RNA–Protein interactions for RNA: ENST00000417946.5

CPS1-202, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-202ENST00000417946 CAP2P40123 477 aa7.98□□□□□ -1.13
CPS1-202ENST00000417946 LAPTM4AQ15012 233 aa7.98□□□□□ -1.13
CPS1-202ENST00000417946 RTN1Q16799 776 aa7.98□□□□□ -1.13
CPS1-202ENST00000417946 ABCB5Q2M3G0 1257 aa7.98□□□□□ -1.13
CPS1-202ENST00000417946 CCDC178Q5BJE1 867 aa7.98□□□□□ -1.13
CPS1-202ENST00000417946 NFXL1Q6ZNB6 911 aa7.98□□□□□ -1.13
CPS1-202ENST00000417946 TMTC2Q8N394 836 aa7.98□□□□□ -1.13
CPS1-202ENST00000417946 STAG2Q8N3U4 1231 aa7.98□□□□□ -1.13
CPS1-202ENST00000417946 ACER1Q8TDN7 264 aa7.98□□□□□ -1.13
CPS1-202ENST00000417946 ZC3H15Q8WU90 426 aaKnown RBP7.98□□□□□ -1.13
CPS1-202ENST00000417946 TATDN2Q93075 761 aa7.98□□□□□ -1.13
CPS1-202ENST00000417946 MKL1Q969V6 931 aa7.98□□□□□ -1.13
CPS1-202ENST00000417946 CDCA5Q96FF9 252 aa7.98□□□□□ -1.13
CPS1-202ENST00000417946 AIFM3Q96NN9 605 aa7.98□□□□□ -1.13
CPS1-202ENST00000417946 MAP3K14Q99558 947 aa7.98□□□□□ -1.13
CPS1-202ENST00000417946 NMRK2Q9NPI5 230 aa7.98□□□□□ -1.13
CPS1-202ENST00000417946 NYAP2Q9P242 653 aa7.98□□□□□ -1.13
CPS1-202ENST00000417946 MAD2L2Q9UI95 211 aa7.98□□□□□ -1.13
CPS1-202ENST00000417946 MTMR6Q9Y217 621 aa7.98□□□□□ -1.13
CPS1-202ENST00000417946 SMCHD1A6NHR9 2005 aa7.98□□□□□ -1.13
CPS1-202ENST00000417946 STK36Q9NRP7 1315 aa7.98□□□□□ -1.13
CPS1-202ENST00000417946 ERICH2A1L162 156 aa7.97□□□□□ -1.13
CPS1-202ENST00000417946 USP17L5A8MUK1 530 aa7.97□□□□□ -1.13
CPS1-202ENST00000417946 CYTH3O43739 400 aa7.97□□□□□ -1.13
CPS1-202ENST00000417946 BRD1O95696 1058 aa7.97□□□□□ -1.13
CPS1-202ENST00000417946 TTLL1O95922 423 aa7.97□□□□□ -1.13
CPS1-202ENST00000417946 PDHBP11177 359 aa7.97□□□□□ -1.13
CPS1-202ENST00000417946 SYT1P21579 422 aa7.97□□□□□ -1.13
CPS1-202ENST00000417946 ECE1P42892 770 aa7.97□□□□□ -1.13
CPS1-202ENST00000417946 ICA1Q05084 483 aa7.97□□□□□ -1.13
CPS1-202ENST00000417946 FMR1Q06787 632 aaKnown RBP eCLIP7.97□□□□□ -1.13
CPS1-202ENST00000417946 RAB3GAP1Q15042 981 aa7.97□□□□□ -1.13
CPS1-202ENST00000417946 PKN1Q16512 942 aa7.97□□□□□ -1.13
CPS1-202ENST00000417946 NOL9Q5SY16 702 aaKnown RBP7.97□□□□□ -1.13
CPS1-202ENST00000417946 CATIPQ7Z7H3 387 aa7.97□□□□□ -1.13
CPS1-202ENST00000417946 CMTR1Q8N1G2 835 aaKnown RBP7.97□□□□□ -1.13
CPS1-202ENST00000417946 SRBD1Q8N5C6 995 aaKnown RBP7.97□□□□□ -1.13
CPS1-202ENST00000417946 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.97□□□□□ -1.13
CPS1-202ENST00000417946 NUP133Q8WUM0 1156 aa7.97□□□□□ -1.13
CPS1-202ENST00000417946 PHKBQ93100 1093 aa7.97□□□□□ -1.13
CPS1-202ENST00000417946 KLRG1Q96E93 195 aa7.97□□□□□ -1.13
CPS1-202ENST00000417946 DDX11Q96FC9 970 aa7.97□□□□□ -1.13
CPS1-202ENST00000417946 CHAMP1Q96JM3 812 aa7.97□□□□□ -1.13
CPS1-202ENST00000417946 ZNF341Q9BYN7 854 aa7.97□□□□□ -1.13
CPS1-202ENST00000417946 CPVLQ9H3G5 476 aa7.97□□□□□ -1.13
CPS1-202ENST00000417946 KAT14Q9H8E8 782 aa7.97□□□□□ -1.13
CPS1-202ENST00000417946 KANSL2Q9H9L4 492 aa7.97□□□□□ -1.13
CPS1-202ENST00000417946 CWC22Q9HCG8 908 aaKnown RBP7.97□□□□□ -1.13
CPS1-202ENST00000417946 CHMP5Q9NZZ3 219 aa7.97□□□□□ -1.13
CPS1-202ENST00000417946 CLIP2Q9UDT6 1046 aa7.97□□□□□ -1.13
CPS1-202ENST00000417946 STX8Q9UNK0 236 aa7.97□□□□□ -1.13
CPS1-202ENST00000417946 SMC3Q9UQE7 1217 aa7.97□□□□□ -1.13
CPS1-202ENST00000417946 TRPM7Q96QT4 1865 aa7.97□□□□□ -1.13
CPS1-202ENST00000417946 MPHOSPH10O00566 681 aaKnown RBP7.96□□□□□ -1.14
CPS1-202ENST00000417946 RNF40O75150 1001 aa7.96□□□□□ -1.14
CPS1-202ENST00000417946 USP2O75604 605 aaPredicted RBP7.96□□□□□ -1.14
CPS1-202ENST00000417946 FMNL1O95466 1100 aaPredicted RBP7.96□□□□□ -1.14
CPS1-202ENST00000417946 NDUFB10O96000 172 aa7.96□□□□□ -1.14
CPS1-202ENST00000417946 GOLGA8HP0CJ92 632 aa7.96□□□□□ -1.14
CPS1-202ENST00000417946 CALM1P0DP23 149 aa7.96□□□□□ -1.14
CPS1-202ENST00000417946 CALM2P0DP24 149 aa7.96□□□□□ -1.14
CPS1-202ENST00000417946 CALM3P0DP25 149 aa7.96□□□□□ -1.14
CPS1-202ENST00000417946 VEGFAP15692 232 aaPredicted RBP7.96□□□□□ -1.14
CPS1-202ENST00000417946 ZNF543Q08ER8 600 aa7.96□□□□□ -1.14
CPS1-202ENST00000417946 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.96□□□□□ -1.14
CPS1-202ENST00000417946 MOB2Q70IA6 237 aa7.96□□□□□ -1.14
CPS1-202ENST00000417946 CDC37L1Q7L3B6 337 aa7.96□□□□□ -1.14
CPS1-202ENST00000417946 KRT26Q7Z3Y9 468 aa7.96□□□□□ -1.14
CPS1-202ENST00000417946 USP48Q86UV5 1035 aa7.96□□□□□ -1.14
CPS1-202ENST00000417946 PNMA8AQ86V59 439 aaPredicted RBP7.96□□□□□ -1.14
CPS1-202ENST00000417946 GMCL1P1Q8NEA9 526 aa7.96□□□□□ -1.14
CPS1-202ENST00000417946 GJB4Q9NTQ9 266 aa7.96□□□□□ -1.14
CPS1-202ENST00000417946 NAP1L2Q9ULW6 460 aaPredicted RBP7.96□□□□□ -1.14
CPS1-202ENST00000417946 SYNPO2Q9UMS6 1093 aa7.96□□□□□ -1.14
CPS1-202ENST00000417946 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.96□□□□□ -1.14
CPS1-202ENST00000417946 SNCAIPQ9Y6H5 919 aa7.96□□□□□ -1.14
CPS1-202ENST00000417946 A0A0G2JMZ2 1700 aa7.95□□□□□ -1.14
CPS1-202ENST00000417946 TRAF5O00463 557 aa7.95□□□□□ -1.14
CPS1-202ENST00000417946 ADAMTS3O15072 1205 aa7.95□□□□□ -1.14
CPS1-202ENST00000417946 CTNND1O60716 968 aaKnown RBP7.95□□□□□ -1.14
CPS1-202ENST00000417946 DGKZQ13574 1117 aa7.95□□□□□ -1.14
CPS1-202ENST00000417946 PPP2R5BQ15173 497 aa7.95□□□□□ -1.14
CPS1-202ENST00000417946 NPY5RQ15761 445 aa7.95□□□□□ -1.14
CPS1-202ENST00000417946 MAP3K11Q16584 847 aa7.95□□□□□ -1.14
CPS1-202ENST00000417946 EAPPQ56P03 285 aaPredicted RBP7.95□□□□□ -1.14
CPS1-202ENST00000417946 DCAF15Q66K64 600 aa7.95□□□□□ -1.14
CPS1-202ENST00000417946 MAP1SQ66K74 1059 aaPredicted RBP7.95□□□□□ -1.14
CPS1-202ENST00000417946 OTUD7BQ6GQQ9 843 aa7.95□□□□□ -1.14
CPS1-202ENST00000417946 TTBK2Q6IQ55 1244 aa7.95□□□□□ -1.14
CPS1-202ENST00000417946 USP17L2Q6R6M4 530 aa7.95□□□□□ -1.14
CPS1-202ENST00000417946 SCYL3Q8IZE3 742 aa7.95□□□□□ -1.14
CPS1-202ENST00000417946 ZKSCAN4Q969J2 545 aaPredicted RBP7.95□□□□□ -1.14
CPS1-202ENST00000417946 DCPSQ96C86 337 aaKnown RBP7.95□□□□□ -1.14
CPS1-202ENST00000417946 CHMP4CQ96CF2 233 aa7.95□□□□□ -1.14
CPS1-202ENST00000417946 TRIM34Q9BYJ4 488 aa7.95□□□□□ -1.14
CPS1-202ENST00000417946 RRAGCQ9HB90 399 aa7.95□□□□□ -1.14
CPS1-202ENST00000417946 IL21Q9HBE4 155 aa7.95□□□□□ -1.14
CPS1-202ENST00000417946 RBM28Q9NW13 759 aaKnown RBP7.95□□□□□ -1.14
CPS1-202ENST00000417946 ORC3Q9UBD5 711 aaPredicted RBP7.95□□□□□ -1.14
CPS1-202ENST00000417946 TMX2Q9Y320 296 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms