RNA–Protein interactions for RNA: ENST00000422026.1

SSX2IP-202, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-202ENST00000422026 BACE1P56817 501 aa16.56■□□□□ 0.24
SSX2IP-202ENST00000422026 FKBP1BP68106 108 aa16.56■□□□□ 0.24
SSX2IP-202ENST00000422026 SLC35G1Q2M3R5 365 aa16.56■□□□□ 0.24
SSX2IP-202ENST00000422026 SYDE2Q5VT97 1194 aa16.56■□□□□ 0.24
SSX2IP-202ENST00000422026 TMEM87AQ8NBN3 555 aa16.56■□□□□ 0.24
SSX2IP-202ENST00000422026 DAGLBQ8NCG7 672 aa16.56■□□□□ 0.24
SSX2IP-202ENST00000422026 BICD2Q8TD16 824 aa16.56■□□□□ 0.24
SSX2IP-202ENST00000422026 ZKSCAN4Q969J2 545 aaPredicted RBP16.56■□□□□ 0.24
SSX2IP-202ENST00000422026 C12orf42Q96LP6 360 aa16.56■□□□□ 0.24
SSX2IP-202ENST00000422026 PIGSQ96S52 555 aa16.56■□□□□ 0.24
SSX2IP-202ENST00000422026 GLIS2Q9BZE0 524 aaPredicted RBP16.56■□□□□ 0.24
SSX2IP-202ENST00000422026 GLT8D2Q9H1C3 349 aa16.56■□□□□ 0.24
SSX2IP-202ENST00000422026 JMJD4Q9H9V9 463 aa16.56■□□□□ 0.24
SSX2IP-202ENST00000422026 RRAGCQ9HB90 399 aa16.56■□□□□ 0.24
SSX2IP-202ENST00000422026 VAT1LQ9HCJ6 419 aa16.56■□□□□ 0.24
SSX2IP-202ENST00000422026 PNMA2Q9UL42 364 aa16.56■□□□□ 0.24
SSX2IP-202ENST00000422026 POLR2AP24928 1970 aaKnown RBP16.56■□□□□ 0.24
SSX2IP-202ENST00000422026 PAPPA2Q9BXP8 1791 aa16.56■□□□□ 0.24
SSX2IP-202ENST00000422026 hCG_1642624A0A1W2PR95 340 aa16.55■□□□□ 0.24
SSX2IP-202ENST00000422026 UBE2Q2LH0YL09 131 aa16.55■□□□□ 0.24
SSX2IP-202ENST00000422026 STXBP3O00186 592 aa16.55■□□□□ 0.24
SSX2IP-202ENST00000422026 NAPAP54920 295 aa16.55■□□□□ 0.24
SSX2IP-202ENST00000422026 DNM1Q05193 864 aaKnown RBP16.55■□□□□ 0.24
SSX2IP-202ENST00000422026 VGLL4Q14135 290 aa16.55■□□□□ 0.24
SSX2IP-202ENST00000422026 TTLL12Q14166 644 aaPredicted RBP16.55■□□□□ 0.24
SSX2IP-202ENST00000422026 SKOR2Q2VWA4 1001 aaPredicted RBP16.55■□□□□ 0.24
SSX2IP-202ENST00000422026 WWC2Q6AWC2 1192 aa16.55■□□□□ 0.24
SSX2IP-202ENST00000422026 TTBK2Q6IQ55 1244 aa16.55■□□□□ 0.24
SSX2IP-202ENST00000422026 NOSTRINQ8IVI9 506 aa16.55■□□□□ 0.24
SSX2IP-202ENST00000422026 SPICE1Q8N0Z3 855 aa16.55■□□□□ 0.24
SSX2IP-202ENST00000422026 PIBF1Q8WXW3 757 aa16.55■□□□□ 0.24
SSX2IP-202ENST00000422026 C6orf50Q9HD87 102 aa16.55■□□□□ 0.24
SSX2IP-202ENST00000422026 TMOD4Q9NZQ9 345 aa16.55■□□□□ 0.24
SSX2IP-202ENST00000422026 PCDHA4Q9UN74 947 aa16.55■□□□□ 0.24
SSX2IP-202ENST00000422026 KCNJ14Q9UNX9 436 aa16.55■□□□□ 0.24
SSX2IP-202ENST00000422026 ZHX2Q9Y6X8 837 aa16.55■□□□□ 0.24
SSX2IP-202ENST00000422026 ELP1O95163 1332 aa16.54■□□□□ 0.24
SSX2IP-202ENST00000422026 FDX1P10109 184 aa16.54■□□□□ 0.24
SSX2IP-202ENST00000422026 SPP2Q13103 211 aa16.54■□□□□ 0.24
SSX2IP-202ENST00000422026 MTMR2Q13614 643 aa16.54■□□□□ 0.24
SSX2IP-202ENST00000422026 ZYXQ15942 572 aaKnown RBP16.54■□□□□ 0.24
SSX2IP-202ENST00000422026 CDC37Q16543 378 aaPredicted RBP16.54■□□□□ 0.24
SSX2IP-202ENST00000422026 RILPL1Q5EBL4 403 aa16.54■□□□□ 0.24
SSX2IP-202ENST00000422026 FAM83BQ5T0W9 1011 aa16.54■□□□□ 0.24
SSX2IP-202ENST00000422026 MYSM1Q5VVJ2 828 aa16.54■□□□□ 0.24
SSX2IP-202ENST00000422026 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.54■□□□□ 0.24
SSX2IP-202ENST00000422026 ZMYND12Q9H0C1 365 aa16.54■□□□□ 0.24
SSX2IP-202ENST00000422026 GJB4Q9NTQ9 266 aa16.54■□□□□ 0.24
SSX2IP-202ENST00000422026 NOL7Q9UMY1 257 aaKnown RBP16.54■□□□□ 0.24
SSX2IP-202ENST00000422026 SNCAIPQ9Y6H5 919 aa16.54■□□□□ 0.24
SSX2IP-202ENST00000422026 MYH15Q9Y2K3 1946 aa16.53■□□□□ 0.24
SSX2IP-202ENST00000422026 SLC16A2P36021 539 aa16.53■□□□□ 0.24
SSX2IP-202ENST00000422026 PPATQ06203 517 aa16.53■□□□□ 0.24
SSX2IP-202ENST00000422026 PRKG1Q13976 671 aa16.53■□□□□ 0.24
SSX2IP-202ENST00000422026 ERO1BQ86YB8 467 aa16.53■□□□□ 0.24
SSX2IP-202ENST00000422026 BLIDQ8IZY5 108 aa16.53■□□□□ 0.24
SSX2IP-202ENST00000422026 GPKOWQ92917 476 aaPredicted RBP eCLIP16.53■□□□□ 0.24
SSX2IP-202ENST00000422026 NUP88Q99567 741 aaPredicted RBP16.53■□□□□ 0.24
SSX2IP-202ENST00000422026 AMNQ9BXJ7 453 aa16.53■□□□□ 0.24
SSX2IP-202ENST00000422026 CPVLQ9H3G5 476 aa16.53■□□□□ 0.24
SSX2IP-202ENST00000422026 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.53■□□□□ 0.24
SSX2IP-202ENST00000422026 CNPY2Q9Y2B0 182 aa16.53■□□□□ 0.24
SSX2IP-202ENST00000422026 BTBD18B2RXH4 712 aa16.52■□□□□ 0.24
SSX2IP-202ENST00000422026 KIF28PB7ZC32 967 aa16.52■□□□□ 0.24
SSX2IP-202ENST00000422026 FIBPO43427 364 aa16.52■□□□□ 0.24
SSX2IP-202ENST00000422026 TRAPPC10P48553 1259 aa16.52■□□□□ 0.24
SSX2IP-202ENST00000422026 QRICH1Q2TAL8 776 aa16.52■□□□□ 0.24
SSX2IP-202ENST00000422026 FOXD4L6Q3SYB3 417 aaPredicted RBP16.52■□□□□ 0.24
SSX2IP-202ENST00000422026 SH3D19Q5HYK7 790 aa16.52■□□□□ 0.24
SSX2IP-202ENST00000422026 MCTP2Q6DN12 878 aa16.52■□□□□ 0.24
SSX2IP-202ENST00000422026 FOXD4L3Q6VB84 417 aaPredicted RBP16.52■□□□□ 0.24
SSX2IP-202ENST00000422026 CCDC84Q86UT8 332 aaPredicted RBP16.52■□□□□ 0.24
SSX2IP-202ENST00000422026 SPATA32Q96LK8 384 aa16.52■□□□□ 0.24
SSX2IP-202ENST00000422026 POLR3EQ9NVU0 708 aa16.52■□□□□ 0.24
SSX2IP-202ENST00000422026 PRR12Q9ULL5 1215 aa16.52■□□□□ 0.24
SSX2IP-202ENST00000422026 AFG3L2Q9Y4W6 797 aa16.52■□□□□ 0.24
SSX2IP-202ENST00000422026 OTOFQ9HC10 1997 aa16.51■□□□□ 0.23
SSX2IP-202ENST00000422026 SMCO2A6NFE2 343 aa16.51■□□□□ 0.23
SSX2IP-202ENST00000422026 SPDYE5A6NIY4 337 aa16.51■□□□□ 0.23
SSX2IP-202ENST00000422026 TRIM75PA6NK02 468 aa16.51■□□□□ 0.23
SSX2IP-202ENST00000422026 YEATS4O95619 227 aa16.51■□□□□ 0.23
SSX2IP-202ENST00000422026 BMP15O95972 392 aa16.51■□□□□ 0.23
SSX2IP-202ENST00000422026 MBD3O95983 291 aa16.51■□□□□ 0.23
SSX2IP-202ENST00000422026 VCAM1P19320 739 aa16.51■□□□□ 0.23
SSX2IP-202ENST00000422026 ADCY7P51828 1080 aa16.51■□□□□ 0.23
SSX2IP-202ENST00000422026 KIAA1755Q5JYT7 1200 aa16.51■□□□□ 0.23
SSX2IP-202ENST00000422026 MAP1SQ66K74 1059 aaPredicted RBP16.51■□□□□ 0.23
SSX2IP-202ENST00000422026 FBXO11Q86XK2 927 aa16.51■□□□□ 0.23
SSX2IP-202ENST00000422026 PRPF38AQ8NAV1 312 aaKnown RBP16.51■□□□□ 0.23
SSX2IP-202ENST00000422026 SLF1Q9BQI6 1058 aa16.51■□□□□ 0.23
SSX2IP-202ENST00000422026 RANBP17Q9H2T7 1088 aaKnown RBP16.51■□□□□ 0.23
SSX2IP-202ENST00000422026 EMILIN3Q9NT22 766 aa16.51■□□□□ 0.23
SSX2IP-202ENST00000422026 RTEL1Q9NZ71 1219 aa16.51■□□□□ 0.23
SSX2IP-202ENST00000422026 CEP131Q9UPN4 1083 aa16.51■□□□□ 0.23
SSX2IP-202ENST00000422026 PHIPQ8WWQ0 1821 aa16.5■□□□□ 0.23
SSX2IP-202ENST00000422026 CXCL11O14625 94 aa16.5■□□□□ 0.23
SSX2IP-202ENST00000422026 PRPF40AO75400 957 aaKnown RBP16.5■□□□□ 0.23
SSX2IP-202ENST00000422026 MRPL12P52815 198 aaKnown RBP16.5■□□□□ 0.23
SSX2IP-202ENST00000422026 PPIL2Q13356 520 aa16.5■□□□□ 0.23
SSX2IP-202ENST00000422026 NPY5RQ15761 445 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms