□□□□ -0.65
NUP50-206ENST00000422489 ALAS1P13196 640 aa10.96□□□□□ -0.65
NUP50-206ENST00000422489 ADCYAP1R1P41586 468 aa10.96□□□□□ -0.65
NUP50-206ENST00000422489 OAZ1P54368 228 aa10.96□□□□□ -0.65
NUP50-206ENST00000422489 AKNAD1Q5T1N1 836 aa10.96□□□□□ -0.65
NUP50-206ENST00000422489 TTBK2Q6IQ55 1244 aa10.96□□□□□ -0.65
NUP50-206ENST00000422489 CHST13Q8NET6 341 aa10.96□□□□□ -0.65
NUP50-206ENST00000422489 TRERF1Q96PN7 1200 aa10.96□□□□□ -0.65
NUP50-206ENST00000422489 TMEM47Q9BQJ4 181 aa10.96□□□□□ -0.65
NUP50-206ENST00000422489 GPCPD1Q9NPB8 672 aa10.96□□□□□ -0.65
NUP50-206ENST00000422489 ZHX1Q9UKY1 873 aaPredicted RBP10.96□□□□□ -0.65
NUP50-206ENST00000422489 FAM184BQ9ULE4 1060 aa10.96□□□□□ -0.65
NUP50-206ENST00000422489 PRR12Q9ULL5 1215 aa10.96□□□□□ -0.65
NUP50-206ENST00000422489 ATP11BQ9Y2G3 1177 aa10.96□□□□□ -0.65
NUP50-206ENST00000422489 PLIN4Q96Q06 1357 aa10.95□□□□□ -0.66
NUP50-206ENST00000422489 FRMPD2Q68DX3 1309 aaPredicted RBP10.95□□□□□ -0.66
NUP50-206ENST00000422489 POTEB2H3BUK9 544 aa10.95□□□□□ -0.66
NUP50-206ENST00000422489 PGK1P00558 417 aa10.95□□□□□ -0.66
NUP50-206ENST00000422489 FGRP09769 529 aa10.95□□□□□ -0.66
NUP50-206ENST00000422489 ZNF865P0CJ78 1059 aaPredicted RBP10.95□□□□□ -0.66
NUP50-206ENST00000422489 TOP1P11387 765 aaKnown RBP10.95□□□□□ -0.66
NUP50-206ENST00000422489 AKR1A1P14550 325 aa10.95□□□□□ -0.66
NUP50-206ENST00000422489 SLC16A2P36021 539 aa10.95□□□□□ -0.66
NUP50-206ENST00000422489 MAGEA10P43363 369 aaPredicted RBP10.95□□□□□ -0.66
NUP50-206ENST00000422489 MDM2Q00987 491 aaPredicted RBP10.95□□□□□ -0.66
NUP50-206ENST00000422489 LRRC41Q15345 812 aa10.95□□□□□ -0.66
NUP50-206ENST00000422489 SLC39A5Q6ZMH5 540 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms